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Oryza sativa
cluster # 9406 cluster # 9406       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9406#0 length = 2053 sequences # 5  
consensus_9406#1 length = 761 sequences # 1  

consensusID : consensus_9406#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2053
fasta sequence
                              [GTTCCCTCTCTCCTCCTCCTCCGTCAGTCTGTCGTCGAACTCCATTGCGAGCTCACAAGGGTTCAGCACACCAACCACCAACCGTTGGGCTCGAGTTCTACCAACCTCCCTTTTCTAGTCGGGCTACAAATTTTCAGCAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTCACGAAGATCAGTGATGCTTTAGCAGATGAAATCACTAAAGAATTGATTGTGAAACTGTCTGAAAAGGTTAATAATCTGAAGGATCTGGATGAAAAGATTGAGCAAATGAGGAAGCAATTGACAACCATGAACAACGTTATATTGCAGATGGGCATGATATACCTCACCGATGAAGTCGTCAAGGGTTGGATTGGTGAGGTGAGGAAGGTGGCGTACCGTGTTGAGGACGTCATGGACAAATACTTGAATTACTCCATGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGGATCACATCCTTAAAAAATACTTCATCAAAGGATCACATTATGTTTTGGTTTTCACTCAAATTGCTGATGAGGTAGTCAAGATAGAAAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGTTGCATCCATCCCAGCTTGTTTCTGACCCACTCACTGAGATGGGAAGACAGAGGTCCCGGGACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAGTAGGAGACTGCTGACTGAATGGCTGTACGCTGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTATGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACTTCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAGGAAGCTGCTTAGGAAAGTTGGTTACACAGAACCACCACTGTCATGTAACATTGACAAAATGGATGTGTATGATTTGAAAGAGGAAATAAAGCGAATGCTCAAAGTTAGAAAATGCTTGATCGTACTTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATGACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCTCAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCAGAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACGGAACTCGTGAAAGTTGCCAAATC-TATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCCTGTCTTCAA-GATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTGAGTTGTCAAAGAACAATCATGTCCGA-GCAATTTTAAATAT-GAGCTACCATGACCTGTCAGGAGACCTAAGAAACTGC-TTTTTGTACTGCAGCCTATTCCC-GGAAGACTACCCGCTCTCCCGT-GAGAGCC-TTGT-GCGTCTGT-GGATTGCAGAAGGC-TTTGT-CCTGAGGAAA-GAGAACAACACACCAGAGGCAGTAGCTGAGGGAAATCTCATGGAATTGATATACAGGAATATGCTTCAAGTTACAGAGTATGATGATCTCGGCAGGGTGAATACTTGTGGAATGCATGACATTATGCGAGACCTGGCCCTTTCTGCTGCTAAAGAGGAGAAGTTTGGCTCTGNCAATGATTTTGGCACAATGGTAGAGATTGATAAGGATGTTCGTCGTCTGTCAACTTACCGATGGAAAGACAGTACTGCACCAATTCTCAAACTTCTACGTCTTCGAAACATAGTATCACTTGAAGCATTTTCATCTTCCATTGATATGTTGTCCTCAGTTTTGTCTCACTCAAGCTACCTTACTGTTCTCGAGCTTCAAGATTCAGAAATCACTCAAGTTCCACCATCTATAGGGAATTTGTTTAANCTACGTNACATTGGCTTACGGAGGACCAAGGTTAAGTCACTCCCAGACTCCATTGAAAAGTTGCTGAACCTCCANACTCTGGA]

