cluster # 9379

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9379 cluster # 9379 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9379#0 length = 1356 sequences # 4

consensus_9379#1 length = 900 sequences # 1
consensus_9379#2 length = 786 sequences # 1

consensusID : consensus_9379#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1356
fasta sequence

                              [AAAAGCTTCCCTTCCCCCATCTCCCTCTCCTCTCCTCTCCTCCCCGCCTCCCCCCGCCTCGATACCCTGCAAGCCCTAGCTCTCTCTCGCCGCCAATGGAGTCGCAGGTGCTGGTGGCGCTCGCCCTCTCGCTCGTCGGCGGCCTCAGCACGTCCATCGGTGCGCTGTTTGTGATTTTGAATCCGACGCCTAATCTTAAGATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGTTGAGCATTTCCTTTCTAGATTTGGCACACAATGCATTGAATTCTATT-GGTTTCTTGAAGGGCAACCTTTGGTTTTTTGCTGGAGTTCTTTTCTTTGGTTTGGTTGTCAAGTTTATTCCAGAGCCAACTGTTGTGCCAACAGCTGATGCAGGCAAGAAGCAGACTGACGATGATGGTTCGGGTAAAGATATGATGAAAAAACATCGTCGGCAAGTATTATTCAGTGGGATCATTACTGCTGTTGGAATCAGCTTGCATAACTTTCCGGAGGGGATGGAAGTATTTTTGGGATCCATGAAGGGCCTTCGTGTGGGACTGAACTTGGCTATTGCTATTGCTTTACACAATATACCAGAGGGGGTTGCTGTAGCTCTACCACTCTATTTTGCTACCAACAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAATGATCATTGTTGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCACACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGGGATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGCTTCGTTTTCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK068640             [AAAAGCTTCCCTTCCCCCATCTCCCTCTCCTCTCCTCTCCTCCCCGCCTCCCCCCGCCTCGATACCCTGCAAGCCCTAGCTCTCTCTCGCCGCCAATGGAGTCGCAGGTGCTGGTGGCGCTCGCCCTCTCGCTCGTCGGCGGCCTCAGCACGTCCATCGGTGCGCTGTTTGTGATTTTGAATCCGACGCCTAATCTTAAGATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGTTGAGCATTTCCTTTCTAGATTTGGCACACAATGCATTGAATTCTATT GGTTTCTTGAAGGGCAACCTTTGGTTTTTTGCTGGAGTTCTTTTCTTTGGTTTGGTTGTCAAGTTTATTCCAGAGCCAACTGTTGTGCCAACAGCTGATGCAGGCAAGAAGCAGACTGACGATGATGGTTCGGGTAAAGATATGATGAAAAAACATCGTCGGCAAGTATTATTCAGTGGGATCATTACTGCTGTTGGAATCAGCTTGCATAACTTTCCGGAGGGGATGGAAGTATTTTTGGGATCCATGAAGGGCCTTCGTGTGGGACTGAACTTGGCTATTGCTATTGCTTTACACAATATACCAGAGGGGGTTGCTGTAGCTCTACCACTCTATTTTGCTACCAACAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAATGATCATTGTTGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCACACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGGGATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATG                                           ]
[+] EMBL OSR23441A            [                   TCTCCCTCTCCTCTCCTCTCCTCCCCGCCTCCCCCNGCCTCGATACCCTGCAAGCCCTAGCTCTCTCTCGCCGCCAATGGAGTCGCAGGTGCTGGTGGCGCTCGCCCTCTCGCTCGTCGGCGGCCTCAGCACGTCCATCGGTGCNCTGTTTGTGATTTTGAATCCGACGCCTAATCTTAAGATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGTTGAGCATTTCNTTTCTAGATTTGGNACACAATGCATTNAATTCTATT GGTTTCTTGAAGGGCAA CTTTGGTTNTTTGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB681036             [                                                                                                                                                                                       CGACGCCTAATCTTAAAATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGTTGAGCATTTCCTTTCTAGATTTGGCACACAATGCATTGAATTCTATTAGGTTTCTTGAAGGGCAACCTTTGGATTTTTGCTGGAGTTCATTTCTTTGGTTTGGTTGCCAAGTTTATTCCAAAGCCAACTGTTGTGCCAACAGCTGATGCAGGCAAGAAGCAGACTGACTATGATGGTTCGGGTAAAGATATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AU031876             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AAGGAAGTGAGCTTGTAGCACATGACTATCCATCCAAGCTTGTCACACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGGGATNTGGGGATATATGGTTCNCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGNCCATTTTACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGCTTCGTTTTCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9379#0
AAAAGCTTCCCTTCCCCCATCTCCCTCTCCTCTCCTCTCCTCCCCGCCTCCCCCCGCCTC
GATACCCTGCAAGCCCTAGCTCTCTCTCGCCGCCAATGGAGTCGCAGGTGCTGGTGGCGC
TCGCCCTCTCGCTCGTCGGCGGCCTCAGCACGTCCATCGGTGCGCTGTTTGTGATTTTGA
ATCCGACGCCTAATCTTAAGATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGT
TGAGCATTTCCTTTCTAGATTTGGCACACAATGCATTGAATTCTATTGGTTTCTTGAAGG
GCAACCTTTGGTTTTTTGCTGGAGTTCTTTTCTTTGGTTTGGTTGTCAAGTTTATTCCAG
AGCCAACTGTTGTGCCAACAGCTGATGCAGGCAAGAAGCAGACTGACGATGATGGTTCGG
GTAAAGATATGATGAAAAAACATCGTCGGCAAGTATTATTCAGTGGGATCATTACTGCTG
TTGGAATCAGCTTGCATAACTTTCCGGAGGGGATGGAAGTATTTTTGGGATCCATGAAGG
GCCTTCGTGTGGGACTGAACTTGGCTATTGCTATTGCTTTACACAATATACCAGAGGGGG
TTGCTGTAGCTCTACCACTCTATTTTGCTACCAACAGCAAATGGCAAGCATTTAAAGTTG
CAACCCTCTCTGGTTTCGCTGAGCCACTAGGAATGATCATTGTTGCTTACTTGTTTCCGA
GCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTATGGCCT
TCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTG
TCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGGAGATCA
GCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCACACTATC
CTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGG
GATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATT
CGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTTACAGTG
AAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGC
TTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAAC
TTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGCTTCGTT
TTCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_9379#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 900
fasta sequence

