cluster # 9359

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Oryza sativa
cluster # 9359 cluster # 9359 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9359#0 length = 3167 sequences # 5

consensus_9359#1 length = 609 sequences # 1

consensusID : consensus_9359#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3167
fasta sequence

                              [CGGTGGAGGGAAAAGCACCGAAAAGCGCGGCCTTTTTTTCTTCTTTTTTTCCCTCCCTTGTTCTTCCCCACACTCCACTCCACTCCTCGCATCGCATCCCATCCATGGCCGCCTCCGCCGTCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCGGCGGCGTCCGCGGCCGTGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGGATCCTCATCTCCGGCTCCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTGATAGAGAAGGCCAAGGACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATGATGAAGTCGGAAGGGCTCTTTGAATGGCAAGGAGGGCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCCAATTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCAAATAAACCTCACAAACCTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTTGGTATTCCAGTTCCACATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATCCAGAAGGGTGGCTCTTTTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGCACAGCTGGTGGCCCATTCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATATGGTTTGTTGAGAGAACCAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTTTGTGAACCTGCCTTGGTTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAGTCATCAGTTTTTAGATCAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAAGTATCTTATGCAAGGGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCTCCCAGACTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGATGAAAATGGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTTTGGTGAGGATCCACTTACAACAGTAGGATTACTGGAACAAA-TAAATGTGACGAGGGATAACACAGACTACTTATGGTATACCACATA-TGTCGATG-TTGCCCAGGATGAGCAGTTCC-TTAGCAATGGGGA-GAATCTCAAGCTTAC-TGTGA-TGTCAGCTGGTCATGCTTTGCATATTTTCATTAATGGACAACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTGACTTATACTGGGAATGTGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATAGCAGTTGGCCTCCCAAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGCCCAGTGACGCTTGATGGCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACTTATCAGGTAGGACTGAAAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTGGGGAGAACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGATGGTGATGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAATGGACAAGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGTGGAACCTGTGATTATCGAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGACTCTTCTCAGAGATGGTA-CCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTGGTCATATTCGAGGAGTGGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATCGGAAGTGTCTGCGCTGATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAAGACTACGAGAAAGCAAAAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATAAAATTTGCTAGCTTTGGCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGCCATGCGCACAAGTCGTACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGGGTAAGCGTTGTTCCAGAAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCTGTTGTTGAGGCTATATGCGGTTGAGAACCGCAAACTCAGATCCTCCCAAATCATCCTATATCTTAGTTTCGACACGGTTTTCGGCTTACCGACCTTCTGGCAAGAGGTGAAAGTCACAGCAACAGTGA-CGCACGGACCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATTCTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAAACCAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCATAGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAGGATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTGCAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATTAGCTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTTATTCAACCGTATGTGAATGAATTCTCTCAGGTGGTCATCTCAATGCCCACTTGAT]

