These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9405#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 700 fasta sequence [GCTTGTCTGTCCCTTCGCTTCAACTTCTCTCTCTCGCTCCGAATAAAAACAGCAGAGGAAAACGTGAGCAGAAACCGCAGAGATATTGATCAAAAGCTGCG-TTTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC-CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC-ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCGTCGTCCTATGAGCAGGAGCAGCACGCGCTGCTGGCTGCAGTTCAGGAGGACCTCGTGAAGGCCAACGACGAGTTGGTGGATAATGATAACGAGAAGGGGAAA] [+] EMBL CB632765 [GCTTGTCTGTCCCTTCGCTTCAACTTCTCTCTCTCGCTCCGAATAAAAACAGCAGAGGAAAACGTGAGCAGAAACCGCAGAGATATTGATCAAAAGCTGCG TTTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG ] [+] EMBL CB643970 [ TGCGCTCTTTTTCCCTTCTTTTTTTGGCAGCAAGTTAATTCCACCCTCCACTCCTCCATGTTCTTCTACTAGTGGCACAGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG ] [+] EMBL AK073937 [ AGCAGAGCGGCCACAACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTCAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG ] [+] EMBL CB631873 [ ACCGCTCACCTCACCACTCGCTTCCTCCAATTTCGCATTCGAGGCGACTCCTTTGGTTAGAGTACTAAAGGTGCACGAACCAAGAACCATAAGCAGAAGCGGAATCAGAGGCAGCAGTGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCAAAGAGCAACGGCAAGGCGGATGCGAAGGGCACGCCGCCGACGCCCGAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAATAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAATCCCGCTCAAGAGTCGGGGGCCGCTAAGCCGTCACCTCCAGAGCCGGTGGCCGTGAAGCCGTCGTCCTATGAGCAGGAGCAGCACGCGCTGCTGGCTGCAGTTCAGGAGGACCTCGTGAAGGCCAACGACGAGTTGGTGGATAATGATAACGAGAAGGGGAAA] [+] EMBL CB631909 [ ACCGCTCACCTCACCACTC CTTCCTCCAATTTCGCATTCAAGGCGACTCCTTTGGTTAGAGTAGTAGAGGTGCACGAACCAAGAACCAGAAGCAGAAGCGGAAGCAGAGGCAGCAATGCAGGGCTCCAAGACCAAATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACAAGTCCCAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTCCCGGATC ACCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGTGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCG ] [+] EMBL CB640327 [ AATCTGGCCATGCCGAGGCGAAGAGCAACGGCAAGGCGGAGGCGAAGGGCACGCCGCCGACGCCCAAGAGCGCCAAGATTGCGAGGAAGCCGGCCGTGCCCAAGGCGCCGCCGCGCCCCTCCGCCGACTTGTTTTAGTCCCCCGGCTCGGCCGACCGCAAGAAGAGCGCCTTCTTTTTCTATCACCCCTCCAGAGAAGCAAGGGAAGGCGACGAAGCCCGCTCAGGAGTCGGCGGCCGCGAAGCCGTCGCCTCAAGAGCCGGTGGCCGTGAAGCCGTCGTCCCAGGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||