                              [GCTCTACCACTCTATTTTGCTACCAACAGGTACCTATTTTACCCATGTAGAGAGGAACTGAATTAAGTTATATGGTTCACAGTAGCCTTCAGAAATGAGTTCATTAAAGAATATATGTTATGGCTTTGAGATTTTCTATAGACAAAAGAGTGTACTAGTTACTGGTAAAAAAAGAGTGTACTAGTTACTGGTAAAAAAAGAGTGTACTAGTTGAAGTCATGAATTGAGGATAGGTGTGTAAGATTTGAGAACTAGTCATTGGCGAACCACTCTTATCTGCTAGTACTACATTCCACCTGTTGCACTTGGAGGATTACAGAGCATTAATAATTTCTAATGGTTTTGCTTTAGCGAAAAGGCAAATGATGCTTAACCTTTTCAATTTGCAATAATAGCATGTTTCTGATAGTTCTCTTGTAATTTTGTAACACTTTCTTCTACCACAGTAATTATATCTTGTTCCTTTTTTCACATGTCAAAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGATCATTGTTGGTATGCTATGTCATACGCACTTCTCTGTAATATTTTTCTTCTGGTGTATATCCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGGTCAGTCTGTTAATAAAAAGAAAAACTGGTATCAGTATTCTGCATTTTGTTGACCTCCCATGTGCCTTTCTGCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGANATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGGTTTGTTGA]

