These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9350#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1326 fasta sequence [AGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGAAGTTACAATGGCATGGATCTAAAAAAAAAAAAAAAA] [+] EMBL CB629924 [AGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGT ] [+] EMBL AU030250 [ GAGATNACCGCCCCCTCACNGGCTGCTCCTTCTCTCGAGATTTTTCAATNCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCNGGAGATTGTGGGACGTTAGCACNGGAAAGG ACTTCTACNCCAAGAA GGNACAGCAGAAGTGNCTATGGAG TANC TTCACCCA ] [-] EMBL CB629925 [ TGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTT ] [-] EMBL CA762186 [ CTTAAGCTGCATCTTGTGGACTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGCCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGAAGTTACAATGGCATGGATCTAAAAAAAAAAAAAAAA] [+] EMBL AU030251 [ TGTGAA CCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGANGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCNGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTNGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGNAGTTNCAAaaaa ] [-] EMBL D43050 [ ncCACATG CAAGTTTG ACCCCA GAAGGCTATTATTTGGC AC NCNGCCTAT ACACCAAAGCAGCACTGTGGTCAGCCCGTGATTACAAACCAATCAAGAG TTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGANCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||