[+] EMBL AK068380             [GTTCCCTCTCTCCTCCTCCTCCGTCAGTCTGTCGTCGAACTCCATTGCGAGCTCACAAGGGTTCAGCACACCAACCACCAACCGTTGGGCTCGAGTTCTACCAACCTCCCTTTTCTAGTCGGGCTACAAATTTTCAGCAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTCACGAAGATCAGTGATGCTTTAGCAGATGAAATCACTAAAGAATTGATTGTGAAACTGTCTGAAAAGGTTAATAATCTGAAGGATCTGGATGAAAAGATTGAGCAAATGAGGAAGCAATTGACAACCATGAACAACGTTATATTGCAGATGGGCATGATATACCTCACCGATGAAGTCGTCAAGGGTTGGATTGGTGAGGTGAGGAAGGTGGCGTACCGTGTTGAGGACGTCATGGACAAATACTTGAATTACTCCATGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGGATCACATCCTTAAAAAATACTTCATCAAAGGATCACATTATGTTTTGGTTTTCACTCAAATTGCTGATGAGGTAGTCAAGATAGAAAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGTTGCATCCATCCCAGCTTGTTTCTGACCCACTCACTGAGATGGGAAGACAGAGGTCCCGGGACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAGTAGGAGACTGCTGACTGAATGGCTGTACGCTGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTATGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACTTCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAGGAAGCTGCTTAGGAAAGTTGGTTACACAGAACCACCACTGTCATGTAACATTGACAAAATGGATGTGCATGATTTGAAAGAGGAAATAAAGCGAATGCTTAAAGGTAAAAAATGCTTGATCGTACCTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATGACCAAGGAAGTCGCGTAATAATCACAATGCGGAAGAATCATGTGGCAGCTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU065271             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACACTGTGGATGCTCTATTAAGGAAGCTGCTTTGGAAAGTTGGTTACACAGAACCACCACTGTCAAGTAACATTGACAAAATGGATGTGTATGATTTGAAAGAGGAAATAAAGCGAATGCTCAAAGTTAGAAAATGCTTGATCGTACTTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATGACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCTCAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCAGAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACGGAACTCGTGAAAGTTGCCAAATCTTATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCCTGTCTTCAAGGATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTGAGTTGTCAAAGAACAATCATGTCCGAGGCAATTTTAAATATGGAGCTACCATGACCTGTCAGGAGACCTTAGAAACTGCTTTTTTGGACTGCAGCCTATTCCCGGGAAGACTANCCGCTCTNCCGTGGAGAGCCTTTGTGGCGTNTGTGGGATTGCAGAAGGCTTTTGTNCCTGAGGAAAGGAG ACAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB631222             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGTGTATGATTTGAAAGAGGAAATAAAGCGAATGCTCAAAGTTAGAAAATGCTTGATCGTACTTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATGACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCTCAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCAGAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACAGAACTCGTGAAAGTTGCCAAATC TATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCCTGTCTTCAA GATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTGAGTTGTCAAAGAACAATCATGTCCGA GCAATTTTAAATAT GAGCTACCATGACCTGTCAGGAGACCTAAGAAACTGC TTTTTGTACTGCAGCCTATTCCC GGAAGACTACCCGCTCTCCCGT GAGAGCC TTGT GCGTCTGT GGATTGCAGAAGGC TTTGT CCTGAGGAAA GAGAACAACACACCAGAGGCAGTAGCTGAGGGAAATCTCATGGAATTGATATACAGGAATATGCTTCAAGTTACAGAGTATGATGATCTCGGCAGGGTGAATACTTGTGGAATGCATGACATTATGCGAGACCTGGCCCTTTCTGCTGCTAAAGAGGAGAAGTTTGGCTCTGNCAATGATTTTGGCACAATGGTAGAGATTGATAAGGATGTTCGTCGTCTGTCAACTTACCGATGGAAAGACAGTACTGCACCAATTCTCAAACTTCTACGTCTTCGAAACATAGTAT                                                                                                                                                                                                                      ]
[+] EMBL CB639156             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAGCATACTTTCAAATACGTGATGCATTCCAGAATGACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCTCAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCAGAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACGGAACTCGTGAAAGTTGCCAAATC TATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCCTGTCTTCAA GATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTGAGTTGTCAAAGAACAATCATGTCCGA GCAATTTTAAATAT GAGCTACCATGACCTGTCAGGAGACCTAAGAAACTGC TTTTTGTACTGCAGCCTATTTCC GGAAGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU056102             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AATCAACTTAGAAGTGAGTTGTCAAAGAACAATCATGTCCGA GCAATTTTAAATAT GAGCTACCATGACCTGTCAGGAGACCTAAGAAACTGC TTTTTGTACTGCAGCCTATTCCC GGAAGACTACCCGCTCTCCCGT GAGAGCC TTGT GCGTCTGT GGATTGCAGAAGGC TTTGT CCTGAGGAAA GAGAACAACACACCAGAGGCAGTAGCTGAGGGAAATCTCATGGAATTGATATACAGGAATATGCTTCAAGTTACAGAGTATGATGATCTCGGCAGGGTGAATACTTGTGGAATGCATGACATTATGCGAGACCTGGCCCTTTCTGCTGCTAAAGAGGAGAAGTTTGGCTCTGCAAATGATTTTGGCACAATGGTAGAGATTGATAAGGATGTTCGTCGTCTGTCAACTTACCGATGGAAAGACAGTACTGCACCAATTCTCAAACTTCTACGTCTTCGAACCATAGTATCACTTGAAGCATTTTCATCTTCCATTGATATGTTGTCCTCAGTTTTGTCTCACTCAAGCTACCTTACTGTTCTCGAGCTTCAAGATTCAGAAATCACTCAAGTTCCACCATCTATAGGGAATTTGTTTAANCTACGTNACATTGGCTTACGGAGGACCAAGGTTAAGTCACTCCCAGACTCCATTGAAAAGTTGCTGAACCTCCANACTCTGGA]


