These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9421#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 829 fasta sequence [CATTGCAAATCTGTCACCGAAGCTGTCAATAGCTAGAGAGAGATAGAGAGAGAGAGAGAGAGCAGGGTGCGGCGCCGGAGCGGAGGAAGATGAGCGGGAGCAGCAACAGCAGCCTGGAGACGCGCACGTTCCTGGACGAGGTGCGCGGCCTGGAGAAGAACTGGATGGTCGACCTCGGCCACCCGCTCCTCAACCGCGTCGCCGAGAGCTTCGTCAAGGCCGCCGGCATCGGCGCAGTCCAGGCGGTCGCGCGGGAGTCTTACTTCATGGCCATGGAAGGGGAGGGTGGGG-GCACGGGAGCCG-TGTC-CGACTCCACCGGCGCCAGGAAGCGATCGTTCCCGGATCTCAACGGAGGGAACAGCAGCAAGTCAGCTGAGGCTATGGTGAAAAGCGTGAGCAAAGAGTCTCTCCAGTGGGGGCTCGCGGCCGGGTTGCACTCGGGGCTGACCTACGGCCTGACGGAGGCGCGCGGGACGCACGACTGGAAGAACAGCGTGGTGGCGGGCGCCCTCACCGGCGCGGCCGTCGCGCTCACCTCGGACCGCGCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTGTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTATGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTCGAAACAAAAAAAAA] [+] EMBL AK063714 [CATTGCAAATCTGTCACCGAAGCTGTCAATAGCTAGAGAGAGATAGAGAGAGAGAGAGAGAGCAGGGTGCGGCGCCGGAGCGGAGGAAGATGAGCGGGAGCAGCAACAGCAGCCTGGAGACGCGCACGTTCCTGGACGAGGTGCGCGGCCTGGAGAAGAACTGGATGGTCGACCTCGGCCACCCGCTCCTCAACCGCGTCGCCGAGAGCTTCGTCAAGGCCGCCGGCATCGGCGCAGTCCAGGCGGTCGCGCGGGAGTCTTACTTCATGGCCATGGAAGGGGAGGGTGGGG GCACGGGAGCCG TGTC CGACTCCACCGGCGCCAGGAAGCGATCGTTCCCGGATCTCAACGGAGGGAACAGCAGCAAGTCAGCTGAGGCTATGGTGAAAAGCGTGAGCAAAGAGTCTCTCCAGTGGGGGCTCGCGGCCGGGTTGCACTCGGGGCTGACCTACGGCCTGACGGAGGCGCGCGGGACGCACGACTGGAAGAACAGCGTGGTGGCGGGCGCCCTCACCGGCGCGGCCGTCGCGCTCACCTCGGACCGCGCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTGTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTATGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTCGAAcc ] [+] EMBL BI798366 [ CCCCCGACATCGGCACATTCCA GCGTTCGC CGGGATTCTAACTTCAT GCCATGAAAGGGGAGGTTGGGGCGCAC GGACCCGTTGTCACGACTCCACCGGC CCAGGAACCGATCGTTCCCGGATCTCAACGGAGGGAACAGCAGCAAGTCA CTGAGGCTATGGTGAAAAGCGTGAGCAAAGAGTCTCTCCAGTGGGGGCTCGCGGCCGGGTTGCACTCGGGGCTGACCTACGGCCTGACGGAGGCGCGCGGGACGCACGACTGGAAGAACAGCGTGGTGGCGGGCGCCCTCACCGGCGCGGCCGTCGCGCTCACCTCGGACCGCGCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTCTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTGTGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTCGAACCAAAAAAAAA] [+] EMBL AU058213 [ cnGGCGCCAGGAANCGATCGTTCCCGGATCTCAACGGAGGGAACAGCAGCAAGTCAGCTGAGGCTATGGTGAAAAGCGTGACAAAAGAGTCTCTCCAGTGGGGGCTCGCGGCCGGGTTGCACTCGGGGCTGACCTACGGCCTGACGGAGGCGCGCGGGACG ACGACTGGAAGAACAGCGTGGTGGCGGGCGCCCTCACCGGCGCGGCCGTCGCGCTCACCTCGGACCGCG ] [+] EMBL AU172942 [ AGCAAAGAGTCTCTCCAGTGGGGGCTCNCGGCCGGGTTGCACTCGGGGTTGACCTACGGCCTGACGGAGGCGCGCGGGACGCACGACTGGAAGAACAGCGTGGTGGCGGGCGCCCTCACCGGCGCGGCCGTCGCGCTCACCTCGGACCGCGCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTGTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTATGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTCGAAAaa ] [+] EMBL CF309258 [ CGCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTGTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTATGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTAAAAA ] [-] EMBL CF309259 [ GCGTCGCACGAGCGGGTGGTGCAGTGCGCCATCGCCGGCGCCGCGCTGTCCACGGCCGCCAACGTGCTCTCCGGCATATTGTGAGCCGCTCAGCCGGCAAATTAGCTGTCCGGAGTTTTAACTACCTGCATCTTAACTTCTCAAGTCTGCCATTGTTATGCTAGCTGTTGGAGCTTGGAAGTCTTCAGTGTAGCACTCGTTGTAATTGGCATCTTGTATGCTTGATTTCCTGTGCTATCACGGGGTACAAATAAATCGAAAAATCATGTAAAAAa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||