cluster # 9440

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Oryza sativa
cluster # 9440 cluster # 9440 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9440#0 length = 1312 sequences # 6
consensusID : consensus_9440#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1312
fasta sequence
                              [CCAATCAGAAATCACAAAGCACAACAAAACCTCATTGCATCTAGCTAGCTTTTCTGTCTCCTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTTCCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGTCGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGCACTGGCAGGAGAACCCGGTGCTGTTCCTGACGTCGCCGTCGGGCAAGTACACGGCGTACTTCCTGCGCAGCCAGACCGCGCCGGGCGCCGGCGGCCTCGGCGCCGACTTCTGCTACGTGGAGGTGCTCGACACCTCGGATCCCGGCGCGGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCCTGGCGGTGAGCACCGTGAACACGTGCTCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCGGTGTGGCACACCCACGACACGCAGTCCGACAGCCAGAACTTCCTCGAGACGCTGGAGCTGGTGGACGAGGGCGACATGCGCATCCTCGACAAGGGCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAGCACTGCGGGATGCCAGGCTCCCCCGGTCTCGCCTCGGCGTTCCCGCCGTTCGCCCAGCCGATCGGCCACGGCAGCAGCGACCTGCCGTTCGGGTTCGGGAACGGTGACCACGTCGCTGGCAACGGCATCGGCGGCGGCGCCGTGGCGCAGCCGGAGCTCCCCGTGGCGCCAGTGCCGCAGCCGGAGCTTCCGTTGGCGCCGGTGCCGCAGGAGGCTGATCTCGGTGGCGCCGCCGGGGTGGAGCCGCAGGGACAGGGCGTGGGGCAGACGTCGTTC-GGATTCGGCGCCC-AGCCGCTGGTGGACAACAGCCCGTACGACAGCGGCGCATGGAAGCAGGTGGGCGGATGCAGCCTCACCGCCATCGGAGTTGGCTTCATTCTCAACGTCGCCATTGCCATGGGCTTGGGCCACTGAAATACTGAATTCGGAGAATTCGAGGGCATATATGGTAGCTTCGGTGCTTGGATGATCACGTACAGTTACGTAGTGGTTTCTTTGAAATTAATGGTGATTTAACTCTGGCACAAGAAGCCAGCGGATGTGCGTGCTGTGTGTACTGGTGTGTTGCAGGTGGTGCTTTTTCTGGGTGTTTGGTTGTATTAGTATCGTGTTTGGAAATTGCAAATTGTAATTGTTTAAACCTTTTNTAATGGTTTTGTTTCATTTTGAAAAAA]

[+] EMBL AK064707             [CCAATCAGAAATCACAAAGCACAACAAAACCTCATTGCATCTAGCTAGCTTTTCTGTCTCCTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTTCCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGTCGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGCACTGGCAGGAGAACCCGGTGCTGTTCCTGACGTCGCCGTCGGGCAAGTACACGGCGTACTTCCTGCGCAGCCAGACCGCGCCGGGCGCCGGCGGCCTCGGCGCCGACTTCTGCTACGTGGAGGTGCTCGACACCTCGGATCCCGGCGCGGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCCTGGCGGTGAGCACCGTGAACACGTGCTCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGTTCGACGGGAGCAACTCGGTGTGGCACACCCACGACACGCAGTCCGACAGCCAGAACTTCCTCGAGACGCTGGAGCTGGTGGACGAGGGCGACATGCGCATCCTCGACAAGGGCGGCGAGCTGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAGCACTGCGGGATGCCAGGCTCCCCCGGTCTCGCCTCGGCGTTCCCGCCGTTCGCCCAGCCGATCGGCCACGGCAGCAGCGACCTGCCGTTCGGGTTCGGGAACGGTGACCACGTCGCTGGCAACGGCATCGGCGGCGGCGCCGTGGCGCAGCCGGAGCTCCCCGTGGCGCCAGTGCCGCAGCCGGAGCTTCCGTTGGCGCCGGTGCCGCAGGAGGCTGATCTCGGTGGCGCCGCCGGGGTGGAGCCGCAGGGACAGGGCGTGGGGCAGACGTCGTTC GGATTCGGCGCCC AGCCGCTGGTGGACAACAGCCCGTACGACAGCGGCGCATGGAAGCAGGTGGGCGGATGCAGCCTCACCGCCATCGGAGTTGGCTTCATTCTCAACGTCGCCATTGCCATGGGCTTGGGCCACTGAAATACTGAATTCGGAGAATTCGAGGGCATATATGGTAGCTTCGGTGCTTGGATGATCACGTACAGTTACGTAGTGGTTTCTTTGAAATTAATGGTGATTTAACTCTGGCACAAGAAGCCAGCGGATGTGCGTGCTGTGTGTACTGGTGTGTTGCAGGTGGTGCTTTTTCTGGGTGTTTGGTTGTATTAGTATCGTGTT                                                              ]
[+] EMBL AU065410             [            CACAAAGCACAACAAAACCTCATTGCATCTAGCTAGCTTTTCTGTCTCCTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTTCCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGTCGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGCACTGGCAGGAGAACCCGGTGCTGTTCCTGACGTNGCCGTCNGGCAAGTAAACGAGNTAGTTGCTTAGTAGCacn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AU065355             [            CACAAAGCACAACAAAACCTCATTGCATCTAGCTAGCTTTTCTGTCTCCTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTTCCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGTCGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGCACTGGCAGGAGAACCCGTTTCTGTTCCTGAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA758596             [               AAAGCACAACAAAACCTCATTGCACCTAGCTAGCTTTTCTGTCTCCTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTTCCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGTCGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGCACTGGCAGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AU173523             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                nCCGCAGGGACAGGGCGTGGGGCAGACGTCGTTC GGATTCGGCGCCC ANCCGCTGGTGGACAACAGCCCGTACGACAACGGCGCATGGAAGCAGGTGGGCGGATGCAGCCTCACCGCCATCGGAGTTGGCTTCATTNTCAACGTCGCCATTGCCATGGGCTTGGGCCNCTGAAATACTGAATTCGGAGAATTCGAGGGCATATATGGTAGCTTCGGTGCTTGGATGATCACGTACAGTTACGTAGTGGTTTCTTTGAAATTAATGGTGATTTAACTNTGGCNCAANAAGCCAGCGGATGTGCGTGCTGTGTGTACTGGTGTGTTGCAGGTGGTGCTTTTTCTGGGTGTTTGGTTGTATTAGTATCGTGTTTGGAAATTGCAAATTGTAATTGTTTAAACCTTTTNTAATGGTTTTGTTTCATTTTGAAAAAA]
[+] EMBL AU173508             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    aAGGGNAAGGGCGTGGGCCANACGTCGTTCGGGATTCGGCGCCCAACCCGCTGGTGGACAACAGCCCGTACGACACGGGCGCATGGAAGCAGGTGGGCGGATNCAGCCTCNCCGCCATCGGAGTTGGCTTCATTTTCAACGTCGCCATTGCCATGGGCTTGGGCCACTGAAATACTGAATTCGGAGAATTNGAGGGCATATATGGTAGCTTCGGTGCTTGGATGATCACGTACAGTTACGTAGTGGTTTCTTTGAAATTAATGGTGATTTAACTCTGGCACAAGAANCCANCGGATGTGCGTGCTGTGTGTACTGGTGTGTTGCAGGTGGTGCTTTTTCTGGGTGTTTGGTTGTATTAGTATCGTGTTTGGAAATTGCAAATTGTAATTGTTTAAACCTTTTCTAATGGTTTTGTTTCATTTTGAAAAAA]




