These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9404#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2605 fasta sequence [AGCCCCTTCTCCAGCTTCCCCTTCCTCACCGGCCACGCCTCTCTCGCCACGCCTCTTCTCCGGCGACCGCCGCCGCCGCCGCCGAAGAGGATTCGTGAAGTGGTCCATGTCCATGTCCACGGCCGCGTCGTCGTCGGCATCGGCGGTCCGGCCGCCGCCGACGTGGGGGGCGCCGTCGCAGAGGCGGCTGGTGGAGCAGCACCTGGCGTCGCTGCCGCGCGGCCTCCCGCGGGCCGCCCACG-TGCGGGAGCTCCACGCGCAGGTGCTCAAGCAGGGCCTCCACCTCAACCCGCGCGCCGCGGCGAGGCTGGTGTCCGCCTACGCGCTCCTCCGCCTCCTCCCGTCCTCCCGCCGCGTCTTCGACGCGATCCGGGACCCGCACGCCGACGCCTTCCTCGCCAACACCATGCTCCGCGCCTACGCGCTGGGGGGCGCGCCGCGCGACGCGCTCGCCGCGTTCTCCGCCATGCCGCGCAGGGACAGCTTCACCTACTCCTTCCTCATCAAGGCGCTCTCCGCCGCGGGCGTCGCCCCGGTCCGCGCGGTGCACTCGCACGTCGTCAAGCTCGGGTCCGTCGAGGACACCTTCGTCGGGAACGCGCTTATCGACGCCTACTCCAAGAACGGCGGGTTCTCGGACGCCCGGAAGGTGTTCGACGAAATGCCGGAGCGGGATGTCGTGTCCTGGAACACGGCTATGGCGGCGATGGTGCGGGAGGGGGAGCTGGCTGGCGTGAGGAAGTTGTTTGACGAGATGCCAGAGAAGGACACGGTGAGCTGGAACACGATCCTGGATGGCTACACAAAGGCAGGGGAGGTGGAGGCGGCTTTCGAGCTGTTTCAGCGCATGCCGGAGAGGAATGTCGTGTCGTGGTCGACGATGGTTTCTGGTTACTGCAAGAAGGGTGACCTGGAGATGGCTCGGGTGATC-TTTGACAAGATGCCTAGCAAGAAC-TTGGTGACATGGACTATAATGGTCTCGGCATGTGCACAGAAAGGGCTTGTTGATGAGGCAGGTAAGTTG-TTTGCTCAGATGAAGGAGGCTTCCGTGGAACTTGATGTTGCCGCGGTTGTGAGTATCCTGGCTGCGTGTGCAGAGTCAGGCTCTCTTTCACTTGGAAAGAGGATTCACCGATACGTGCGAAAGAGGAATCTAGGGAGATCAACCCATGTGTGCAATGCACTGATTGACATGTTTTGCAAATGTGGGTGTGTGAACCGAGCGGATTATGTCTTTGACACTGAGACTGTTCAGAAGGATTCGGTGTCATGGAACAGCATCATTGGAGGTTTTGCAATGCATGGGCATGGAGACAAGGCACTGGAGCTCTTTGCTCAAATGAAGCAACAGGGATTTAACCCTGATGCTGTGACAATAATCAATGTTCTTAGTGCATGCACACACATGGGGTTTGTGGATGAGGGCCGCCGGCATTTCTCCAACATGGAGAGGGATTATGGCATCATGCCTCAGATAGAGCATTACGGTTGTATGATCGACCTTCTTGGCCGTGGAGGGCTCATCAAGGAAGCTGTCGACCTCATCAAAAGCATGCCTTGGGAGCCTAATGAGGTTATATGGGGATCCCTTCTCAGTGCATGCCGACTGCATAAGAATGTGGAGTATGCAGAAATAGCAGTGAACGAGTTGAGCAAGCTGCAGCCGTCGAATGCAGGGAACTATGCTGTCCTCTCGAACATCTATGCTGAGGCTGGGCAGTGGAGTGACATGGCAAAGGCAAGGATGCAGATGAAAGGAACTGGGTCGCAGAAAACAGCAGGATCAAGCTGGGTCGAACTCAATGAGACGTTCCATGAGTTCACCGTGGGGGATAGAAAGCACCAAGATTCAGACCAGATATCTGAGATGGTTGACAGATTGAGCTCGCATGTTAAGCATGTTGGCTGTGTTCCAGCAGGCCATGAGCTGCTTGTGCAGTGAGTCGTTTATTAGGGCAATGCATGCT-TATAGGCTATTGCAAATTTGGGAACCTCTGCCTGGTCATTAACCTTGCAGATCATGTGATCTGAAGAAAGGAAGCACCATTCCTTGTACTGCCTGCAATCAAGAAGGTGGTAGGACATGGTACAGAAGCTTCTTTGATTGAGTGAACAGCCTTGGATGTGTTGAAAGCTTGAGGCATTCATCAGCTTCTGCGCATCTGCCATCAGGTTTGCTCTGTTAATGACTGTTACCATGACGACAGATGATGATGGGGGTGACTGACAAAACACTGACAATGGTCGGATAGTTCATGGTTAGGGCCTTCACTTCATCTGGTTAGACAAAACCGAAACAAAGGTTTATGGTTAGGGCCTTCTGAAAAAGCAGAAGACAGGAACTCAAGATTCAACAGAGCAGCATTTTTCTCTTTCCACTGCAACAGTACAATGTTAGCGCATAAGAATAGTATATTTTGGAGGTTTTACAGTTCTTGACTTCATATTTTACATGTATCATCCTTTTCTAAACGAACGTATGAATGAAGAAGTATATATTGTTCTATCAAATTTCAATGCAGATATCTTCATGCATTGAGAACAAAAAAATGGTTTTTCCCCTAAATACCCGTAAAAAAAAAAAAAAAAAAAAAAAAAGAAAAAA] [+] EMBL AK106299 [AGCCCCTTCTCCAGCTTCCCCTTCCTCACCGGCCACGCCTCTCTCGCCACGCCTCTTCTCCGGCGACCGCCGCCGCCGCCGCCGAAGAGGATTCGTGAAGTGGTCCATGTCCATGTCCACGGCCGCGTCGTCGTCGGCATCGGCGGTCCGGCCGCCGCCGACGTGGGGGGCGCCGTCGCAGAGGCGGCTGGTGGAGCAGCACCTGGCGTCGCTGCCGCGCGGCCTCCCGCGGGCCGCCCACG TGCGGGAGCTCCACGCGCAGGTGCTCAAGCAGGGCCTCCACCTCAACCCGCGCGCCGCGGCGAGGCTGGTGTCCGCCTACGCGCTCCTCCGCCTCCTCCCGTCCTCCCGCCGCGTCTTCGACGCGATCCGGGACCCGCACGCCGACGCCTTCCTCGCCAACACCATGCTCCGCGCCTACGCGCTGGGGGGCGCGCCGCGCGACGCGCTCGCCGCGTTCTCCGCCATGCCGCGCAGGGACAGCTTCACCTACTCCTTCCTCATCAAGGCGCTCTCCGCCGCGGGCGTCGCCCCGGTCCGCGCGGTGCACTCGCACGTCGTCAAGCTCGGGTCCGTCGAGGACACCTTCGTCGGGAACGCGCTTATCGACGCCTACTCCAAGAACGGCGGGTTCTCGGACGCCCGGAAGGTGTTCGACGAAATGCCGGAGCGGGATGTCGTGTCCTGGAACACGGCTATGGCGGCGATGGTGCGGGAGGGGGAGCTGGCTGGCGTGAGGAAGTTGTTTGACGAGATGCCAGAGAAGGACACGGTGAGCTGGAACACGATCCTGGATGGCTACACAAAGGCAGGGGAGGTGGAGGCGGCTTTCGAGCTGTTTCAGCGCATGCCGGAGAGGAATGTCGTGTCGTGGTCGACGATGGTTTCTGGTTACTGCAAGAAGGGTGACCTGGAGATGGCTCGGGTGATC TTTGACAAGATGCCTAGCAAGAAC TTGGTGACATGGACTATAATGGTCTCGGCATGTGCACAGAAAGGGCTTGTTGATGAGGCAGGTAAGTTG TTTGCTCAGATGAAGGAGGCTTCCGTGGAACTTGATGTTGCCGCGGTTGTGAGTATCCTGGCTGCGTGTGCAGAGTCAGGCTCTCTTTCACTTGGAAAGAGGATTCACCGATACGTGCGAAAGAGGAATCTAGGGAGATCAACCCATGTGTGCAATGCACTGATTGACATGTTTTGCAAATGTGGGTGTGTGAACCGAGCGGATTATGTCTTTGACACTGAGACTGTTCAGAAGGATTCGGTGTCATGGAACAGCATCATTGGAGGTTTTGCAATGCATGGGCATGGAGACAAGGCACTGGAGCTCTTTGCTCAAATGAAGCAACAGGGATTTAACCCTGATGCTGTGACAATAATCAATGTTCTTAGTGCATGCACACACATGGGGTTTGTGGATGAGGGCCGCCGGCATTTCTCCAACATGGAGAGGGATTATGGCATCATGCCTCAGATAGAGCATTACGGTTGTATGATCGACCTTCTTGGCCGTGGAGGGCTCATCAAGGAAGCTGTCGACCTCATCAAAAGCATGCCTTGGGAGCCTAATGAGGTTATATGGGGATCCCTTCTCAGTGCATGCCGACTGCATAAGAATGTGGAGTATGCAGAAATAGCAGTGAACGAGTTGAGCAAGCTGCAGCCGTCGAATGCAGGGAACTATGCTGTCCTCTCGAACATCTATGCTGAGGCTGGGCAGTGGAGTGACATGGCAAAGGCAAGGATGCAGATGAAAGGAACTGGGTCGCAGAAAACAGCAGGATCAAGCTGGGTCGAACTCAATGAGACGTTCCATGAGTTCACCGTGGGGGATAGAAAGCACCAAGATTCAGACCAGATATCTGAGATGGTTGACAGATTGAGCTCGCATGTTAAGCATGTTGGCTGTGTTCCAGCAGGCCATGAGCTGCTTGTGCAGTGAGTCGTTTATTAGGGCAATGCATGCT TATAGGCTATTGCAAATTTGGGAACCTCTGCCTGGTCATTAACCTTGCAGATCATGTGATCTGAAGAAAGGAAGCACCATTCCTTGTACTGCCTGCAATCAAGAAGGTGGTAGGACATGGTACAGAAGCTTCTTTGATTGAGTGAACAGCCTTGGATGTGTTGAAAGCTTGAGGCATTCATCAGCTTCTGCGCATCTGCCATCAGGTTTGCTCTGTTAATGACTGTTACCATGACGACAGATGATGATGGGGGTGACTGACAAAACACTGACAATGGTCGGATAGTTCATGGTTAGGGCCTTCACTTCATCTGGTTAGACAAAACCGAAACAAAGGTTTATGGTTAGGGCCTTCTGAAAAAGCAGAAGACAGGAACTCAAGATTCAACAGAGCAGCATTTTTCTCTTTCCACTGCAACAGTACAATGTTAGCGCATAAGAATAGTATATTTTGGAGGTTTTACAGTTCTTGACTTCATATTTTACATGTATCATCCTTTTCTAAACGAACGTATGAATGAAGAAGTATATATTGTTCTATCAAATTTCAATGCAGATATCTTCATG ] [+] EMBL CB672908 [ GCCACGCCTCTTCTCCGGCGACCGCCGCCGCCGCCGCCGAATAGGATTCGTGAAGTGGTCCATGTCCATGTCCACGGCCGCGTCGTCCTCAGCATCGGCGGTCCGGCCGCCGCCGACGTGGGGGGCGCCGTCTCAAAGGCGGCTGGTGGAGCAGCACCTGGCGTCACTGCCGCGCGGCCTCCCGCGGGCCGCCCACGTTGCGGAAGCTCCACGCGCAGGTGGTCATGCAGGGCCTCCACCTCAACCCGCGCGCCGCGGTGAGGCTGGTGTCCGCCTACGCGCTCCTCCGCCTCCTCCCGTCCTCCCGCCGCGTCTTCTACGCGATCCGGGACCCGCACGCCGACGCCTTCCTCGCCAACACCATGCTCCGCGCCTACGCGCTGGGGGGCGCGCCGCGCGACGCGCTCGCCGCGTTCTCCGCCATGCCGCGCAGGGACAGCTTCGCCTACTCCTTCCTCATCAAGGCGCTCTCCGCCGCGGGCGTCGCCCCGGTCCGCGCGGTGCACTCGCACGTCGTCAAGCTCGGGTCCGGCCAGGAC ] [+] EMBL AU055847 [ CGGGTTCTCGGACGCCCGGAAGGTGTTCGACGAAATGCCGGAGCGGGATGTCGTGTCCTGGAACACGGCTATGGCGGCGATGGTGCGGGAGGGGGAGCTGGCTGGCGTGAGGAAGTTGTTTGACGAGATGCCAGAGAAGGACACGGTGAGCTGGAACACGATCCTGGATGGCTACACAAAGGCAGGGGAGGTGGAGGCGGCTTTCGAGCTGTTTCAGCGCATGCCGGAGAGGAATGTCGTGTCGTGGTCGACGATGGTTTCTGGTTACTGCAAGAAGGGTGACCTGGAGATGGCTCGGGTGATCTTTTGACAAGATGCCTAGCAAGAACTTTGGTGACATGGACTATAATGGTCTCGGCATGTGCACAGAAANGGCTTGTTGATGAAGCAAGTAAATTGTTTTCCCCANATGAAag ] [-] EMBL CB672909 [ CATGGCAAAGGCAAGGATGCAGATGAAAGGAACTGGGTCGCAGAAAACAGCAGGATCAAGCTGGGTCGAACTCAATGAGACGTTCCATGAGTTCACCGTGGGGGATAGAAAGCACCAAGATTCAGACCAGATATCTGAGATGGTTGACAGATTGAGCTCGCATGTTAAGCATGTTGGCTGTGTTCCAGCAGGCCATGAGCTGCTTGTGCAGTGAGTCGTTTATTAGGGCAATGCATGCT