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Oryza sativa
cluster # 9364 cluster # 9364       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9364#0 length = 893 sequences # 6  

consensusID : consensus_9364#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 893
fasta sequence
                              [AGGGAATACTTGGGCCTGCTGCCAAGGACAAGAAGGCTCGGGGCATGAGGACGAACAAGAGCCGGGGACCCGCGAGGAATCAGAAGACGGCGAAGCTCTCGGAGACCGGCGAGGGGACCAAGAAGTCCGACAAGAAGGGCGGCGGCGGAGGCGGCAGCTCTTCGGCAGGGGCGGCGGCGGGCGGGGTTGCCAAGAAGCGAAACGCCGTGGATTTCCTGAACCGGATGAACCAGAACGGCTCGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGGAGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCGGCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGTCGGCCACCGAAGCGGGCGGCCGCGCCGCCGACGCCGCCGCCGTCCAAGAGGGCCAAGGACGACAAGCCGACCAGGAAGCGCGGGAAGAAGTGAACGGTCGTCGGAATGGGGAGGTGGCGGGAAAGGCTGCGGGTGTAAATGTTTGTAGGGGTTGGCGGTAGAAAAAAACCTTTTGTTTTTGTGTTTTGGCGCCAATTGTTGTAGCGAGGAGGTGGGAGAATTTTTGTTGCTTTTTGGCGGGAGATGAACGATGGAACATCTGGTTTCACTCTCACCTCGATACTTCATGAAAGATTAAGAACTTTGGTGAAAGAATCGTGTTCACCTTAAGGCTGGTTTTGTAGGATATGTTTTTGACTGGATTCTGTAACCTACACTGAATCAGGACACATTGGTGTCAATATGGCATGAATCGAATCAAGAACATATGGTGTCAATGTGGCATCATCATTTACCCGCAAAAAAAAAAAAAGA]

[+] EMBL CB964474             [AGGGAATACTTGGGCCTGCTGCCAAGGACAAGAAGGCTCGGGGCATGAGGACGAACAAGAGCCGGGGACCCGCGAGGAATCAGAAGACGGCGAAGCTCTCGGAGACCGGCGAGGGGACCAAGAAGTCCGACAAGAAGGGCGGCGGCGGAGGCGGCAGCTCTTCGGCAGCGGCGGCGGCGGGCGGGGTTGCCAAGAAGCGAAACGCCGTGGATTTCCTGAACCGGATGAACCAGAACGGCTCGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGGAGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCGGCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGCCGGCCACCGAAGCGGGCGGCCGCGCCGCCGACGCCGCCGCCGTCCAAGAGGGCCAAGGACGACAAGCCGACCAGGAAGCGCGGGAAGAAGTGAACGGTCGTCGGAATGGGGAGGTGGCGGGAAAGGCTGCGGGTGTAAATGTTTGTAGGGGTTGGCGGTAGAAAAAAACCTTTTGTATTAGTGTTTTGGCGCCAATTGTTGTAGCGAGGAGGTGGGAGAATATTTGTTGCTTTTTGGCGGGAGATGAACGATGGAACATCTGGTTTCACTCTCACCTCGATACTTCATGAAAGATTAAG                                                                                                                                                                               ]
[+] EMBL AU077630             [                                                                          AGGAATCAGAAGACGGCGAAGCTCTCGGAGACCGGCGAGGGGACCAAGAAGTCCGACAAGAA GGCGNCGGCGNAGGCGGCAGCTCTTCGGCAGGGGCGGCGGCGGGCGGGGTTGCCAAGAAGCGAAACGCCGTGGATTTCCTGAACCGGATGAACCAGAACGGCTCGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGGAGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCGGCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGTCGGCC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL AU030815             [                                                                            GAATCAGAAGACGGCGAAGCTCTCGGAGACCGGCGAGGGGACCAAGAAGTCCGACAAGAAGGGCGGCGGCGGAGGCGGCAGCTCTTCGGNNGGNGCGGCGGCGGGCGGGGTTGCCAAGAAGCGAAACGCCGTGGATTTCCTGAACCGGATGAACCAGAACGGCTCGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGGAGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCGGCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGTCGGCCACCGAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU165926             [                                                                                                                                                                                                                                          ACGGCTCGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGGAGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCGGCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGTCGGCCACCGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[-] EMBL CB672902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    GGGCCAAGGACGACAAGCCGACCAGGAAGCGCGGGAAGAAGTGAACGGTCGTCGGAATGGGGAGGTGGCGGGAAAGGCTGCGGGTGTAAATGTTTGTAGGGGTTGGCGGTAGAAAAAAACCTTTTGTTTTTGTGTTTTGGCGCCAATTGTTGTAGCGAGGAGGTGGGAGAATTTTTGTTGCTTTTTGGCGGGAGATGAACGATGGAACATCTGGTTTCACTCTCACCTCGATACTTCATGAAAGATTAAGAACTTTGGTGAAAGAATCGTGTTCACCTTAAGGCTGGTTTTGTAGGATATGTTTTTGACTGGATTCTGTAACCTACACTGAATCAGGACACATTGGTGTCAATATGGCATGAATCGAATCAAGAACATATGGTGTCAATGTGGCATCATCATTTACCCGCAAAAAAAAAAAAAGA]
[-] EMBL CB672904             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGCCAAGGACGACAAGCCGACCAGGAAGCGCGGGAAGAAGTGAACGGTCGTCGGAATGGGGAGGTGGCGGGAAAGGCTGCGGGTGTAAATGTTTGTAGGGGTTGGCGGTAGAAAAAAACCTTTTGTTTTTGTGTTTTGGCGCCAATTGTTGTAGCGAGGAGGTGGGAGAATTTTTGTTGCTTTTTGGCGGGAGATGAACGATGGAACATCTGGTTTCACTCTCCCCTCGATACTTCATGAAAGATTAAGAACTTTGGTGAAAGAATCGTGTTCCCCTTAAGGCTGGTTTTGTAGGATATGTTTTTGACTGGATTCTGTAACCTACACTGAATCAGGACACATTGGTGTCAATATGGCATGAATCGAATCAAGAACATATGGTGTCAATGTGGCATCATCATTTACCCGCAAAAAAAAAAAAAGA]