>consensus_9440#0
CCAATCAGAAATCACAAAGCACAACAAAACCTCATTGCATCTAGCTAGCTTTTCTGTCTC
CTGAATTTCTGATCAGCCAGCGAAAACCCAACGCAAGCTTGGTCACCATGGGGTTTGCTT
CCTGCGTCGCCGTATGCCTCGCGTTCGCCGTTCTCCTCCCTTGGCACGCCACGGCGACGT
CGCCGACGGGCACGATACAGCGGGAGACGAAGCAGCAGATCCTGGCCAGCATCCCGCCGC
ACTGGCAGGAGAACCCGGTGCTGTTCCTGACGTCGCCGTCGGGCAAGTACACGGCGTACT
TCCTGCGCAGCCAGACCGCGCCGGGCGCCGGCGGCCTCGGCGCCGACTTCTGCTACGTGG
AGGTGCTCGACACCTCGGATCCCGGCGCGGAGGGGCGGAGCGTGTGGGAGTCGGAGTGCC
TGGCGGTGAGCACCGTGAACACGTGCTCGCTCGTGTTCTCGTGGAAAGGGCTGGAGGTGT
TCGACGGGAGCAACTCGGTGTGGCACACCCACGACACGCAGTCCGACAGCCAGAACTTCC
TCGAGACGCTGGAGCTGGTGGACGAGGGCGACATGCGCATCCTCGACAAGGGCGGCGAGC
TGGCGTGGAAGGCCAGCGACGAGCCGCGCGCCGCGCAGCACTGCGGGATGCCAGGCTCCC
CCGGTCTCGCCTCGGCGTTCCCGCCGTTCGCCCAGCCGATCGGCCACGGCAGCAGCGACC
TGCCGTTCGGGTTCGGGAACGGTGACCACGTCGCTGGCAACGGCATCGGCGGCGGCGCCG
TGGCGCAGCCGGAGCTCCCCGTGGCGCCAGTGCCGCAGCCGGAGCTTCCGTTGGCGCCGG
TGCCGCAGGAGGCTGATCTCGGTGGCGCCGCCGGGGTGGAGCCGCAGGGACAGGGCGTGG
GGCAGACGTCGTTCGGATTCGGCGCCCAGCCGCTGGTGGACAACAGCCCGTACGACAGCG
GCGCATGGAAGCAGGTGGGCGGATGCAGCCTCACCGCCATCGGAGTTGGCTTCATTCTCA
ACGTCGCCATTGCCATGGGCTTGGGCCACTGAAATACTGAATTCGGAGAATTCGAGGGCA
TATATGGTAGCTTCGGTGCTTGGATGATCACGTACAGTTACGTAGTGGTTTCTTTGAAAT
TAATGGTGATTTAACTCTGGCACAAGAAGCCAGCGGATGTGCGTGCTGTGTGTACTGGTG
TGTTGCAGGTGGTGCTTTTTCTGGGTGTTTGGTTGTATTAGTATCGTGTTTGGAAATTGC
AAATTGTAATTGTTTAAACCTTTTNTAATGGTTTTGTTTCATTTTGAAAAAA
clustalw multiple alignements is not computed in this case