>consensus_9406#0 GTTCCCTCTCTCCTCCTCCTCCGTCAGTCTGTCGTCGAACTCCATTGCGAGCTCACAAGG GTTCAGCACACCAACCACCAACCGTTGGGCTCGAGTTCTACCAACCTCCCTTTTCTAGTC GGGCTACAAATTTTCAGCAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTCACGAAGAT CAGTGATGCTTTAGCAGATGAAATCACTAAAGAATTGATTGTGAAACTGTCTGAAAAGGT TAATAATCTGAAGGATCTGGATGAAAAGATTGAGCAAATGAGGAAGCAATTGACAACCAT GAACAACGTTATATTGCAGATGGGCATGATATACCTCACCGATGAAGTCGTCAAGGGTTG GATTGGTGAGGTGAGGAAGGTGGCGTACCGTGTTGAGGACGTCATGGACAAATACTTGAA TTACTCCATGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGGATCACA TCCTTAAAAAATACTTCATCAAAGGATCACATTATGTTTTGGTTTTCACTCAAATTGCTG ATGAGGTAGTCAAGATAGAAAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGT TGCATCCATCCCAGCTTGTTTCTGACCCACTCACTGAGATGGGAAGACAGAGGTCCCGGG ACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAGTAGGAGAC TGCTGACTGAATGGCTGTACGCTGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTA TGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACT TCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAGGA AGCTGCTTAGGAAAGTTGGTTACACAGAACCACCACTGTCATGTAACATTGACAAAATGG ATGTGTATGATTTGAAAGAGGAAATAAAGCGAATGCTCAAAGTTAGAAAATGCTTGATCG TACTTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATG ACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCT CAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCA GAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACGGAACTCGTGAAAGTTGCCA AATCTATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCC TGTCTTCAAGATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTG AGTTGTCAAAGAACAATCATGTCCGAGCAATTTTAAATATGAGCTACCATGACCTGTCAG GAGACCTAAGAAACTGCTTTTTGTACTGCAGCCTATTCCCGGAAGACTACCCGCTCTCCC GTGAGAGCCTTGTGCGTCTGTGGATTGCAGAAGGCTTTGTCCTGAGGAAAGAGAACAACA CACCAGAGGCAGTAGCTGAGGGAAATCTCATGGAATTGATATACAGGAATATGCTTCAAG TTACAGAGTATGATGATCTCGGCAGGGTGAATACTTGTGGAATGCATGACATTATGCGAG ACCTGGCCCTTTCTGCTGCTAAAGAGGAGAAGTTTGGCTCTGNCAATGATTTTGGCACAA TGGTAGAGATTGATAAGGATGTTCGTCGTCTGTCAACTTACCGATGGAAAGACAGTACTG CACCAATTCTCAAACTTCTACGTCTTCGAAACATAGTATCACTTGAAGCATTTTCATCTT CCATTGATATGTTGTCCTCAGTTTTGTCTCACTCAAGCTACCTTACTGTTCTCGAGCTTC AAGATTCAGAAATCACTCAAGTTCCACCATCTATAGGGAATTTGTTTAANCTACGTNACA TTGGCTTACGGAGGACCAAGGTTAAGTCACTCCCAGACTCCATTGAAAAGTTGCTGAACC TCCANACTCTGGA



