These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9401#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1001 fasta sequence [AACCTAGCTTAGCTAGAGCCTAGAGGAGTCATCTCCATTTCTTAGCTTCTCTCCTCACCAGAAGCCACCATGAGAGGCCCTAGCACCACCACCATGGCCACCTTCAAGCAAAGCTTCCTCAAGAACCTCCTCTCGAGCCTCAAAAGCTCCAGCAAAAACAAGGCCGCCATGTCGACCCTGAG-TGAGAGGAAGCGTGCCATCAAGTCCTCCGCCGACATCGCCATGGCCACCGCCCGCACCGGCATCGCCGGAGCAGCACGGTGGCCACATGCCATCTTGGCATCATCATCATCGTCTTCTTCATCTTCATCTTCATCTTCATCGTCATCGTCGATGCCGAGAACTACATTTCCATGCAAGATGATGCAAGGGAAGGTGAGGAGGAGGTGCAAGAGCATCGTGAGGAGGAGGACGCCATTGATGAGTAGTAGTAGTGAGGTTGCGAGGAGACTGGTGAAGAAGAGGGACAAGGTGCTGAGGAGGATGATACCCGGAGGCGAGCTCATCGCC-GACGAGATCTCGCTGCTGCACGAGGCCATGGATTACGTCGTTCATCTGCACGCCCAGGTCGACGTGCT-CCGCCGCGTCTCGAGAGCCGCCGTGGCGCGGAGATC-CAGTGCGTCTTCTTCTTCTTCAGGTGGGCTTGCACAATTG-AAGG-AACGGACGGTTCAGATCTCTGGTGAAACGGAGAACCCATGCTAGATAGTAGGA-TGT-GATTCTGAAAAGA-GGA-GCAA-GATG-TGTTGCA-GATATTGGAG-AAATATCCAAGAGGGTGATCAGATTTATGTCCCTGATCACACTTGATAAGCAAGTGCAGAAGTGCCCGGAGAAATAGAAGTGGAAGAGTGGTGGAGAGTAATCAAGATTCGTACTGTTCAAAGATGAATGAGAGGAAATTTGTAAGTTGGTGGTACTAATTGTAGTAGCCACTTTTGTACCAGAAGTAAAAGTGAAATTGATTAATTATAATGCAGAGAGATAGTACTGAAATTAAAAAAAAAAAA] [+] EMBL AK110943 [AACCTAGCTTAGCTAGAGCCTAGAGGAGTCATCTCCATTTCTTAGCTTCTCTCCTCACCAGAAGCCACCATGAGAGGCCCTAGCACCACCACCATGGCCACCTTCAAGCAAAGCTTCCTCAAGAACCTCCTCTCGAGCCTCAAAAGCTCCAGCAAAAACAAGGCCGCCATGTCGACCCTGAG TGAGAGGAAGCGTGCCATCAAGTCCTCCGCCGACATCGCCATGGCCACCGCCCGCACCGGCATCGCCGGAGCAGCACGGTGGCCACATGCCATCTTGGCATCATCATCATCGTCTTCTTCATCTTCATCTTCATCTTCATCGTCATCGTCGATGCCGAGAACTACATTTCCATGCAAGATGATGCAAGGGAAGGTGAGGAGGAGGTGCAAGAGCATCGTGAGGAGGAGGACGCCATTGATGAGTAGTAGTAGTGAGGTTGCGAGGAGACTGGTGAAGAAGAGGGACAAGGTGCTGAGGAGGATGATACCCGGAGGCGAGCTCATCGCC GACGAGATCTCGCTGCTGCACGAGGCCATGGATTACGTCGTTCATCTGCACGCCCAGGTCGACGTGCT CCGCCGCGTCTCGAGAGCCGCCGTGGCGCGGAGATC CAGTGCGTCTTCTTCTTCTTCAGGTGGGCTTGCACAATTG AAGG AACGGACGGTTCAGATCTCTGGTGAAACGGAGAACCCATGCTAGATAGTAGGA TGT GATTCTGAAAAGA GGA GCAA GATG TGTTGCA GATATTGGAG