[+] EMBL CB622861             [GCTCTACCACTCTATTTTGCTACCAACAGGTACCTATTTTACCCATGTAGAGAGGAACTGAATTAAGTTATATGGTTCACAGTAGCCTTCAGAAATGAGTTCATTAAAGAATATATGTTATGGCTTTGAGATTTTCTATAGACAAAAGAGTGTACTAGTTACTGGTAAAAAAAGAGTGTACTAGTTACTGGTAAAAAAAGAGTGTACTAGTTGAAGTCATGAATTGAGGATAGGTGTGTAAGATTTGAGAACTAGTCATTGGCGAACCACTCTTATCTGCTAGTACTACATTCCACCTGTTGCACTTGGAGGATTACAGAGCATTAATAATTTCTAATGGTTTTGCTTTAGCGAAAAGGCAAATGATGCTTAACCTTTTCAATTTGCAATAATAGCATGTTTCTGATAGTTCTCTTGTAATTTTGTAACACTTTCTTCTACCACAGTAATTATATCTTGTTCCTTTTTTCACATGTCAAAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGATCATTGTTGGTATGCTATGTCATACGCACTTCTCTGTAATATTTTTCTTCTGGTGTATATCCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGGTCAGTCTGTTAATAAAAAGAAAAACTGGTATCAGTATTCTGCATTTTGTTGACCTCCCATGTGCCTTTCTGCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGANATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGGTTTGTTGA]




>consensus_9379#1
GCTCTACCACTCTATTTTGCTACCAACAGGTACCTATTTTACCCATGTAGAGAGGAACTG
AATTAAGTTATATGGTTCACAGTAGCCTTCAGAAATGAGTTCATTAAAGAATATATGTTA
TGGCTTTGAGATTTTCTATAGACAAAAGAGTGTACTAGTTACTGGTAAAAAAAGAGTGTA
CTAGTTACTGGTAAAAAAAGAGTGTACTAGTTGAAGTCATGAATTGAGGATAGGTGTGTA
AGATTTGAGAACTAGTCATTGGCGAACCACTCTTATCTGCTAGTACTACATTCCACCTGT
TGCACTTGGAGGATTACAGAGCATTAATAATTTCTAATGGTTTTGCTTTAGCGAAAAGGC
AAATGATGCTTAACCTTTTCAATTTGCAATAATAGCATGTTTCTGATAGTTCTCTTGTAA
TTTTGTAACACTTTCTTCTACCACAGTAATTATATCTTGTTCCTTTTTTCACATGTCAAA
GCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGA
TCATTGTTGGTATGCTATGTCATACGCACTTCTCTGTAATATTTTTCTTCTGGTGTATAT
CCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAG
CTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGGTCAGTCTGTTAATAAAAAGAA
AAACTGGTATCAGTATTCTGCATTTTGTTGACCTCCCATGTGCCTTTCTGCAGTTGGTGG
GGTTATGGCCTTCCTCACTTTGCATGANATGTTACCTCTAGCATTTGACTATGCTGGTCA
AAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGGTTTGTTGA

consensusID : consensus_9379#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 786
fasta sequence

                              [ACATGTCAAAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGATCATTGTTGGTATGCTATGTCATATGCACTTCTCTGTAATATTTTTCTTCTGGTGTATATCCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCACACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGGGATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGCTTCGTT]

[-] EMBL CB681037             [ACATGTCAAAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGATCATTGTTGGTATGCTATGTCATATGCACTTCTCTGTAATATTTTTCTTCTGGTGTATATCCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCACACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCAGGCAGGGATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACTTAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGCTTCGTT]




>consensus_9379#2
ACATGTCAAAGCAAATGGCAAGCATTTAAAGTTGCAACCCTCTCTGGTTTCGCTGAGCCA
CTAGGAGTGATCATTGTTGGTATGCTATGTCATATGCACTTCTCTGTAATATTTTTCTTC
TGGTGTATATCCATTGAGTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGT
TTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGTTA
TGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAAAC
AGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTTGG
AGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTCAC
ACTATCCTCTGAACTGAAGCGGAGAACTTAGGAGAGATGTTAACTTTCTGAGCACTGCCA
GGCAGGGATGTGGGGATATATGGTTCGCCATTTATCAAACGGAAACAAGGATTTGTGACT
TAGATTCGCGCGTTGGCCATGTGTATGCTATCACAGCTGGTCATTGTATTTGACCATTTT
ACAGTGAAGATGAACAGTCTGGGATGGGTGGCAAAACACCACCCAGAATCAGAATGTAAC
CTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACTGATCAGATCAGTCC
TTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAATAAAAATAAAAATGC
TTCGTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9379#0      AAAAGCTTCCCTTCCCCCATCTCCCTCTCCTCTCCTCTCCTCCCCGCCTCCCCCCGCCTC 60
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GATACCCTGCAAGCCCTAGCTCTCTCTCGCCGCCAATGGAGTCGCAGGTGCTGGTGGCGC 120
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TCGCCCTCTCGCTCGTCGGCGGCCTCAGCACGTCCATCGGTGCGCTGTTTGTGATTTTGA 180
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ------------------------------------------------------------
                                                                                  