consensusID : consensus_9406#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 761
fasta sequence
                              [GATCGTCATCAAATAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTAACGAAGATCGGTGATGCTTTAGCAAATGATCTCTCTAAAGAATTGATTGCCAAACTGTCTGAAAAGGTTAATAATCTAAAGGATCTGGATGAGAAGATTGAGCAAATGAGGAAACAATTGACAACCATGAACAACGTTATATTGCAGATAGGCACGACATACCTCACTGATGAAGTCGTCAAGGGTTGGATTGGGGAGGTAAGGAAGGTGGCCTACCGTGTTGAGGATGTCATGGACAAATACTCGTATTACTCTGTGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGCATCACATTATGTTTCAGTTTTCACTGAAATTGCTAATGAGGTAGTCAAGATAGAGAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGTTGCATCCATCCCAGCTTGTTTCTGACCCGCTCACTGAGATGGAAAGACAGAGGTCCCGGGACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAACAGGAGACTGCTGACTGAATGGTTGTACACCGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTATGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACTTCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAAGAAGCTGCTTTGGAAAAT]

[+] EMBL CB627133             [GATCGTCATCAAATAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTAACGAAGATCGGTGATGCTTTAGCAAATGATCTCTCTAAAGAATTGATTGCCAAACTGTCTGAAAAGGTTAATAATCTAAAGGATCTGGATGAGAAGATTGAGCAAATGAGGAAACAATTGACAACCATGAACAACGTTATATTGCAGATAGGCACGACATACCTCACTGATGAAGTCGTCAAGGGTTGGATTGGGGAGGTAAGGAAGGTGGCCTACCGTGTTGAGGATGTCATGGACAAATACTCGTATTACTCTGTGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGCATCACATTATGTTTCAGTTTTCACTGAAATTGCTAATGAGGTAGTCAAGATAGAGAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGTTGCATCCATCCCAGCTTGTTTCTGACCCGCTCACTGAGATGGAAAGACAGAGGTCCCGGGACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAACAGGAGACTGCTGACTGAATGGTTGTACACCGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTATGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACTTCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAAGAAGCTGCTTTGGAAAAT]


