These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9351#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 990 fasta sequence [CGGGGTAGCGCAAATGGGCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGAAAAGAATC] [+] EMBL AU095038 [CGGGGTAGCGCAAATGGGCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAG NNCATTCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGNGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAA CACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTC AAACTACCTGTTCG ACTTGGCCGAT CTATGGAAACAGATGGAGGGATAAAATTATTTAAAA GNT CACCTGGCATCAG ATGGATncat ] [+] EMBL AK069630 [ GCGGCGGCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGATATGAATC] [+] EMBL AU166770 [ GCGGCGGCGGGAGGCCGACGGCGAGCGGGGCGAACAGCAGCAGCAGCAGCGATGATGACGGGGACGCCGCCTGGAAGGCGGCCATCGAATCCATCGCCGCCGTGGGTTTCGGCCTGCCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGAC ] [+] EMBL AK099768 [ atagcacaCGCGAGATTCGGGGTAGCGCTGTCCAACGGCGCGGCGAAGGCCACCTCTGGCGGCGGCGGCGAGGCCAGCCACGGCGTGGAGCAGCAGCCGCCGCAGGAGGGGAAGGCGCAAGCACCTGGGCTTAAGCTTTACCAGATCAAGGTAAGGAACATGTTGGACAACATGTTAGAGAAAAACCTTGAAATAGTCAAAACTACCTGTTCGAACTTGGCCGATCCTATGGAAACAGATGGAGGGATAAAATTATTTAAAAAGGCTCCACCTGGCATCAGAATGGATGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATGTCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATGTCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTA ] [+] EMBL AU030253 [ TGCCATGGATAAATACCATGTGCAACTGAAGAGACCAAGAATTCTGCCTGGAACAGATATCGATGAGAAATCCAAGAAGTTCAGGCATATGCTTAAGTCTGTTGCTGTTGATGGCAATGATATACTTGTTTCCGCAAAGAAATCATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGTACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGNATTAaaaaaaaaa ] [+] EMBL AU166771 [ ATCAGAAAGATCATTGGCTAGATTGGAAGCAAGAGAAGCTGCAGCGAAGGCAGCAGCCAAGAGGGAAGAAGAAAGGGTGCGGGAACTGAAGAAGACTAGGGGAGAGAAATGGCTTCCTTCAATTGCTAGACAAATGAAGGAAGAAAAAGCTTGGGAGCAACGGAAGTGATGATGCCACCATCATATCAATAGGGGNACCTGTGCTAATCTCTGATGCCATCATCGGCACTTCGGCAGTGACCTTCTTCACTTTCTGTCTATGACAAGGGACAGTAGATAGATCATAGATTAATGGATGATTTTGCGTAGCTGATAATTCAGTTCTGGATGTCAGCATTGCTCTGATCCCTATATGGGCCTTCTTTGTAGACAATTTTGTATTGTAACATTCCAGGATCTTGTGTGATGAAAGTAGCGTATGTATGCATTATTTGGAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||