These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9427#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1091 fasta sequence [CTCCTCCTAAACCCCCGAAAACCCTAACCTTTCGTCCGCGCCGCCGCACGGGTCGCCATGGCTCTCTTCGCCGCCGCTCGCCGCGCCGCCACCTCCACCCTCCCCCTCCTCCGCGCCTCCGCCTCCGCCGCGGGGACCACCCGCGGCGCCGCCGCCCTGCTCCGCCCCCTGGCCGCCGCCGCCGCGGCGCGGCCGCAGCCTCGCTCGATGCCCTTCTCGTCGGCCCCCTCCACGAGGCCCAGCTCAGATGGCGAGCTCCTCCGCATCATCGACGCCGAGATCAAGTTCGCCGAGGAGAGCGACGACCACGACCGGGTTGAGGAGATTCCTGACAACTTCCCCTTTAAAATTAGTGATGAAAAGGGCTTTAATTCAATTACTCTCACAAGAACTTACCAGGGTGAGAATATTGAGGTTCTAGTTTCCATGCCCAGTCTTGTGACTGGCGATGAACCTGA-CCGTGAGAATGAGGCTGATGAGGACAGAAACGAGGATGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCAT-CAGAGAGTGGGGAAGATGAAATGATCACGTATGAGGGCCCTGATTTCAATGACC-TTGATGAAAACCTGC-AAAGGGCATTCC-ACAAGTACCTGGAGATGCGCGGG-ATTACG-CCCATGGCC-ACAAACTTCCTACAC-GAGTACATGATCAACAAGGACAGCCGAGAATACCTCATCTGGCTGAGGCGGCTGAAGGATTTTGTTAGGAATTAATGATTAACACAATCATTTCCTTGCCATAAGATTAGTTTTGAGGGCTGTGAACCGCTCCTTTCTATAAGTATACATGGACCATGAATTGTGAATGTATGCTTATTTAGGCGTTTAAGGTCGTTGTCGTGACCAAGTTTTTTGGCAGTATCATAATGGCTCATGAGTCATGAACCTGGATGTTGGAACCAATGGAAATGCTTCAGTTAGGATATTCTGTGATTTTCATCTACACTGAAAAA] [+] EMBL AK108438 [CTCCTCCTAAACCCCCGAAAACCCTAACCTTTCGTCCGCGCCGCCGCACGGGTCGCCATGGCTCTCTTCGCCGCCGCTCGCCGCGCCGCCACCTCCACCCTCCCCCTCCTCCGCGCCTCCGCCTCCGCCGCGGGGACCACCCGCGGCGCCGCCGCCCTGCTCCGCCCCCTGGCCGCCGCCGCCGCGGCGCGGCCGCAGCCTCGCTCGATGCCCTTCTCGTCGGCCCCCTCCACGAGGCCCAGCTCAGATGGCGAGCTCCTCCGCATCATCGACGCCGAGATCAAGTTCGCCGAGGAGAGCGACGACCACGACCGGGTTGAGGAGATTCCTGACAACTTCCCCTTTAAAATTAGTGATGAAAAGGGCTTTAATTCAATTACTCTCACAAGAACTTACCAGGGTGAGAATATTGAGGTTCTAGTTTCCATGCCCAGTCTTGTGACTGGCGATGAACCTGA CCGTGAGAATGAGGCTGATGAGGACAGAAACGAGGATGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCAT CAGAGAGTGGGGAAGATGAAATGATCACGTATGAGGGCCCTGATTTCAATGACC TTGATGAAGACCTGC AAAGGGCATTCC ACAAGTACCTGGAGATGCGCGGG ATTACG CCCATGGCC ACAAACTTCCTACAC GAGTACATGATCAACAAGGACAGCCGAGAATACCTCATCTGGCTGAGGCGGCTGAAGGATTTTGTTAGGAATTAATGATTAACACAATCATTTCCTTGCCATAAGATTAGTTTTGAGGGCTGTGAACCGCTCCTTTCTATAAGTATACATGGACCATGAATTGTGAATGTATGCTTATTTAGGCGTTTAAGGTCGTTGTCGTGACCAAGTTTTTTGGCAGTATCATAATGGCTCATGAGTCATGAACCTGGATGTTGGAACCAATGGAAATGCTTCAGT ] [+] EMBL AU063034 [ CGGGTTGAGGAGATTCCTGACAACTTCCCCTTTAAAATTAGTGATGAAAAGGGCTTTAATTCAATTACTCTCACAAGAACTTACCAGGGTGAGAATATTGAGGTTCTAGTTTCCATGCCCAGTCTTGTGACTGGCGATGAACCTGA