>consensus_9406#1 GATCGTCATCAAATAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTAACGAAGATCGGT GATGCTTTAGCAAATGATCTCTCTAAAGAATTGATTGCCAAACTGTCTGAAAAGGTTAAT AATCTAAAGGATCTGGATGAGAAGATTGAGCAAATGAGGAAACAATTGACAACCATGAAC AACGTTATATTGCAGATAGGCACGACATACCTCACTGATGAAGTCGTCAAGGGTTGGATT GGGGAGGTAAGGAAGGTGGCCTACCGTGTTGAGGATGTCATGGACAAATACTCGTATTAC TCTGTGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGCATCACATTAT GTTTCAGTTTTCACTGAAATTGCTAATGAGGTAGTCAAGATAGAGAAGGAAATCAAACAA GTTATAGAACTCAAGGATCAGTGGTTGCATCCATCCCAGCTTGTTTCTGACCCGCTCACT GAGATGGAAAGACAGAGGTCCCGGGACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTT GTGGGGATTGAAGACAACAGGAGACTGCTGACTGAATGGTTGTACACCGACGAGCTGGAC AGTAAGGTGATAACAGTGTCAGGTATGGGCGGACTGGGGAAAACCACCCTGGTCACAAAT GTGTATGAACGTGAAAAGATCAACTTCTCTGCTCATGCATGGATGGTTGTGTCTCAAACC TACACTGTGGATGCTCTATTAAAGAAGCTGCTTTGGAAAAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9406#0      GTTCCCTCTCTCCTCCTCCTCCGTCAGTCTGTCGTCGAACTCCATTGCGAGCTCACAAGG 60
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      GTTCAGCACACCAACCACCAACCGTTGGGCTCGAGTTCTACCAACCTCCCTTTTCTAGTC 120
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      GGGCTACAAATTTTCAGCAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTCACGAAGAT 180
consensus_9406#1      ----GATCGTCATCAAATAGCACAAATGGCAGAGGCGGTCCTCCTTGCTCTAACGAAGAT 56
                           *      *  *  ********************************* ********

consensus_9406#0      CAGTGATGCTTTAGCAGATGAAATCACTAAAGAATTGATTGTGAAACTGTCTGAAAAGGT 240
consensus_9406#1      CGGTGATGCTTTAGCAAATGATCTCTCTAAAGAATTGATTGCCAAACTGTCTGAAAAGGT 116
                      * ************** ****  ** ***************  *****************

consensus_9406#0      TAATAATCTGAAGGATCTGGATGAAAAGATTGAGCAAATGAGGAAGCAATTGACAACCAT 300
consensus_9406#1      TAATAATCTAAAGGATCTGGATGAGAAGATTGAGCAAATGAGGAAACAATTGACAACCAT 176
                      ********* ************** ******************** **************

consensus_9406#0      GAACAACGTTATATTGCAGATGGGCATGATATACCTCACCGATGAAGTCGTCAAGGGTTG 360
consensus_9406#1      GAACAACGTTATATTGCAGATAGGCACGACATACCTCACTGATGAAGTCGTCAAGGGTTG 236
                      ********************* **** ** ********* ********************

consensus_9406#0      GATTGGTGAGGTGAGGAAGGTGGCGTACCGTGTTGAGGACGTCATGGACAAATACTTGAA 420
consensus_9406#1      GATTGGGGAGGTAAGGAAGGTGGCCTACCGTGTTGAGGATGTCATGGACAAATACTCGTA 296
                      ****** ***** *********** ************** **************** * *

consensus_9406#0      TTACTCCATGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGGATCACA 480
consensus_9406#1      TTACTCTGTGCAAATGGCGGAAGAATGGTTCCTTAAAAAATACTTCATCAAAGCATCACA 356
                      ******  ********************************************* ******

consensus_9406#0      TCCTTAAAAAATACTTCATCAAAGGATCACATTATGTTTTGGTTTTCACTCAAATTGCTG 540
consensus_9406#1      T-------------------------------TATGTTTCAGTTTTCACTGAAATTGCTA 385
                      *                               *******  ********* ******** 

consensus_9406#0      ATGAGGTAGTCAAGATAGAAAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGT 600
consensus_9406#1      ATGAGGTAGTCAAGATAGAGAAGGAAATCAAACAAGTTATAGAACTCAAGGATCAGTGGT 445
                      ******************* ****************************************

consensus_9406#0      TGCATCCATCCCAGCTTGTTTCTGACCCACTCACTGAGATGGGAAGACAGAGGTCCCGGG 660
consensus_9406#1      TGCATCCATCCCAGCTTGTTTCTGACCCGCTCACTGAGATGGAAAGACAGAGGTCCCGGG 505
                      **************************** ************* *****************

consensus_9406#0      ACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAGTAGGAGAC 720
consensus_9406#1      ACAGCTTCCCAGAACTTGTGAAAGATGAAGATCTTGTGGGGATTGAAGACAACAGGAGAC 565
                      ***************************************************  *******

