cluster # 9349

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Oryza sativa
cluster # 9349 cluster # 9349 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9349#0 length = 1669 sequences # 6
consensusID : consensus_9349#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1669
fasta sequence
                              [CCATCTGACATCTTTGCCAAACCCTAACCGCCTCTGGCTCGGCGGCGGCGGCGGCGGCTCGTCCCCGAAGAGCAGCCGGAGTTGGAGAGGATCGGTGTTCCCGCTACGCGGCGGCAAAGATCGATGGTGGACACGGATGAGCGGTGGCGCGCTGCGGTGATTGGCGGTGGTGGAGATGCTGCTACTGCGACGGAGCCTAGTCTGCCCGCCGCGATAACGCGGCGTCTGCGGGAGCTCGCATGGGAGGACAAGGACAAGGAGAAGGCTCGCACGGTCGTTGATCTAGTCGACTCCGAAACCCCTATCGAATGCGATCACGAAGAGGGTCATCTTTGCCCTAGTCCCTGCTCCGACATTCCTTCTATGGTTGCAGCTAGCGGTGGTGGTGGTGGCAATGAAGAGATGGGCAAGGTGAATTGTAATGAGAAGCACACATATGGTGAGGAGAAGGAGAAGGAGAAGGAGAAGGTGGTGGAGACTAAGTCGGAGC-TGAAGCCTAAACCGAGGAGGAAGAATTGGGAGGAGGAGGAGCTCACA-TGGG-AGGAGAAGGTG-TTGAAGGTTCTTCACATGGTTCGTATATGGGAGGTGACTGAATTCGACCCCAAGATGGAGTGGTTTGAGCCTACCCGCCTTTGCCTCTTCAACACCGCCTTCTTCGACCTCGACAAAGAGTCTAAGGCTGGGCTTGGGCCACCGATTCACTCGCTCACTTCCTCTGATTATCGCCATTTGGAGACCTCCATGAATATCATTTCAATCAAGGTTGTCGAATCTGACGTGGGTTACCCTATCAGCATCTTCGGCACCGTGTTAGCGAGAGATCAGTATGACTATAGGTGTGTGTATTTGTTCAGGCGTAGCAGGGACGATCCCCAGATCATCACCTCACCGGAGGACATGCTAACTTTGACAGGCCCAAAGCGAGGTCTTGGTGCAAAAGATTATATGTTTTTCGAGTTCAATTTAAAGATGAAGGGCGATGATGGAGTTGACAAAGATTTTAGCAAAGGTTTGCTGCCATACAATGTCGTCTGTCGAACAGGGAGACTCGAGACTTTACATCTCAGGAGCTGGCTAAGTGTAGTGGAATTTGCATTCGTGACTGTTCAATATGCCGTTGAAGCTACCCTTGCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTGATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCATTGGATAAGGAGCTGGTGCTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCAAAGCTTTGAGTTCATTCTAGGGCACTATGATGAAGAATTTACCTGCA-AGCAAGGCTGTTATGAGTTTCAAGTTAATATTATTTGGACGGCAGTAAAGACTCGGCGACGGCCCAATATGTGGAAGCGCA-TTGGTTGCA-TTGTACTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCACT-CAAAACATATCTATCTATCCATAAAATTTCCTAAGAATATTCTCTTAGATATGTATTGCTAGTCTCAGTCTGTAAATGATGATCACGCTTATCTTAATTAGACACATG]

[+] EMBL AK073987             [CCATCTGACATCTTTGCCAAACCCTAACCGCCTCTGGCTCGGCGGCGGCGGCGGCGGCTCGTCCCCGAAGAGCAGCCGGAGTTGGAGAGGATCGGTGTTCCCGCTACGCGGCGGCAAAGATCGATGGTGGACACGGATGAGCGGTGGCGCGCTGCGGTGATTGGCGGTGGTGGAGATGCTGCTACTGCGACGGAGCCTAGTCTGCCCGCCGCGATAACGCGGCGTCTGCGGGAGCTCGCATGGGAGGACAAGGACAAGGAGAAGGCTCGCACGGTCGTTGATCTAGTCGACTCCGAAACCCCTATCGAATGCGATCACGAAGAGGGTCATCTTTGCCCTAGTCCCTGCTCCGACATTCCTTCTATGGTTGCAGCTAGCGGTGGTGGTGGTGGCAATGAAGAGATGGGCAAGGTGAATTGTAATGAGAAGCACACATATGGTGAGGAGAAGGAGAAGGAGAAGGAGAAGGTGGTGGAGACTAAGTCGGAGC