consensus_9379#0      ATCCGACGCCTAATCTTAAGATGCTTGGGCTTCTACAGGGTTTTGCCGCTGGACTTATGT 240
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ------------------------------------------------------------
                                                                                  

consensus_9379#0      TGAGCATTTCCTTTCTAGATTTGGCACACAATGCATTGAATTCTATTGGTTTCTTGAAGG 300
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ------------------------------------------------------------
                                                                                  

consensus_9379#0      GCAACCTTTGGTTTTTTGCTGGAGTTCTTTTCTTTGGTTTGGTTGTCAAGTTTATTCCAG 360
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ----------------------------------------GCTCTACCACTCTATTTTGC 20
                                                                                  

consensus_9379#0      AGCCAACTGTTGTGCCAACAGCTGATGCAGGCAAGAAGCAGACTGACGATGATGGTTCGG 420
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      TACCAACAGGTACCTATTTTACCCATGTAGAGAGGAACTGAATTAAGTTATATGGTTC-- 78
                                                                                  

consensus_9379#0      GTAAAGATATGATGAAAAAACATCGTCGGCAAGTATTATTCAGTGGGATCATTACTGCTG 480
consensus_9379#2      ------------------------------------------------------------
consensus_9379#1      ACAGTAGCCTTCAGAAATGAGTTCATTAAAGAATATATGTTATGGCTTTGAGATTTTCTA 138
                                                                                  

consensus_9379#0      TTGGAATCAGCTTGCATAACTTTCCGGAGGGGATGGAAGTATTTTTGGGATCCATGAAGG 540
consensus_9379#2      -------------------------------------------------ACATGTCAAAG 11
consensus_9379#1      TAGACAAAAGAGTGTACTAGTTACTGGTAAAAA-AAGAGTGTACTAGTTACTGGTAAAAA 197
                                                                       *    * **  

consensus_9379#0      GCCTTCGTGTGGGACTGAACTTGGCTATTGCTATTGCTTTACACAATATACCAGAGGGGG 600
consensus_9379#2      CAAATGGCAAGCATTTAAAGTTG-CAACCCTCTCTGGTTTCGCTGAGCCACTAGGAGTGA 70
consensus_9379#1      AAGAGTGTACTAG-TTGAAGTCATGAATTGAGGATAGGT-GTGTAAGATTTGAGAACTAG 255
                            *        * ** *     *       *   *      *      **      

consensus_9379#0      TTGCTGTAGCTCTACCACTCTATTTTGCTACCA-ACAGCAAATGGCAAGCATTTAAAGTT 659
consensus_9379#2      TCATTGTTGGTATGCTATGTCATAT-GCACTTC-TCTGTAA----TATTTTTCTTCTGGT 124
consensus_9379#1      TCATTGGCGAACCACTCTTATCTGCTAGTACTACATTCCACCTGTTGCACTTGGAGGATT 315
                      *   **  *     *       *                *           *       *

consensus_9379#0      GCAACCCTCT--CTGGTTTCGCTGA----GCCAC-TAGGAATGATCATTGTTGCTTACTT 712
consensus_9379#2      GTATATCCAT--TGAGTGCTGAAGG----CTGATGCAAATGTGATTGCTTCAGCTTACTT 178
consensus_9379#1      ACAGAGCATTAATAATTTCTAATGGTTTTGCTTTAGCGAAAAGGCAAATGATGCTTAACC 375
                        *   *  *      *      *                  *     *   *****   

consensus_9379#0      GTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGT 772
consensus_9379#2      GTTTCCGAGCAGCTTAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGTTGGTGGGGT 238
consensus_9379#1      -TTTTCAATTTGCAATAATAGC-ATGTTTCTGATAGTTCTCTTG--TAATTTTGTAACAC 431
                       *** * *   **   ***    * ***  ***  *    ****  * * ** **     

consensus_9379#0      TATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAA 832
consensus_9379#2      TATGGCCTTCCTCACTTTGCATGAAATGTTACCTCTAGCATTTGACTATGCTGGTCAAAA 298
consensus_9379#1      TTTCTTCTACCACAGTAATTATATCTTGTTCCTTTTTTCACATGTCAAAGCAAATGGCAA 491
                      * *   ** ** ** *    **    **** * * *  **  ** * * **   *   **