[+] EMBL AK103045             [CGGTGGAGGGAAAAGCACCGAAAAGCGCGGCCTTTTTTTCTTCTTTTTTTCCCTCCCTTGTTCTTCCCCACACTCCACTCCACTCCTCGCATCGCATCCCATCCATGGCCGCCTCCGCCGTCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCGGCGGCGTCCGCGGCCGTGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGGATCCTCATCTCCGGCTCCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTGATAGAGAAGGCCAAGGACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATGATGAAGTCGGAAGGGCTCTTTGAATGGCAAGGAGGGCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCCAATTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCAAATAAACCTCACAAACCTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTTGGTATTCCAGTTCCACATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATCCAGAAGGGTGGCTCTTTTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGCACAGCTGGTGGCCCATTCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATATGGTTTGTTGAGAGAACCAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTTTGTGAACCTGCCTTGGTTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAGTCATCAGTTTTTAGATCAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAAGTATCTTATGCAAGGGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCTCCCAGACTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGATGAAAATGGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTTTGGTGAGGATCCACTTACAACAGTAGGATTACTGGAACAAA TAAATGTGACGAGGGATAACACAGACTACTTATGGTATACCACATA TGTCGATG TTGCCCAGGATGAGCAGTTCC TTAGCAATGGGGA GAATCTCAAGCTTAC TGTGA TGTCAGCTGGTCATGCTTTGCATATTTTCATTAATGGACAACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTGACTTATACTGGGAATGTGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATAGCAGTTGGCCTCCCAAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGCCCAGTGACGCTTGATGGCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACTTATCAGGTAGGACTGAAAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTGGGGAGAACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGATGGTGATGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAATGGACAAGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGTGGAACCTGTGATTATCGAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGACTCTTCTCAGAGATGGTA CCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTGGTCATATTCGAGGAGTGGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATCGGAAGTGTCTGCGCTGATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAAGACTACGAGAAAGCAAAAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATAAAATTTGCTAGCTTTGGCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGCCATGCGCACAAGTCGTACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGGGTAAGCGTTGTTCCAGAAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCTGTTGTTGAGGCTATATGCGGTTGAGAACCGCAAACTCAGATCCTCCCAAATCATCCTATATCTTAGTTTCGACACGGTTTTCGGCTTACCGACCTTCTGGCAAGAGGTGAAAGTCACAGCAACAGTGA CGCACGGACCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATTCTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAAACCAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCATAGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAGGATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTGCAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATTAGCTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTTATTCAACCGTATGTGAATGAATTCTCTCAGGTGGTCATCTCAATGCCCACTTGAT]
[+] EMBL OSC100451            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CTTGAGAACAAGGATAAAGTATCTTATGCAAGGGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCTCCCAGACTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGATGAAAATGGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTTTGGTGAGGATCCACTTACAACAGTAGGATTACTGGNACAAATTAAATGTGACGAGGGATAACACAGACTACTTATGGTATACCACATATTGTCGATGTTTGCCCAGGATGNGCAGTTCCTTTAGCAATGGGGAGGGATCTCAAGCTTACTTGTGATTGTCAGCTGGTCATGCTTT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL OSS13994A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ACATGGCAGAAATGGACTTATCAGGTAGGACTGAAAGGTGAGTCTATAAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTGGGGAGAACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGATGGTGATGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAATGGACAAGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGG AACTGTGG ACCTGTGATTATCGAGGTGAATACGATGAACCG AGT TCCAACCACCTGTGGTGACTCTTCTCAGAGATGGTACCCATGTTCCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU089684             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          AAGTCACAGCAACAGTGA CGCACGGACCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATTCTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAAACCAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCATAGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAGGATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTGCAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATTAGCTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTTATTCAAaaaaaaaa                                         ]
[+] EMBL AU032754             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        nTGACCGCACGGCCCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATTCTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAANCCAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCATAGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAGGATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTGCAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATTAGCTAATTAGCAATGTACTACCTTTTCAGCTTAAAAAAAAAaaaa                                                                ]




