cluster # 9353

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Oryza sativa
cluster # 9353 cluster # 9353 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9353#0 length = 1430 sequences # 6
consensusID : consensus_9353#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1430
fasta sequence
                              [CACAAATTCGATTCACCCCCCAATCGCTGGCGCCTTTGACTCCCGCCGCGGGCGGCGCAGCGCAGCCGATGGGGATCCCCGCCGCCTCAGTCGCGGCCCGGACAGCCGTCGGCGCGGCGCTGGCCGCCGTCATCGCCGCGCGCGCCGTCCGCCGCCGCTCGCTGGACGGCTCCGGCGGGGCAGCCGGGTTCGTCGTCATGGCGATCCACCTCGCCTGCGGGTACAGGTACGGCGCGCTCGTGCTGGCCTTCTTCTTCACCTCGTCCAAGGCGACCAAGATCGGCGCGGACAGGAAGCGCCGCATCGAGGACGACTTCAAGGAGGGCGGCCAGCGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT-GGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGCTTGGCAGTCTGATTGATTCAGTG-TTGGGTGCC-ACACT-CCA-GTT-CAGTGGATACTGCAGTGTT-CGGAAGAAGG-TGGTCAGTAAACGGGG-CCCTACAGT-CACCAAGATTTCTGGAATGACTAT-CCTGGATAATGATGCGGTTAATGC-TGTATCTGT-GCTACT-AACA-ACTGCGGTT-ACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTT-TTT-ACTCAAGTT-TCTT-CCAAACACCCAATTCCATTCA-AAGGTGTCAAGGCATGGCCCCAAGA-CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT-ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT-CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAAAA]

[+] EMBL AK099867             [CACAAATTCGATTCACCCCCCAATCGCTGGCGCCTTTGACTCCCGCCGCGGGCGGCGCAGCGCAGCCGATGGGGATCCCCGCCGCCTCAGTCGCGGCCCGGACAGCCGTCGGCGCGGCGCTGGCCGCCGTCATCGCCGCGCGCGCCGTCCGCCGCCGCTCGCTGGACGGCTCCGGCGGGGCAGCCGGGTTCGTCGTCATGGCGATCCACCTCGCCTGCGGGTACAGGTACGGCGCGCTCGTGCTGGCCTTCTTCTTCACCTCGTCCAAGGCGACCAAGATCGGCGCGGACAGGAAGCGCCGCATCGAGGACGACTTCAAGGAGGGCGGCCAGCGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT GGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGCTTGGCAGTCTGATTGATTCAGTG TTGGGTGCC ACACT CCA GTT CAGTGGATACTGCAGTGTT CGGAAGAAGG TGGTCAGTAAACGGGG CCCTACAGT CACCAAGATTTCTGGAATGACTAT CCTGGATAATGATGCGGTTAATGC TGTATCTGT GCTACT AACA ACTGCGGTT ACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTT TTT ACTCAAGTT TCTT CCAAACACCCAATTCCATTCA AAGGTGTCAAGGCATGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCA                         ]
[+] EMBL AU065683             [                                                                                                                                                                                                                                                                                                                                            CGCAACTGGATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGT GGAGTGACCTTACAA GCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGAC  TTG TTTTGTTGGACTGTTGACTGTGGAGTGCTCA TTGACGTGGCTCTTCGACAGCTTCTAGTAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CF310334             [                                                                                                                                                                                                                                                                                                                                                     ATCCAAGTCCTAGCAAATAGCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAATGCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACTATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGCCACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGTNGGAGTGACCTTACAAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTGGACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCATCTCTGCTACTGCTGGTTTGTTTGGCAGTCTGATTGATTCAGTGTTTGGGTGCC ACACT CCAGGTT CAGTGGATACTGCAGTGTT CGGAAGAAGG TGGTCAGTAAACGGGG CCCTACAGT CACCAAGATTTCTGGAATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AU030377             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TGTCANTCTGA TGATCCNGTG TTGGGTCCCNANACTCCCA GTTCCAGTGGATACTGCAGTGTTCCGGAAGAAGGTTGNCCCNTAAACGGGGCCCCTACAGTCCCCCAAGATTTCNGGAATGANTATCCCTGGATAATGATGCGGTTAATGC TGTACCTGT GCTACT AACA ACTGCGGTT ACAGCTTATGCGTGCATTCGCNTCTTTTGAAGATCTT TTT ACTCAAGTT TCTT CCAACCACCCAATTCCATTCA AAGGTGTCAAGGCNTGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAA  ]
[+] EMBL BI805775             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CAGT CACCAAGAGTTCTGGAATGACTAT CCT GATAAT ATGCGGTTAATGCGTGTATCTGTGGCTACTGAACATACGGCGGTTGACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTTGTTTGACTCAAGTTGTCTTCCCANACACCCCATTCCATTCACAAGGTGTCAAGGCATGGCCCCCAGACCCATGAAATGATGGATTAGGCNTTTTGGCTGCTTGATGAGNAAGATTC ATTCACTC ACGTTGTTCACTACTCCCAGAAAAACCTTGTTTGGTTGGTTGGTGCTACCNCNAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTTGACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGAT GCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACCAAGCTGTTTGGGACCAAGGAAAGCTGCTGCTGATTTCCCTTNGGAAATGGTCCAATCCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTG          ]
[-] EMBL CF310335             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCAAGGCATGGCCCCAAGA CAATGAAATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTCACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAGTTGTCTAAGCATATACAGTT ACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGACTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGGCTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCATACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTT CCTTTGGAAATGGTGCAAATCCTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAAAA]