TGAAGCCTAAACCGAGGAGGAAGAATTGGGAGGAGGAGGAGCTCACA TGGG AGGAGAAGGTG TTGAAGGTTCTTCACATGGTTCGTATATGGGAGGTGACTGAATTCGACCCCAAGATGGAGTGGTTTGAGCCTACCCGCCTTTGCCTCTTCAACACCGCCTTCTTCGACCTCGACAAAGAGTCTAAGGCTGGGCTTGGGCCACCGATTCACTCGCTCACTTCCTCTGATTATCGCCATTTGGAGACCTCCATGAATATCATTTCAATCAAGGTTGTCGAATCTGACGTGGGTTACCCTATCAGCATCTTCGGCACCGTGTTAGCGAGAGATCAGTATGACTATAGGTGTGTGTATTTGTTCAGGCGTAGCAGGGACGATCCCCAGATCATCACCTCACCGGAGGACATGCTAACTTTGACAGGCCCAAAGCGAGGTCTTGGTGCAAAAGATTATATGTTTTTCGAGTTCAATTTAAAGATGAAGGGCGATGATGGAGTTGACAAAGATTTTAGCAAAGGTTTGCTGCCATACAATGTCGTCTGTCGAACAGGGAGACTCGAGACTTTACATCTCAGGAGCTGGCTAAGTGTAGTGGAATTTGCATTCGTGACTGTTCAATATGCCGTTGAAGCTACCCTTGCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTGATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCATTGGATAAGGAGCTGGTGCTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCAAAGCTTTGAGTTCATTCTAGGGCACTATGATGAAGAATTTACCTGCA AGCAAGGCTGTTATGAGTTTCAAGTTAATATTATTTGGACGGCAGTAAAGACTCGGCGACGGCCCAATATGTGGAAGCGCA TTGGTTGCA TTGTACTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCACT CAAAACATATCTATCTATCCAT                                                                                      ]
[+] EMBL AK105436             [   TCTGACATCTTTGCCAAACCCTAACCGCCTCTGGCTCGGCGGCGGCGGCGGCGGCTCGTCCCCGAAGAGCAGCCGGAGTTGGAGAGGATCGGTGTTCCCGCTACGCGGCGGCAAAGATCGATGGTGGACACGGATGAGCGGTGGCGCGCTGCGGTGATTGGCGGTGGTGGAGATGCTGCTACTGCGACGGAGCCTAGTCTGCCCGCCGCGATAACGCGGCGTCTGCGGGAGCTCGCATGGGAGGACAAGGACAAGGAGAAGGCTCGCACGGTCGTTGATCTAGTCGACTCCGAAACCCCTATCGAATGCGATCACGAAGAGGGTCATCTTTGCCCTAGTCCCTGCTCCGACATTCCTTCTATGGTTGCAGCTAGCGGTGGTGGTGGTGGCAATGAAGAGATGGGCAAGGTGAATTGTAATGAGAAGCACACATATGGTGAGGAGAAGGAGAAGGAGAAGGAGAAGGTGGTGGAGACTAAGTCGGAGC TGAAGCCTAAACCGAGGAGGAAGAATTGGGAGGAGGAGGAGCTCACA TGGG AGGAGAAGGTG TTGAAGGTTCTTCACATGGTTCGTATATGGGAGGTGACTGAATTCGACCCCAAGATGGAGTGGTTTGAGCCTACCCGCCTTTGCCTCTTCAACACCGCCTTCTTCGACCTCGACAAAGAGTCTAAGGCTGGGCTTGGGCCACCGATTCACTCGCTCACTTCCTCTGATTATCGCCATTTGGAGACCTCCATGAATATCATTTCAATCAAGGTTGTCGAATCTGACGTGGGTTACCCTATCAGCATCTTCGGCACCGTGTTAGCGAGAGATCAGTATGACTATAGGTGTGTGTATTTGTTCAGGCGTAGCAGGGACGATCCCCAGATCATCACCTCACCGGAGGACATGCTAACTTTGACAGGCCCAAAGCGAGGTCTTGGTGCAAAAGATTATATGTTTTTCGAGTTCAATTTAAAGATGAAGGGCGATGATGGAGTTGACAAAGATTTTAGCAAAGGTTTGCTGCCATACAATGTCGTCTGTCGAACAGGGAGACTCGAGACTTTACATCTCAGGAGCTGGCTAAGTGTAGTGGAATTTGCATTCGTGACTGTTCAATATGCCGTTGAAGCTACCCTTGCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTGATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCATTGGATAAGGAGCTGGTGCTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCAAAGCTTTGAGTTCATTCTAGGGCACTATGATGAAGAATTTACCTGCA AGCAAGGCTGTTATGAGTTTCAAGTTAATATTATTTGGACGGCAGTAAAGACTCGGCGACGGCCCAATATGTGGAAGCGCA TTGGTTGCA TTGTACTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCACT CAAAACATATCTATCTATCCATAAAATTTCCTAAGAATATTCTCTTAGATATGTATTGCTAGTCTCAGTCTGTAAATGATGATCACGCTTATCTTAATTAGACACATG]
[+] EMBL AU030163             [                                                                                                                                                                                                                                                                gnGAGAAGGCTCGCACGGTCGTTGATCTAGTCGACTCCGAAACCCCTATCGAATGCGATCACGAAGAGGGTCATCTTTGCCCTAGTCCCTGCTCCGACATTCCTTCTATGGTTGCAGCTAGCGGTGGTGGTGGTGGCAATGAAGAGATGGGCAAGGTGAATTGTAATGAGAAGCACACATATGGTGAGGAGAAGGAGAAGGAGAAGGAGAAGGTGGTGGAGACTAAGTCGGAGCTTGAAGCCTAAACCGAGGAGGAAGATTTGGGAGGAGGAGGAGCTCACATTGGGAAGGAG AGGTGTTTGAAGG TCTTCA ATNGTTTGTATATTGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU030164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            agtnAAGGCCGATGATGGAGTTG CAAAGATTTTAGCAA  GNTTGCTNCCATACAATGTCGTCTGTCGAACAGGGAGACTCGAGACTTTACATCTCAGGAGCTGGCTAAGTGTAGTGGAATTTGCATTCGTGACTGTTCAATATGCCNTTGAAGCTA CCTTGCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTGATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCATTGGATAAGGAGCTGGTGCTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCAAAGCTTTGAGTTCATTCTAGGGCACTATGATGAAGAATTTACCTGCA AGCAAGGCTGTTATGAGTTTCAAGTTAATATTATTTGGACGGCAGTAAAGACTCGGCGACGGCCCAATATGTGGAAGCGCA TTGGTTGCA TTGTACTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCACT CAAAACATATCTATCTATCCATAAAATTTCCTAAGAATATTCTCTTAGATATGTATTGCTAGTCTCAGTCTGTAAATGATGATCACGCTTATCTTAATTAGACAaaaa]