>consensus_9359#0
CGGTGGAGGGAAAAGCACCGAAAAGCGCGGCCTTTTTTTCTTCTTTTTTTCCCTCCCTTG
TTCTTCCCCACACTCCACTCCACTCCTCGCATCGCATCCCATCCATGGCCGCCTCCGCCG
TCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCGGCGGCGTCCGCGGCCG
TGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGGATCCTCATCTCCGGCT
CCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTGATAGAGAAGGCCAAGG
ACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCG
GCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGG
CCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTG
GGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGT
TCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATGATGAAGTCGGAAGGGC
TCTTTGAATGGCAAGGAGGGCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCCCT
TGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGCAG
TTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCCAA
TTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCAAATAAACCTCACAAAC
CTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTTGGTATTCCAGTTCCAC
ATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATCCAGAAGGGTGGCTCTT
TTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGCACAGCTGGTGGCCCAT
TCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATATGGTTTGTTGAGAGAAC
CAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTTTGTGAACCTGCCTTGG
TTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAGTCATCAGTTTTTAGAT
CAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAAGTATCTTATGCAAGGG
TAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCTCCCAGACT
GCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGATGAAAATGG
AATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTTTGGTGAGG
ATCCACTTACAACAGTAGGATTACTGGAACAAATAAATGTGACGAGGGATAACACAGACT
ACTTATGGTATACCACATATGTCGATGTTGCCCAGGATGAGCAGTTCCTTAGCAATGGGG
AGAATCTCAAGCTTACTGTGATGTCAGCTGGTCATGCTTTGCATATTTTCATTAATGGAC
AACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTGACTTATACTGGGAATG
TGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATAGCAGTTGGCCTCCCAA
ATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGCCCAGTGACGCTTGATG
GCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACTTATCAGGTAGGACTGA
AAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTGGGGAGAAC
CTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGATGGTGATG
AGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAATGGACAAG
GTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGTGGAACCTGTGATTATC
GAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGACTCTTCTCAGAGATGGT
ACCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTGGTCATATTCGAGGAGT
GGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATCGGAAGTGTCTGCGCTG
ATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAAGACTACGAGAAAGCAA
AAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATAAAATTTGCTAGCTTTG
GCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGCCATGCGCACAAGTCGT
ACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGGGTAAGCGTTGTTCCAG
AAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCTGTTGTTGAGGCTATAT
GCGGTTGAGAACCGCAAACTCAGATCCTCCCAAATCATCCTATATCTTAGTTTCGACACG
GTTTTCGGCTTACCGACCTTCTGGCAAGAGGTGAAAGTCACAGCAACAGTGACGCACGGA
CCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATTCT
ACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAAACCA
AGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCATAG
GAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAGGA
TCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTGCA
ATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATTAG
CTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTTATTCAACC
GTATGTGAATGAATTCTCTCAGGTGGTCATCTCAATGCCCACTTGAT

consensusID : consensus_9359#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 609
fasta sequence

                              [GACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACNAAGATCGTCGAAATGATGAAGTCGGAAGGGCCTCTTTGAATGGCAAGGAGGGCCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCCAATTGTATGTACTGTACCACTTCTCTTTAATACAGAGTACATGTACTGGGGGAAGCAGTTCCTCATTTCTTTAATGTTCTTTGTGACCGTTGTCCAAGAAATGAAAGGATATGATCGATNATAAAAAA]

[+] EMBL AU030668             [GACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCGGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGGCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTGGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGTTCAAGGCTGAGATGCAGAAGTTCACCACNAAGATCGTCGAAATGATGAAGTCGGAAGGGCCTCTTTGAATGGCAAGGAGGGCCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCCCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGCAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCCAATTGTATGTACTGTACCACTTCTCTTTAATACAGAGTACATGTACTGGGGGAAGCAGTTCCTCATTTCTTTAATGTTCTTTGTGACCGTTGTCCAAGAAATGAAAGGATATGATCGATNATAAAAAA]




>consensus_9359#1
GACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCC
GGCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAG
GCCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGT
GGGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCG
TTCAAGGCTGAGATGCAGAAGTTCACCACNAAGATCGTCGAAATGATGAAGTCGGAAGGG
CCTCTTTGAATGGCAAGGAGGGCCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGC
CCTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGG
CAGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATC
CAATTGTATGTACTGTACCACTTCTCTTTAATACAGAGTACATGTACTGGGGGAAGCAGT
TCCTCATTTCTTTAATGTTCTTTGTGACCGTTGTCCAAGAAATGAAAGGATATGATCGAT
NATAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9359#0      CGGTGGAGGGAAAAGCACCGAAAAGCGCGGCCTTTTTTTCTTCTTTTTTTCCCTCCCTTG 60
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TTCTTCCCCACACTCCACTCCACTCCTCGCATCGCATCCCATCCATGGCCGCCTCCGCCG 120
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TCGCCGTCGCGTTCGTCGTGGCGGTGGCCGCCGTGCTGGCCGCGGCGGCGTCCGCGGCCG 180
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGACGTACGACCGGAAGGCTGTGGTGGTGAACGGGCAGCGGAGGATCCTCATCTCCGGCT 240
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CCATCCACTACCCGAGGAGCACCCCCGAGATGTGGCCGGATCTGATAGAGAAGGCCAAGG 300
consensus_9359#1      -----------------------------------------------------------G 1
                                                                                 *

consensus_9359#0      ACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCG 360
consensus_9359#1      ACGGCGGCCTCGACGTGGTGCAGACGTACGTCTTCTGGAACGGCCACGAGCCGTCCCCCG 61
                      ************************************************************