consensus_9406#0      TGCTGACTGAATGGCTGTACGCTGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTA 780
consensus_9406#1      TGCTGACTGAATGGTTGTACACCGACGAGCTGGACAGTAAGGTGATAACAGTGTCAGGTA 625
                      ************** ***** * *************************************

consensus_9406#0      TGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACT 840
consensus_9406#1      TGGGCGGACTGGGGAAAACCACCCTGGTCACAAATGTGTATGAACGTGAAAAGATCAACT 685
                      ************************************************************

consensus_9406#0      TCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAGGA 900
consensus_9406#1      TCTCTGCTCATGCATGGATGGTTGTGTCTCAAACCTACACTGTGGATGCTCTATTAAAGA 745
                      ********************************************************* **

consensus_9406#0      AGCTGCTTAGGAAAGTTGGTTACACAGAACCACCACTGTCATGTAACATTGACAAAATGG 960
consensus_9406#1      AGCTGCTTTGGAAAAT-------------------------------------------- 761
                      ******** ***** *                                            

consensus_9406#0      ATGTGTATGATTTGAAAGAGGAAATAAAGCGAATGCTCAAAGTTAGAAAATGCTTGATCG 1020
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TACTTGATGATGTCTGGGACCAAGAAGCATACTTTCAAATACGTGATGCATTCCAGAATG 1080
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      ACCAAGGAAGTCGCGTAATAATCACAACACGGAAGAATCATGTGGCAGCTCTTGCTTCCT 1140
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      CAACATGTCACCTTGATCTCCAGCCATTGAGTGATATTCATGGCTTTGATCTATTCTGCA 1200
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      GAAGGGCATTTTATAACATTAAGGACCATGAGTGTCCCACGGAACTCGTGAAAGTTGCCA 1260
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      AATCTATAGTTGAGCGGTGTCAGGGCCTTCCACTAGCAATTGTGTCAATAGGCTGCCTCC 1320
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TGTCTTCAAGATCACGGTCACATTATGTTTGGAATCAAGCATACAATCAACTTAGAAGTG 1380
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      AGTTGTCAAAGAACAATCATGTCCGAGCAATTTTAAATATGAGCTACCATGACCTGTCAG 1440
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      GAGACCTAAGAAACTGCTTTTTGTACTGCAGCCTATTCCCGGAAGACTACCCGCTCTCCC 1500
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      GTGAGAGCCTTGTGCGTCTGTGGATTGCAGAAGGCTTTGTCCTGAGGAAAGAGAACAACA 1560
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      CACCAGAGGCAGTAGCTGAGGGAAATCTCATGGAATTGATATACAGGAATATGCTTCAAG 1620
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TTACAGAGTATGATGATCTCGGCAGGGTGAATACTTGTGGAATGCATGACATTATGCGAG 1680
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      ACCTGGCCCTTTCTGCTGCTAAAGAGGAGAAGTTTGGCTCTGNCAATGATTTTGGCACAA 1740
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TGGTAGAGATTGATAAGGATGTTCGTCGTCTGTCAACTTACCGATGGAAAGACAGTACTG 1800
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      CACCAATTCTCAAACTTCTACGTCTTCGAAACATAGTATCACTTGAAGCATTTTCATCTT 1860
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      CCATTGATATGTTGTCCTCAGTTTTGTCTCACTCAAGCTACCTTACTGTTCTCGAGCTTC 1920
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      AAGATTCAGAAATCACTCAAGTTCCACCATCTATAGGGAATTTGTTTAANCTACGTNACA 1980
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TTGGCTTACGGAGGACCAAGGTTAAGTCACTCCCAGACTCCATTGAAAAGTTGCTGAACC 2040
consensus_9406#1      ------------------------------------------------------------
                                                                                  

consensus_9406#0      TCCANACTCTGGA 2053
consensus_9406#1      -------------
                                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)