>consensus_9353#0
CACAAATTCGATTCACCCCCCAATCGCTGGCGCCTTTGACTCCCGCCGCGGGCGGCGCAG
CGCAGCCGATGGGGATCCCCGCCGCCTCAGTCGCGGCCCGGACAGCCGTCGGCGCGGCGC
TGGCCGCCGTCATCGCCGCGCGCGCCGTCCGCCGCCGCTCGCTGGACGGCTCCGGCGGGG
CAGCCGGGTTCGTCGTCATGGCGATCCACCTCGCCTGCGGGTACAGGTACGGCGCGCTCG
TGCTGGCCTTCTTCTTCACCTCGTCCAAGGCGACCAAGATCGGCGCGGACAGGAAGCGCC
GCATCGAGGACGACTTCAAGGAGGGCGGCCAGCGCAACTGGATCCAAGTCCTAGCAAATA
GCTTAATAGCTACTATATTGGTCATCATATTGGCAACAATGACCGGAGGACAAGATCAAT
GCCTGGACTCCCATGAGTCAAAGGTTATAACTGGTATTATTGGTGGCATCATTGGTCACT
ATTGCTGCTGCAATGGAGATACTTGGTCATCCGAACTTGGTGTGCTTAGTGATGAACAGC
CACGTCTTATTACTACTCTGAAGCCTGTCAGGAAAGGTACAAACGGTGGAGTGACCTTAC
AAGGCCTTCTTGCTGCCACAGCAGGTGGCCTAATCATAGGTCTGACTTTTGTTTTTGTTG
GACTGTTGACTGTGGAGTGCTCATTTGACGTGGCTCTTCGACAGCTTCTAGTAATACCCA
TCTCTGCTACTGCTGGTTTGCTTGGCAGTCTGATTGATTCAGTGTTGGGTGCCACACTCC
AGTTCAGTGGATACTGCAGTGTTCGGAAGAAGGTGGTCAGTAAACGGGGCCCTACAGTCA
CCAAGATTTCTGGAATGACTATCCTGGATAATGATGCGGTTAATGCTGTATCTGTGCTAC
TAACAACTGCGGTTACAGCTTATGCGTGCATTCGCATCTTTTGAAGATCTTTTTACTCAA
GTTTCTTCCAAACACCCAATTCCATTCAAAGGTGTCAAGGCATGGCCCCAAGACAATGAA
ATGATGGATTAGGCATTTTGGCTGCTTGATGAGAAAGATTCAATTCACTCAACGTTGTTC
ACTACTCCAAGAAAAACATTGTTTGGTTGGTTGGTGCTACCGCAAGCTGAAAAGTGTCAG
TTGTCTAAGCATATACAGTTACCCTACTTAATGTGAAAGTGATAAGCTGGATAGTCCTGA
CTCCTGAACCCTATTTTCTGCTGAGCTAAGGATTGTGGACTTTCGTCGTGTGGATGATGG
CTGTTGTTATTTCTGTACTGACCTAAGGATTTGTTGACTTAGCTGTGTGAGTTTTTCCAT
ACAAAGCTGTTTGGGACAAAGGAAAGCTGCTGCTGATTTCCTTTGGAAATGGTGCAAATC
CTCCATTTTAATGAGAAATAAAGCATCCAGTGTCTATGTGTCAAAAAAAA
clustalw multiple alignements is not computed in this case