consensus_9359#0      GCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGG 420
consensus_9359#1      GCCAGTACTACTTCGAGGGGAGGTATGATCTGGTGCACTTCATCAAGCTGGTGAAGCAGG 121
                      ************************************************************

consensus_9359#0      CCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTG 480
consensus_9359#1      CCGGCCTCTACGTGAACCTCCGCATTGGCCCCTACGTCTGCGCCGAGTGGAACTTCGGTG 181
                      ************************************************************

consensus_9359#0      GGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGT 540
consensus_9359#1      GGTTCCCTGTTTGGCTCAAGTATGTCCCCGGCATCAGCTTTAGGACTGATAATGAGCCGT 241
                      ************************************************************

consensus_9359#0      TCAAGGCTGAGATGCAGAAGTTCACCACAAAGATCGTCGAAATGATGAAGTCGGAAGGGC 600
consensus_9359#1      TCAAGGCTGAGATGCAGAAGTTCACCACNAAGATCGTCGAAATGATGAAGTCGGAAGGGC 301
                      **************************** *******************************

consensus_9359#0      -TCTTTGAATGGCAAGGAGGGCC-TATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCC 658
consensus_9359#1      CTCTTTGAATGGCAAGGAGGGCCCTATAATCCTCTCCCAGATAGAGAACGAGTTTGGGCC 361
                       ********************** ************************************

consensus_9359#0      CTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGC 718
consensus_9359#1      CTTGGAGTGGGATCAAGGTGAGCCTGCCAAGGCATATGCATCATGGGCAGCTAACATGGC 421
                      ************************************************************

consensus_9359#0      AGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCC 778
consensus_9359#1      AGTTGCGCTCAACACCAGTGTGCCATGGATCATGTGCAAAGAAGATGATGCCCCTGATCC 481
                      ************************************************************

consensus_9359#0      AATTATTAATACATGCAATGGATTTTACTGTGATTGGTTCTCCCCAAATAAACCTCACAA 838
consensus_9359#1      AATTGT-----------ATGTACTGTACCAC------TTCTCTTTAA---TACAGAGTAC 521
                      **** *           *** * * ***         *****   **    **     * 

consensus_9359#0      ACCTACCATGTGGACTGAAGCCTGGACTGCTTGGTATACAGGCTTTGGTATTCCAGTTCC 898
consensus_9359#1      ATGTACTGGGGGAAGCAGTTCCTCATTTCTTTAATGTTC----TTTGTGACCGTTGTCCA 577
                      *  ***   * * *      ***    *  **  * * *    ****  *     ** * 

consensus_9359#0      ACATAGACCAGTAGAGGATCTAGCATATGGTGTCGCCAAGTTTATCCAGAAGGGTGGCTC 958
consensus_9359#1      AGAAATGAAAGGATATGATCGATNATAAAAAA---------------------------- 609
                      * * *    ** * * **** *  ***                                 

