cluster # 9362

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Oryza sativa
cluster # 9362 cluster # 9362 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9362#0 length = 720 sequences # 6
consensusID : consensus_9362#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 720
fasta sequence
                              [TTTTTTCACAGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT-ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA-TGGTCTCATTTTCCCCTTCCATAA-TGTCTTCATAG-TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA-TGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAGATTGATCATCTGACAGCGATTGCATCCT-CCCAT-GGACGTAAAACAGGCCTCTCCGATACGAAGTTTTTTCCAGTTATCCTCACTGTATGGACTCGACCCAAAGATAACAAGGGTGGGACGGAATCTCATTGCATCAACAGGCAACTTTTGCTTACAGTCCCCT]

[-] EMBL AU030735             [TTTTTTCACAGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCGCCCGGCAA TGGTCTCATTTTCCCCNTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCNTTGATTTGAGCACCTGCCCGGAGTCCNGGTGTAGATTGATCATCTGACAGCGATTGCATCCG CCCAT GGACGTAAAACAGGCCTCTCCGATACGAAGTTTTTT                                                                                              ]
[+] EMBL CF303506             [         AGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTT ACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCTTTGATTTGAGCACCTGCCCGG                                                                                                                                                                                  ]
[-] EMBL BI808003             [     tttttGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCG TTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTA TGGAAAATTACGAAAATGCTTTGTATGCCGACGTG TTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAGTTTTAATAGGATG CGAA AAAATCTTGCCCTTTTTTCGTCTG                                                                                                                                                                                                                                    ]
[+] EMBL CB642110             [                           attaaaaAAATATGAACCATTTCCGTCTGTACATTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGCCTTAAGGTTAAAGCCCCTTGGGTGTTATATAAAAGCATTTTGAAAACTATAGTATATATGTGATACATGGGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACAAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGGCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGGGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAA TGGTCTCATTTTCCCCTTCCATAA TGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAA TGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAAATTGATCATCTGACAGCGATTGCATCCT CCCAT GGACGTAAAACAGGCCTCTCCGATACAAAGTTTTTTCCAGTTATCCTCACTGTATGGACTCGACCCAAAGATAACAAGGGTGGGACGGAATCTCATTGCATCAACAGGCAACTTTTGCTTACAGTCCCCT]
[-] EMBL BI809688             [                                                                               ttTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCC TGTGTGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCA CTAA TAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTTTGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGTCACTCAAGTGATATGTCCACAGGTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAAGTGGTCTCATTTTCCCCTTCCATAAGTGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTG CCTTTTTTCGTCTGTATGACGCTAAAGTGG CAA TGGTTCCTTTGATTTGAGCACCTG CCGGAGTCCTGGTGTAGA TGATCATCTGACAG GATTGGATCCTCCCCATGGGACGTAAAA AGGg                                                                                                                   ]
[-] EMBL BM038897             [                                                                                    ttTTTGAGCTAGGGCTTAGGCTTAGAGCCGCTGGTGTGTTATATAAAAGCA TTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTCTGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGC TTGTATGCCGACGTGTTGGGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTGCTGATGCAACTTGCAATTCCATATATGT ACTCAAGTGATATGTCCACAGCTACTTCATCATCAAGTCATTCTGTGGAAGGGTACACTTG TGCCCCACTTGGAGCCATCTCCCTGCAA GGGTCTCATTTTCCCCTTCCATAAGTGTCTTCATAG TTTAATAGGATGCCGAACAAAATCTTGCCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAAGTGGTTCCTTTGATTTGAGCACCTGCCCGGAGTCCTGGTGTAGA TGATCATCTGACAG GA TGGATCCT CCCAT GGACGTAAAACAGGGCT                                                                                                                 ]




>consensus_9362#0
TTTTTTCACAGAAACCGTAATCATGAGAACTCTGAAATATGAACCATTTCCGTCTGTACA
TTTTTCTTCACAATCATTTCGTTTTGTTTGAGCTAGGGCTTAGGCTTAGAGCCCCTTGTG
TGTTATATAAAAGCATTTTGAGAACTATAGTATATATGTGATACATGTGAAGGTATATTC
TGTTTTCACCTAACTAAACTTGTTTCATCTTATGCGTATTGGAAAATTACGAAAATGCTT
TGTATGCCGACGTGTTTTGTATACGTAACAATCATCACTTCATCATCACCAAGGTCGCTG
CTGATGCAACTTGCAATTCCATATATGTACTCAAGTGATATGTCCACAGCTACTTCATCA
TCAAGTCATTCTGTGGAAGGGTACACTTGTTGCCCCACTTGGAGCCATCTCCCTGCAATG
GTCTCATTTTCCCCTTCCATAATGTCTTCATAGTTTAATAGGATGCCGAACAAAATCTTG
CCCTTTTTTCGTCTGTATGACGCTAAAGTGGCCAATGGTTCCTTTGATTTGAGCACCTGC
CCGGAGTCCTGGTGTAGATTGATCATCTGACAGCGATTGCATCCTCCCATGGACGTAAAA
CAGGCCTCTCCGATACGAAGTTTTTTCCAGTTATCCTCACTGTATGGACTCGACCCAAAG
ATAACAAGGGTGGGACGGAATCTCATTGCATCAACAGGCAACTTTTGCTTACAGTCCCCT
clustalw multiple alignements is not computed in this case