[+] EMBL CA999662             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CATTCGTGACTGTTCAATATGCCGTTGAAGCTACCCTTGCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL BQ908392             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCTTCCGGTGAAAATGTTAGGGGGGGCATCTGTTTTCACTGGCAGAGTGACTGCTTGGACTACTGGAAATGATGAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCTGATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCCTTGGATAAGGAGCTGGTGCTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCCAAGCTTTGAGTTCATTCTAGGGCACTATGATGAAGAATTTACCTGCACAGCAAGGCTGTTATGAGTTTCAAGTTAATATTATTTGGACACCNGTAAAGACTCGGCGACGGCCC ATATGTGGAAGCGCACTTGGTTGCACTTGTACTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCACTCCAAAACATATCTATCTATCCATAAAATTTCCTAAAAAaaaaa                                                                  ]




>consensus_9349#0
CCATCTGACATCTTTGCCAAACCCTAACCGCCTCTGGCTCGGCGGCGGCGGCGGCGGCTC
GTCCCCGAAGAGCAGCCGGAGTTGGAGAGGATCGGTGTTCCCGCTACGCGGCGGCAAAGA
TCGATGGTGGACACGGATGAGCGGTGGCGCGCTGCGGTGATTGGCGGTGGTGGAGATGCT
GCTACTGCGACGGAGCCTAGTCTGCCCGCCGCGATAACGCGGCGTCTGCGGGAGCTCGCA
TGGGAGGACAAGGACAAGGAGAAGGCTCGCACGGTCGTTGATCTAGTCGACTCCGAAACC
CCTATCGAATGCGATCACGAAGAGGGTCATCTTTGCCCTAGTCCCTGCTCCGACATTCCT
TCTATGGTTGCAGCTAGCGGTGGTGGTGGTGGCAATGAAGAGATGGGCAAGGTGAATTGT
AATGAGAAGCACACATATGGTGAGGAGAAGGAGAAGGAGAAGGAGAAGGTGGTGGAGACT
AAGTCGGAGCTGAAGCCTAAACCGAGGAGGAAGAATTGGGAGGAGGAGGAGCTCACATGG
GAGGAGAAGGTGTTGAAGGTTCTTCACATGGTTCGTATATGGGAGGTGACTGAATTCGAC
CCCAAGATGGAGTGGTTTGAGCCTACCCGCCTTTGCCTCTTCAACACCGCCTTCTTCGAC
CTCGACAAAGAGTCTAAGGCTGGGCTTGGGCCACCGATTCACTCGCTCACTTCCTCTGAT
TATCGCCATTTGGAGACCTCCATGAATATCATTTCAATCAAGGTTGTCGAATCTGACGTG
GGTTACCCTATCAGCATCTTCGGCACCGTGTTAGCGAGAGATCAGTATGACTATAGGTGT
GTGTATTTGTTCAGGCGTAGCAGGGACGATCCCCAGATCATCACCTCACCGGAGGACATG
CTAACTTTGACAGGCCCAAAGCGAGGTCTTGGTGCAAAAGATTATATGTTTTTCGAGTTC
AATTTAAAGATGAAGGGCGATGATGGAGTTGACAAAGATTTTAGCAAAGGTTTGCTGCCA
TACAATGTCGTCTGTCGAACAGGGAGACTCGAGACTTTACATCTCAGGAGCTGGCTAAGT
GTAGTGGAATTTGCATTCGTGACTGTTCAATATGCCGTTGAAGCTACCCTTGCGGTGAAA
ATGTTAGGGGGGGCATCTGTTTTCACTGGTAGAGTGACTGCTTGGACTACTGGAAATGAT
GAAGATGAAATAGTTCTCTATGACAGTGAAGTTGCAGACACTCGGACAGAGATTACAGCT
GATGGATCTGTTCAGCTAAATCGTGGTTTAGTAGTTGTCCCATTGGATAAGGAGCTGGTG
CTCAATATTTGTGTGTTTGAGGGTGAAGATGAAGCTCAAAGCTTTGAGTTCATTCTAGGG
CACTATGATGAAGAATTTACCTGCAAGCAAGGCTGTTATGAGTTTCAAGTTAATATTATT
TGGACGGCAGTAAAGACTCGGCGACGGCCCAATATGTGGAAGCGCATTGGTTGCATTGTA
CTGTTACTTTGAAGGCTGTAAAAAGGGTGCACTTATCAGAGTCATATATGATCGGTGCAC
TCAAAACATATCTATCTATCCATAAAATTTCCTAAGAATATTCTCTTAGATATGTATTGC
TAGTCTCAGTCTGTAAATGATGATCACGCTTATCTTAATTAGACACATG
clustalw multiple alignements is not computed in this case