consensus_9379#0      ACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTT 892
consensus_9379#2      ACAGGCTGTCAAAGCAGTCTTTGTTGGCATGGCCTTCATGTCTGCAAGCTTGTATTTCTT 358
consensus_9379#1      GCAT-TTAAAGTTGCAACCCTCTCTGGTTTCGC-TGAGCCACTAGGAGTGATCATTGTTG 549
                       **   *      ***  * *   ***  * ** *      **   **     ***  * 

consensus_9379#0      GGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTC 952
consensus_9379#2      GGAGATCAGCCTGCCAAAGGAAGTGAGCTTGTAGCACATGACTATCCATACAAGCTTGTC 418
consensus_9379#1      GTATGCTA---TGTCATACGCACTTCTCT-GTAATATTTTTCTTCTGGTGTATATCCATT 605
                      * *    *   ** ** * * * *   ** ***  *  *  **     *  *      * 

consensus_9379#0      ACACTATCCTCTGAACTGAAGCGGA-GAACTTAGGAGAGATGTTAACTTTCTGAGCACTG 1011
consensus_9379#2      ACACTATCCTCTGAACTGAAGCGGA-GAACTTAGGAGAGATGTTAACTTTCTGAGCACTG 477
consensus_9379#1      GA---GTGCTGAAGGCTGATGCAAATGTGATTGCTTCAGCTTACTTGTTTCCGAGCAGCT 662
                            * **     **** **  * *   **     ** *      **** *****   

consensus_9379#0      CCAGGCAGGGA-----TGTGGGGATATATGGTTC--GCCATTTATCAAACGGAAACAAGG 1064
consensus_9379#2      CCAGGCAGGGA-----TGTGGGGATATATGGTTC--GCCATTTATCAAACGGAAACAAGG 530
consensus_9379#1      TAAATCCTGAAGTTCTTGAAGGCCTACTTGGTTCAGGTCAGTCTGTTAATAAAAAGAAAA 722
                        *  *  * *     **  **  **  ******  * ** *     **   *** **  

consensus_9379#0      ATTTGTGACTTAGATTCGCGC---GTTGGCCATGTGTATGCTATCACAGCTGGTCATTGT 1121
consensus_9379#2      ATTTGTGACTTAGATTCGCGC---GTTGGCCATGTGTATGCTATCACAGCTGGTCATTGT 587
consensus_9379#1      ACTGGTATCAGTATTCTGCATTTTGTTGACCTCCCATGTGCCTTT-CTGCAGTTGGTGGG 781
                      * * **  *     *  **     **** **     * ***  *  * ** * *  * * 

consensus_9379#0      ATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGG-GTGGCAAAACACCACCCAG 1180
consensus_9379#2      ATTTGACCATTTTACAGTGAAGATGAACAGTCTGGGATGG-GTGGCAAAACACCACCCAG 646
consensus_9379#1      GTTATGGCCTTCCTCACTTTGCATGANATGTTACCTCTAGCATTTGACTATGCTGGTCAA 841
                       **    * **   ** *    ****   **      * *  *   *  *  *    ** 

consensus_9379#0      AATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACT 1240
consensus_9379#2      AATCAGAATGTAACCTCCGCTTGTTGGGGAGGAATAGGACACAACTTGAACTAGCAGACT 706
consensus_9379#1      AAACAGGCTGTCAAAGCAGTCTTT---GTTGGCATGGCCTTCATGTCTGCAAGGTTTGTT 898
                      ** ***  *** *   * *  * *   *  ** ** *    **  *       *     *

consensus_9379#0      GATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAAT 1300
consensus_9379#2      GATCAGATCAGTCCTTTAACTTGACCAGTGTACATTGGTTGAAGGCACTGTGAGAAAAAT 766
consensus_9379#1      GA---------------------------------------------------------- 900
                      **                                                          

consensus_9379#0      AAAAATAAAAATGCTTCGTTTTCACTGTCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1356
consensus_9379#2      AAAAATAAAAATGCTTCGTT------------------------------------ 786
consensus_9379#1      --------------------------------------------------------