AAATATCCAAGAGGGTGATCAGATTTATGTCCCTGATCACACTTGATAAGCAAGTGCAGAAGTGCCCGGAGAAATAGAAGTGGAAGAGTGGTGGAGAGTAATCAAGATTCGTACTGTTCAAAGATGAATGAGAGGAAATTTGTAAGTTGGTGGTACTAATTGTAGTAGCCACTTTTGTACCAGAAGTAAAAGTGAAATTGATTA ] [+] EMBL CA753473 [ GAGCCTAGAGGAGTCATCTCCATTTCTTAGCTTCTCTCCTCACCAGAAGCCACCATGAGAGGCCCTAGCACCACCACCATGGCCACCTTCAAGCAAAGCTTCCTCAAGAACCTCCTCTCGAGCCTCAAAAGCTCCAGCAAAAACAAGGCCGCCATGTCGACCCTGAG TGAGAGGAAGCGTGCCATCAAGTCCTCCGCCGACATCGCCATGGCCACCGCCCGCACCGGCATCGCCGGAGCAGCACGGTGGCCACATGCCATCTTGGCATCATCATCATCGTCTTCTTCATCTTCATCTTCATCTTCATCGTCATCGTCGATGCCGAGAACTACATTTCCATGCAAGATGATGCAAGGGAAGGTGAGGAGGAGGTGCAAGAGCATCGTGAGGAGGAGGACGCCATTGATGAGTAGTAGTAGTGAGGTTGCGAGGAGACTGGTGAAGAAGAGGGACAAGGTGCTGAGGAGGATGATACCCGGAGGCCAGCTCCTCGCCGGACGAGATCTCGCTGCTGGCCCAAGCCTTGGATTCCGTTGTTCATCTGCACGCCCCGGTTCACCTTCTCCCCCCGCGTTTCTAGAGCCGCCCTGGCGCCGAAATC AAATGCGT TTCTTTCTCTT ] [+] EMBL OSS1292A [ GAGCCTAGAGGAGTCATCTCCATTTCTTAGCTTCTCTCCTCACCAGAAGCCACCATGAGAGGCCCTAGCACCACCACCATGGCCACCTTCAAGCAAAGCTTCCTCAAGAACCTCCTCTCGAGCCTCAAAAGCTCCAGCAAAAACAAGGCCGCCATGTCGACCCTGAG TNAGAGGAAGCGTGCCATCAAGTCCTCCGCCGACATCGCCATGGCCACCGCCCGCACCGGCATCGCCGGAGCAGCACGGTGGC ] [+] EMBL OSS1511A [ GAGCCTAGAGGAGTCATCTCCATTTCTTAGCTTCTCTCCTCACCAGAAGCCACCATGAGAGGCCCTAGCACCACCACCATGGCCACCTTCAAGCAAAGCTTCCTCAAGAACCTNCTCTCGAGCCTCAAAAGCTNCAGCAAAAACAAGGCCGNCATGTCGACCCTGAGTTNAGAAGAAGCGTGCCATCAAGTCCc ] [+] EMBL AU033033 [ GGAGATCNCAGTGCGTCTTCTTCTTCTTCAGGTGGGCTTGCACAATTGTAAGGTANCGGTCGGTTCAGATCNCTGGTGAAACGGAGACCCCATGCTAGATAGTAGGA TGT GATTNTGAAAAGA GGN GCAA GATG TGTTGCA GATATTGGAG AAATATCCAAGAGGGTGATCAGATTTATGTCCCTGATCACACTTGATAAGCAAGTGCAGAAGTGCCCGGAGAAATAGAAGTGGAAGAGTGGTGGAGAGTAATCAAGATTCGTACTGTTCAAAGATGAATGAGAGGAAATTTGTAAGTTGGTGGTACTAATTGTAGTAGCCACTTTTGTACCAGAAGTAAAAGTGAAATTGATTAATTATAATGCAGAGAGATAGTACTGAAATTAAAAAAAAAAAA] [+] EMBL AU161615 [ aagttangGGATTGTGGATTCTGGAAAGAGGGAGGCAAGGATGTTGTTGCAGGATATTGGAGAAAATATCCAAGAGGGTGATCAGATTTATGTCCCTGATCACACTTGATAAGCAAGTGCAGAAGTGCCCGGAGAAATAGAAGTGGAAGAGTGGTGGAGAGTAATCAAGATTCGTACTGTTCAAAGATGAATGAGAGGAAATTTGTAAGTTGGTGGTACTAATTGTAGTAGCCACTTTTGTACCAGAAGTAAAAGTGAAATTGATTAATTATAATGCAGAGAGATAGTACTGAAATTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||