>consensus_9364#0 AGGGAATACTTGGGCCTGCTGCCAAGGACAAGAAGGCTCGGGGCATGAGGACGAACAAGA GCCGGGGACCCGCGAGGAATCAGAAGACGGCGAAGCTCTCGGAGACCGGCGAGGGGACCA AGAAGTCCGACAAGAAGGGCGGCGGCGGAGGCGGCAGCTCTTCGGCAGGGGCGGCGGCGG GCGGGGTTGCCAAGAAGCGAAACGCCGTGGATTTCCTGAACCGGATGAACCAGAACGGCT CGCCGTCGACGGAGAGGGTGTCGTTGCTGGAGACGCTGAAGCTCTCCGCGGCGGCGACGG AGCAGCAGAAGAAGTCGTCGTCGTCGTCATCCGGGAAGGGCGACGGCCGGAAGGAGGCCG GCGGCTCAGGCTCCAAGAAGGGCGCCGCCGCCTCGACGCCACCAGGGAGGAGGATCGGTC GGCCACCGAAGCGGGCGGCCGCGCCGCCGACGCCGCCGCCGTCCAAGAGGGCCAAGGACG ACAAGCCGACCAGGAAGCGCGGGAAGAAGTGAACGGTCGTCGGAATGGGGAGGTGGCGGG AAAGGCTGCGGGTGTAAATGTTTGTAGGGGTTGGCGGTAGAAAAAAACCTTTTGTTTTTG TGTTTTGGCGCCAATTGTTGTAGCGAGGAGGTGGGAGAATTTTTGTTGCTTTTTGGCGGG AGATGAACGATGGAACATCTGGTTTCACTCTCACCTCGATACTTCATGAAAGATTAAGAA CTTTGGTGAAAGAATCGTGTTCACCTTAAGGCTGGTTTTGTAGGATATGTTTTTGACTGG ATTCTGTAACCTACACTGAATCAGGACACATTGGTGTCAATATGGCATGAATCGAATCAA GAACATATGGTGTCAATGTGGCATCATCATTTACCCGCAAAAAAAAAAAAAGA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)