These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9362#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 720 fasta sequence [TTTTTTCACAGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT-ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA-TGGTCTCATTTTCCCCTTCCATAA-TGTCTTCATAG-TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA-TGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAGATTGATCATCTGACAGCGATTGCATCCT-CCCAT-GGACGTAAAACAGGCCTCTCCGATACGAAGTTTTTTCCAGTTATCCTCACTGTATGGACTCGACCCAAAGATAACAAGGGTGGGACGGAATCTCATTGCATCAACAGGCAACTTTTGCTTACAGTCCCCT] [-] EMBL AU030735 [TTTTTTCACAGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCGCCCGGCAA TGGTCTCATTTTCCCCNTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCNTTGATTTGAGCACCTGCCCGGAGTCCNGGTGTAGATTGATCATCTGACAGCGATTGCATCCG CCCAT GGACGTAAAACAGGCCTCTCCGATACGAAGTTTTTT ] [+] EMBL CF303506 [ AGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTT ACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCTTTGATTTGAGCACCTGCCCGG ] [-] EMBL BI808003 [ tttttGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCG TTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTA TGGAAAATTACGAAAATGCTTTGTATGCCGACGTG TTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAGTTTTAATAGGATG CGAA AAAATCTTGCCCTTTTTTCGTCTG ] [+] EMBL CB642110 [ attaaaaAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGCCTTAAGGTTAAAGCCCCTTGGGTGTTATATAAAAGCATTTTGAAAACTATAGTATATATGTGATACATGGGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACAAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGGCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGGGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAAATTGATCATCTGACAGCGATTGCATCCT CCCAT GGACGTAAAACAGGCCTCTCCGATACAAAGTTTTTTCCAGTTATCCTCACTGTATGGACTCGACCCAAAGATAACAAGGGTGGGACGGAATCTCATTGCATCAACAGGCAACTTTTGCTTACAGTCCCCT] [-] EMBL BI809688 [ ttTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCC TGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCA CTAA TAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGTCACTCAAGTGATATGTCCACAGGTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAAGTGGTCTCATTTTCCCCTTCCATAAGTGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTG CCTTTTTTCGTCTGTATGACGCTAAAGTGG CAA TGGTTCCTTTGATTTGAGCACCTG CCGGAGTCCTGGTGTAGA TGATCATCTGACAG GATTGGATCCTCCCCATGGGACGTAAAA AGGg ] [-] EMBL BM038897 [ ttTTTGAGCTAGGGCTTAGGCTTAGAGCCGCTGGTGTGTTATATAAAAGCA TTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGC TTGTATGCCGACGTGTTGGGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTG TGCCCCACTTGGAGCCATCTCCCTGCAA GGGTCTCATTTTCCCCTTCCATAAGTGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAAGTGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAGA TGATCATCTGACAG GA TGGATCCT CCCAT GGACGTAAAACAGGGCT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||