consensus_9359#0      TTTTGTGAATTATTACATGTATCATGGTGGAACAAACTTTGGACGCACAGCTGGTGGCCC 1018
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ATTCATTGCCACTAGTTATGACTATGATGCTCCTATTGATGAATATGGTTTGTTGAGAGA 1078
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ACCAAAATGGGGCCACTTGAAGCAGTTGCATAAAGCCATAAAACTTTGTGAACCTGCCTT 1138
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GGTTGCAGGAGACCCCATTGTAACTTCACTTGGAAATGCTCAGAAGTCATCAGTTTTTAG 1198
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ATCAAGCACAGGAGCTTGTGCAGCTTTCCTTGAGAACAAGGATAAAGTATCTTATGCAAG 1258
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GGTAGCATTTAATGGCATGCACTATGACCTGCCTCCGTGGTCCATAAGTATTCTCCCAGA 1318
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CTGCAAAACGACAGTCTTCAATACTGCTAGGGTGGGAAGTCAGATTTCACAGATGAAAAT 1378
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GGAATGGGCTGGAGGATTTGCATGGCAATCATACAACGAGGAGATAAATTCCTTTGGTGA 1438
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GGATCCACTTACAACAGTAGGATTACTGGAACAAATAAATGTGACGAGGGATAACACAGA 1498
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CTACTTATGGTATACCACATATGTCGATGTTGCCCAGGATGAGCAGTTCCTTAGCAATGG 1558
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GGAGAATCTCAAGCTTACTGTGATGTCAGCTGGTCATGCTTTGCATATTTTCATTAATGG 1618
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ACAACTGAAAGGAACTGTTTATGGCAGCGTAGATGACCCAAAACTGACTTATACTGGGAA 1678
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGTGAAGCTCTGGGCAGGCAGCAATACAATTTCCTGCTTAAGTATAGCAGTTGGCCTCCC 1738
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AAATGTGGGAGAACATTTTGAGACTTGGAATGCTGGGATTCTTGGCCCAGTGACGCTTGA 1798
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGGCCTGAATGAGGGAAGAAGGGATCTGACATGGCAGAAATGGACTTATCAGGTAGGACT 1858
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GAAAGGTGAGTCTATGAGTCTTCATTCACTCAGTGGAAGCTCAACAGTGGAGTGGGGAGA 1918
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ACCTGTGCAGAAGCAGCCTCTAACATGGTACAAGGCTTTTTTCAATGCACCGGATGGTGA 1978
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGAGCCATTAGCTTTGGACATGAGTAGTATGGGGAAGGGGCAAATCTGGATAAATGGACA 2038
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AGGTATTGGGCGATATTGGCCTGGCTACAAGGCTTCTGGAAACTGTGGAACCTGTGATTA 2098
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TCGAGGTGAATACGATGAAACGAAGTGTCAAACCAACTGTGGTGACTCTTCTCAGAGATG 2158
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GTACCATGTTCCTCGTTCATGGCTTAGTCCCACAGGAAACCTTTTGGTCATATTCGAGGA 2218
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GTGGGGTGGTGACCCTACTGGAATCTCAATGGTCAAAAGAAGCATCGGAAGTGTCTGCGC 2278
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGATGTGTCCGAATGGCAGCCATCAATGAAGAACTGGCATACAAAAGACTACGAGAAAGC 2338
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AAAAGTCCACCTCCAATGTGACAATGGACAGAAGATAACTGAAATAAAATTTGCTAGCTT 2398
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      TGGCACACCACAGGGCTCCTGTGGAAGCTACACCGAAGGAGGCTGCCATGCGCACAAGTC 2458
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GTACGACATATTTTGGAAGAACTGCGTCGGTCAAGAACGCTGCGGGGTAAGCGTTGTTCC 2518
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AGAAATATTTGGTGGAGATCCATGCCCAGGGACAATGAAACGGGCTGTTGTTGAGGCTAT 2578
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      ATGCGGTTGAGAACCGCAAACTCAGATCCTCCCAAATCATCCTATATCTTAGTTTCGACA 2638
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CGGTTTTCGGCTTACCGACCTTCTGGCAAGAGGTGAAAGTCACAGCAACAGTGACGCACG 2698
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GACCGTCAGAAGTTACAGAAAATTTAGTTGTAATTGAAGCATCAGTGTATGTACATTATT 2758
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CTACATAGAAATTCACTGGGAAGGAAAGATTCAGGACTCTGCAGTGCAGGAATGGGAAAC 2818
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CAAGGGGCTGTATGTATGGTCCTCTGGACAGTATTGGTTTTTGGCTGGGGAAGGGCGCAT 2878
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AGGAGACTCTGCTGATACATGAGTCCATATGCGCAATGGCTTTTGCATATTGGATTGGAG 2938
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      GATCAACTCTGTTTCATACGTGATGTGATGATTCATTTTTAAGCTCACTGAAAACTACTG 2998
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CAATGTAATGCTGGTAATGTGCAGGGTCCATCATTGATGTATTAAATTGTCCTCTTAATT 3058
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      AGCTAATTAGCAATGTACTACCTTTTCAGCTTATAAATAAATCTGCTGTATGTTATTCAA 3118
consensus_9359#1      ------------------------------------------------------------
                                                                                  

consensus_9359#0      CCGTATGTGAATGAATTCTCTCAGGTGGTCATCTCAATGCCCACTTGAT 3167
consensus_9359#1      -------------------------------------------------