TATAGGCTATTGCAAATTTGGGAACCTCTGCCTGGTCATTAACCTTGCAGATCATGTGATCTGAAGAAAGGAAGCACCATTCCTTGTACTGCCTGCAATCAAGAAGGTGGTAGGACATGGTACAGAAGCTTCTTTGATTGAGTGAACAGCCTTGGATGTGTTGAAAGCTTGAGGCATTCATCAGCTTCTGCGCATCTGCCATCAGGTTTGCTCTGTTAATGACTGTTACCATGACGACAGATGATGATGGGGGTGACTGACAAAACACTGACAATGGTCGGATAGTTCATGGTTAGGGCCTTCACTTCATCTGGTTAGACAAAACCGAAACAAAGGTTTATGGTTAGGGCCTTCTGAAAAAGCAGAAGACAGGAACTCAAGATTCAACAGAGCAGCATTTTTCTCTTTCCACTGCAACAGTACAATGTTAGCGCATAAGAATAGTATATTTTGGAGGTTTTACAGTTCTTGACTTCATATTTTACATGTATCATCCTTTTCTAAACGAAGGTATGAATGAAGAAGTATATATTGTTCTATCA ] [+] EMBL AU055848 [ cAGATTCAGACCAGATATCTGAGATGGTTGACAGATTGAGCTCGCATGTTAAGCATGTTGGCTGTGTTCCAGCAGGCCATGAGCTGCTTGTGCAGTGAGTCGTTTATTAGGGCAATGCATGCT TATAGGCTATTGCAAATTTGGGAACCTCTGCCTGGTCATTAACCTTGCNGATCATGTGATCTGAAGAAAGGAAGCACCATTCCTTGTACTGCCTGCAATCAAGAAGGTGGTAGGACATGGTACAGAAGCTTCTTTGATTGAGTGAACAGCCTTGGATGTGTTGAAAGCTTGAGGCATTCATCAGCTTCTGCGCATCTGCCATCAGGTTTGCTCTGTTAATGACTGTTACCATGACGACAGATGATGATGGGGGTGACTGACAAAACACTGACAATGGTCGGATAGTTCATGGTTAGGGCCTTCACTTCATCTGGTTAGACAAAACCGAAACAAAGGTTTATGGTTAGGGCCTTCTGAAAAAGCAGAAGACAGGAACTCAAGATTCAACAGAGCAGCATTTTTCTCTTTCCACTGCAACAGTACAATGTTAGCGCATAAGAATAGTATATTTTGGAGGTTTTACAGTTCTTGACTTCATATTTTACATGTATCATCCTTTTCTAAACGAACGTATGAATGAAGAAGTATATATTGTTCTATCAAATTTCAATGCAGATATCTTCATGCATTGAGAACAAAAAAA ] [-] EMBL CA761535 [ CATGACCGGCTTGTCCAGGGAGTTGTTTATTAGGCCAAGGCATGCTATA AGGCTGTTGCAAATTTGGAAACCTCTGCCTGGTCATTAACCTTGCAGATCATGTGATCTGAAAAAAGGAAGCTCCATTCCTTGTACTGCCTGCAATCAAAAAGGTGGTAGGCCATGGTATAGAAGCTTCCTTGATTGAGTGAGCAGCCTGGGATGTGTTGAAAGCCTGAGGCATTTATCAGGTTTTGCGCATATGCCATCAGGTATGCTCTGTTAATGGCTGTTACCATGACGACAGATGTTGATGGGGGTGCCTGACAAAACACTGACAATGGTCGGATAGTTCATGGTTAGGGCCTTCACTTTATCTGGTTAGGCAAAACCGAAACAAAGGTTTATGGTTAGGGCCTTCTGAAAAAGCAGAAGTCCGGAACTCAAGATTCAACAAAGCAGCATTTTTCTCTTTCCCCTGCAACAGTACAATGTTAGCCCATAAGAATTGTATATTTTGGAGGTTTTACAGTTCTTGGCTTCATATTTTACAAGTATCATCCTTTTTTAAACGAACGTATGAATGAAGAAGTATATATTGTTCTATCAAATTTCAATGCAGACATCTTCCCGCCTTGAGAACAtatttgtggtttttcccctaaatacccgtaaaaaaaaaaaaaaaaaaaaaaaaagaaaaaa] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||