cluster # 9350

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Oryza sativa
cluster # 9350 cluster # 9350 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9350#0 length = 1326 sequences # 6
consensusID : consensus_9350#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1326
fasta sequence
                              [AGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGAAGTTACAATGGCATGGATCTAAAAAAAAAAAAAAAA]

[+] EMBL CB629924             [AGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGCGCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGCGCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGGCGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCTCCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCTGGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU030250             [                                                                                                                                                                                                                     GAGATNACCGCCCCCTCACNGGCTGCTCCTTCTCTCGAGATTTTTCAATNCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGTGGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTGATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCAAACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTGCTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCNGGAGATTGTGGGACGTTAGCACNGGAAAGG ACTTCTACNCCAAGAA GGNACAGCAGAAGTGNCTATGGAG TANC TTCACCCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CB629925             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAAGTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTT                                       ]
[-] EMBL CA762186             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CTTAAGCTGCATCTTGTGGACTTGATGCGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATGTGAAGCCTGCCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGAAGTTACAATGGCATGGATCTAAAAAAAAAAAAAAAA]
[+] EMBL AU030251             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGTGAA CCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGANGTGAAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAGCACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAACTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGAGTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCNGGGCACAAGATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTNGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCCTGGGTTTGCATCCCTGGTTTTGNAGTTNCAAaaaa                        ]
[-] EMBL D43050               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ncCACATG CAAGTTTG ACCCCA GAAGGCTATTATTTGGC AC NCNGCCTAT ACACCAAAGCAGCACTGTGGTCAGCCCGTGATTACAAACCAATCAAGAG TTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGATTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAGATAATGCCATGGANCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTACATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATATGTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACCCCTGTCC                                                           ]




>consensus_9350#0
AGGAGGAGCAGATCCAGTACCCCTTCTTCACCGAGGGCACGCAGGAGCTTCTCAAGGCGC
GCGTCGACATCGCGCAGTACTCGCTGCCCCGAGCCAAGGCCAGGATAGAGCGGGCCAAGC
GCTGCCATGACGACCCCGACGAGGACCCTGAGGCAGAGGCCAACCTTGTCGTTAAGCAGG
CGGAGGATTTCGTGCTTGAGTGCAGCGAGATTGGAGATGACCGCCCCCTCACCGGCTGCT
CCTTCTCTCGAGATTTTTCAATGCTCGCTACAAGTTCATGGAGTGGGATGATCAAAGTGT
GGAGTATGCCACAAGTAACTAAAATTGCAACTCTGAAAGGTCACACAGAACGTGCAACTG
ATGTTGCGTTTTCACCAGTTGACGACTGCTTAGCAACAGCTTCAGCTGATAAAACTGCCA
AACTATGGAAGACCGATGGGTCACTCTTATTGTCCTTTGATGGTCACCTCGATCGGCTTG
CTCGCCTTGCTTTTCATCCATCTGGAGGGTACCTTGCTACAGCTAGCTTTGACAAAACCT
GGAGATTGTGGGACGTTAGCACTGGAAAGGAACTTCTACTCCAAGAAGGGCACAGCAGAA
GTGTCTATGGAGTTAGCTTTCACCCAGATGGTTCTTTAGCTGCATCTTGTGGTCTTGATG
CGTATGCTCGAGTTTGGGATTTAAGATCAGGAAGATTGTGGGGCACACTCATGGGACATG
TGAAGCCTGTCTTAGGAGTGAGCTTCTCCCCTAATGGTTATCTGGTTGCAACTGGAAGTG
AAGACAATTTCTGTCGAATATGGGATTTGAGGACTAAAAGAATGTTATATTCTATACCAG
CACATAAGAGTCTTATCTCACATGTCAAGTTTGAACCCCAGGAAGGCTATTATTTGGCAA
CTTCGTCCTATGACACCAAAGCAGCACTGTGGTCAGCTCGTGATTACAAACCAATCAAGA
GTTTGGTGGCCCATGAGTCAAAGGTTACTAGTTTGGATATTAGTGGAGATGGACAGCAGA
TTGTGACTGTGTCACATGATAGAACGATCAAGATTTGGTCCTGCAGAAGCAGGGCACAAG
ATAATGCCATGGAGCTGGACTGAGGCACTGAATTAACTTGTTAGAAGTTGTCAGCATCTA
CATGAAGCCATCTTGTAGTTGTAGCACCTCATAGCCCTTAGCCTGTGAAATGTTTCATAT
GTAACTCTTCTACTTGACGTTGTAGAAAATTTACGATCGAACGGCTTAGGGGCGATTACC
CCTGTCCTGGGTTTGCATCCCTGGTTTTGAAGTTACAATGGCATGGATCTAAAAAAAAAA
AAAAAA
clustalw multiple alignements is not computed in this case