These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9432#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 998 fasta sequence [ATCCAAGACCGATCAGATACCCCGATCCTCCCGAACCCCAAATNAGATCTCACACGCTTTGGAGCGAACAGTCCAAGG-AGCAGAGCAGCCTTCCTCTTCCTCTCTTCTCCGATCGGAAGCAGGCGCGGCGGCGGTAGCGGAAGCGGCAGTCGCCGTAGGAGCGGATCGCGATGGGAGCGGAGTGCAAGTACGAGGTGGCGCAGGTGGCGTACGTCAAGCTCGCGCTGCACGCCCTCAAGCACCCCGCCGCCGCCGTCAACGGCCTCCTCGTCGGCCGCCTCCTCGACGGGGCCGCCTCCCCCGCCGCCGTCGTCTCCATCGCCGACGCCGTGCCGCTCTCCCACCACCCGCACCACCTCCCGCTGCTCCCCACCCTCGAGCTCGCGCTCACGCTCGTCGAGGACCACTTCGCCGCGCAGGGCCTCGCGGTCGTCGGCTACTACCACGCCAACGCGCGCCGCGACGACGCCGACCTCCCGCCCGTCGCCAAGCGCGTCGGGGACCACGTCTTCCGCAAC-TTCCCCCGCGCCGCCGTACTCCTGC-TTGATAACAAGAAGCTGGAGGAGGCAGTCAAGGGGAAGAGTCGCGAGCCAGTCGTTCAGCTATACACTAGGGATTCATCAAAAAGCTGGCGTCAGGCTGGATCAGATGGAAGTAGTCAGCTGACTTTAAAAGAACCATCAACCAATATGGTCTTAGCCGAT-CATGTTACAACGAAGAAATGGCAGCAAGTT-GTTGATTTCGATGACCACCTCGATGATATTAGCAAAGATTGGTTGAACCCAGGGCTACTTGCTTGAAATAATTATGTGCTTTGATATTTTTATACTTGTTGGTACCAATATGTTGAGGCTCGTCTCACCAGATTATTGCGGTTCTCTCTATAGCTAGACGAGTTATTTGACAGGGTTTGTACTTAAATATGGACAAGTAATTTTTGTAACAAACTGTAGCATGTGAAAATGCTTAGATCTGCATTAAGATTACTGGCGTTCATG] [+] EMBL AU063237 [ATCCAAGACCGATCAGATACCCCGATCCTCCCGAACCCCAAATNAGATCTCACACGCTTTGGAGCGAACAGTCCAAGG AGCAGAGCAGCCTTCCTCTTCCTCTCTTCTCCGATCGGAAGCAGGNGNGGNGGCGGTAGCGGAAGGGNCAGTCGCCGTA GAGCGGATCGCGATGGGAGCGGAGTGCAAGTACGAGGTGGCGCAGGTGGNGTACGTNAAGNTCGTGCTGCACGCCCTCAAGCACCCCGCCGCCGCCGTCAACGGCCTCCTCGTCGGCCGCCTCCTC ] [+] EMBL AK061854 [ GGAGCGAACAGTCCAAGG AGCAGAGCAGCCTTCCTCTTCCTCTCTTCTCCGATCGGAAGCAGGCGCGGCGGCGGTAGCGGAAGCGGCAGTCGCCGTAGGAGCGGATCGCGATGGGAGCGGAGTGCAAGTACGAGGTGGCGCAGGTGGCGTACGTCAAGCTCGCGCTGCACGCCCTCAAGCACCCCGCCGCCGCCGTCAACGGCCTCCTCGTCGGCCGCCTCCTCGACGGGGCCGCCTCCCCCGCCGCCGTCGTCTCCATCGCCGACGCCGTGCCGCTCTCCCACCACCCGCACCACCTCCCGCTGCTCCCCACCCTCGAGCTCGCGCTCACGCTCGTCGAGGACCACTTCGCCGCGCAGGGCCTCGCGGTCGTCGGCTACTACCACGCCAACGCGCGCCGCGACGACGCCGACCTCCCGCCCGTCGCCAAGCGCGTCGGGGACCACGTCTTCCGCAAC TTCCCCCGCGCCGCCGTACTCCTGC TTGATAACAAGAAGCTGGAGGAGGCAGTCAAGGGGAAGAGTCGCGAGCCAGTCGTTCAGCTATACACTAGGGATTCATCAAAAAGCTGGCGTCAGGCCGGATCAGATGGAAGTAGTCAGCTGACTTTAAAAGAACCATCAACCAATATGGTCTTAGCCGAT CATGTTACAACGAAGAAATGGCAGCAAGTT GTTGATTTCGATGACCACCTCGATGATATTAGCAAAGATTGGTTGAACCCAGGGCTACTTGCTTGAAATAATTATGTGCTTTGATATTTTTATACTTGTTGGTACCAATATGTTGAGGCTCGTCTCACCAGATTATTGCGGTTCTCTCTATAGCTAGACGAGTTATTTGACAGGGTTTGTACTTAAATATGGACAAGTAATTTTTGTAACAAACTGTAGCATGTGAAAATGCTTAGATCTGCATTAAGATTACTGG ] [+] EMBL CA756113 [ AGT CAAGGAAGAAGAGCACCCTTCCTCTTCCTCTCTTCTCCGATCGGAAGCAGGCGCGGCGGCGGTAGCGGAAGCGGCAGTCGCCGTAGGAGCGGATCGCGATGGGAGCGGAGTGCAAGTACGAGGTGGCGCAGGTGGCGTACGTCAAGCTCGCGCTGCACGCCCTCAAGCACCCCGCCGCCGCCGTCAACGGCCTCCTCGTCGGCCGCCTCCTCGACGGGGCCGCCTCCCCCGCCGCCGTCGTCTCCATCGCCGACGCCGTGCCGCTCTCCCACCACCCGCACCACCTCCCGCTGCTCCCCACCCTCGAGCTCGCGCTCACGCTCGTCGAGGACCACTTCGCCGCGCAGGGCCTCGCGGTCGTCGGCTACTACCACGCCNACGCGCGCCGCGACGACGCCGACCTCCCGCCCGTCGCCAAGCGCGTCGGGGAACACGTCTTCCGCAACTTTCCCCCGCG CG CGTACTCCTGCTTTGAT ACAAGAAGCTGGAGGAGGCAGTCAAGGGGAAGAGTCGCGAGCCAGTCGTTCAGCTATACACTAGGGATTCATCAAAAAGCTGGCGTCAGGCTGAATCAGATGGAAGTAGTC ] [+] EMBL AK099002 [ G AGCAGAGCAGCCTTCCTCTTCCTCTCTTCTCCGATCGGAAGCAGGCGCGGCGGCGGTAGCGGAAGCGGCAGTCGCCGTAGGAGCGGATCGCGATGGGAGCGGAGTGCAAGTACGAGGTGGCGCAGGTGGCGTACGTCAAGCTCGCGCTGCACGCCCTCAAGCACCCCGCCGCCGCCGTCAACGGCCTCCTCGTCGGCCGCCTCCTCGACGGGGCCGCCTCCCCCGCCGCCGTCGTCTCCATCGCCGACGCCGTGCCGCTCTCCCACCACCCGCACCACCTCCCGCTGCTCCCCACCCTCGAGCTCGCGCTCACGCTCGTCGAGGACCACTTCGCCGCGCAGGGCCTCGCGGTCGTCGGCTACTACCACGCCAACGCGCGCCGCGACGACGCCGACCTCCCGCCCGTCGCCAAGCGCGTCGGGGACCACGTCTTCCGCAAC TTCCCCCGCGCCGCCGTACTCCTGC TTGATAACAAGAAGCTGGAGGAGGCAGTCAAGGGGAAGAGTCGCGAGCCAGTCGTTCAGCTATACACTAGGGATTCATCAAAAAGCTGGCGTCAGGCTGGATCAGATGGAAGTAGTCAGCTGACTTTAAAAGAACCATCAACCAATATGGTCTTAGCCGAT CATGTTACAACGAAGAAATGGCAGCAAGTT GTTGATTTCGATGACCACCTCGATGATATTAGCAAAGATTGGTTGAACCCAGGGCTACTTGCTTGAAATAATTATGTGCTTTGATATTTTTATACTTGTTGGTACCAATATGTTGAGGCTCGTCTCACCAGATTATTGCGGTTCTCTCTATAGCTAGACGAGTTATTTGACAGGGTTTGTACTTAAATATGGACAAGTAATTTTTGTAACAAACTGTAGCATGTGAAAATGCTTAGATCTGCATTAAGATTACTGGCGTTCATG] [+] EMBL AU089728 [ TATGGTCTTAGCCGATCCATGTTACAACGAAGAAATGGCAGCAAGTTNGTTGATTTCGATGACCACCTCGATGACATTAGCAAAGATTGGTTGAACCCAGGGCTACTTGCTTGAAATAATTATGTGCTTTGATATTTTTATACTTGTTGGTACCAATATGTTGAGGCTCGTCTCACCAGATTATTGCGGTTCTCTCTATAGCTAGACGAGTTATTTGACAGGGTTTGTACTTAAATATGGACAAGTAATTTTTGTAACAAACTGTAGCATGTGAAAATGCTTAGATCTGCATTAAGATTAaaaaa ] [+] EMBL OSS12020A [ ATGGTCTTAGCCGAT CATGTTACAACGAAGAAATGGCAGCAAGTT GTTGATTTCGATGACCACCTCGATGACATTAGCAAAGATTGGTTGAACCCAGGGCTACTTGCTTGAAATAATTATGTGCTTTGATATTTTTATACTTGTTGGTACCAATATGTTGAGGCTCGTCTCACCAGATTATTGCGGTTCTCTCTATAGCTAGACGAGTTATTTGACAGGGTTTGTACTTAAATATGGACAAGTAATTTTTGTAACAAACTGTAGCATGTGAAAATGCTTAGATCTG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||