CCGTGAGAATGAGGCTGATGAGGACAGAAACGAGGATGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCAT CAGAGAGTNGGGAAGATGAAATGATCACGTATGAGGGGCCTGATTTCAATGACC TTGATGAAAACCTNC AAAGGGCATTCC ACAAGTACCTGGNGATGCGCGGG ATTNGG CCATTGGCC A ] [+] EMBL C27934 [ ACAACTTCCCCTTTAAAATTAGTGATGAAAAGGGCTTTAATTCAATTACTCTCACAAGAACTTACCAGGGTGAGAATATTGAGGTTCTAGTTTCCATGCCCAGTCTTGTGACTGGCGATGAACCTGA CCGTGAGAATGAGGCTGATGAGGACAGAAACGAGGATGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCAT CAGAGAGTGGGGAAGATGAAATGATCACGTATGAGGGCCCTGATTTCAATGACC TT ] [+] EMBL AU108164 [ AGAACTTACCAGGNTGAGAATATTGA GTTCTAGTTTCCATGCCCAGTCTTGTGACTGGCGATGAACCTGACCCGTGAGAATGAGGCTGATGAGGACAGAAACGAGGATGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCATCCAGAGAGTGGGGAAGATGAAATGATCACGTATGAGGGCCCTGATTTCAATGACC TTGATGAAAACCTGC AAAGGGCATTCC ACAAGTACCTGGAGATGCGCGGG ATTACG CCCATGGCC ACAAACTTCCTACAC GAGTACATGATCAACAAGGACAGCCGAGAATACCTCATCTGGCTGAGGCGGCTGAAGGATTTTGTTAGGAATTAATGATTAACACAATCATTTCCTTGCCATAAGATTAGTTTTGAGGGCTGTGAACCGCTCCTTTCTATAAGTATACATGGACCATGAATTGTGAATGTATGCTTATTTAGGCGTTTAAGGTCGTTGTCGTGACCAAGTTTTTTGGCAGTATCATAATGGCTCATGAGTCATGAACCTGGATGTTGGAACCAATGGAAATGCTTCAGTTAGGATATTCTGTGAaaaa ] [+] EMBL CA767123 [ gacaagGGGTGATCAGGAGGAAGAAACTCAGAAGGCCCCAAAATCTAGCATTCCTCTAACTGTCACCATCTCGAAGGGAGAAGAGGGACCAAGCCTTGAATTCATCTGCACTGCCTATCCTGATGAGATCCTCATCGATGCCTTGTCTGTGATGCCAT CAGAGAGTGGGGAAGATGAAATGATCACGTATGAGGGTCCTGATTTCAATGACC TTGATGAAAACCTGC AAAGGGCATTCC ACAAGTACCTGGAGATGCGCGGG ATTACG CCCATGGCC ACAAACTTCCTACAC GAGTACATGATCAACAAGGACAGCCGAGAATACCTCATCTGGCTGAGGCGGCTGAAGGATTTTGTTAGGAATTAATGATTAACACAATCATTTCCTTGCCATAAGATTAGTTTTGAGGGCTGTGAACCGCTCCTTTCTATAAGTATACATGGACCATGAATTGTGAATGTATGCTTATTTAGGCGTTTAAGGTCGTTATCGTGACCAAGTTTTTTGGCAGTATCATAATGGCTCATGAGTCATGAACCTGGATGTTGGAACCAATGGAAATGCTTCAGTTAGGATATTCTGTGATTTTCA ] [+] EMBL AU092624 [ cCCCTGGATTCAATGACCNTTGATGAAAACNTGCAAAAGGCCATTCCNACAAGTACCTGGAGATNCGCGGGAATTACGCCCCATGGCCNAC AACTTCCTACACGGAGTACATGATCAACAAGGACAGCCGAGAATACCTCATCTGGCTGAGGCGGCTGAAGGATTTTGTTAGGAATTAATGATTAACACAATCATTTCCTTGCCATAAGATTAGTTTTGAGGGCTGTGAACCGCTCCTTTCTATAAGTATACATGGACCATGAATTGTGAATGTATGCTTATTTAGGCGTTTAAGGTCGTTGTCGTGACCAAGTTTTTTGGCAGTATCATAATGGCTCATGAGTCATGAACCTGGATGTTGGAACCAATGGAAATGCTTCAGTTAGGATATTCTGTGATTTTCATCTACACTGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||