| 
     These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs : 
 consensusID : consensus_9454#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 5 consensus length = 1261 fasta sequence 
                              [GGCCATGTCCCAAGTGGATAGACGGTCCTGATCTTCTGCCGTGCTGTTCTGCTGGTGTTGCCGCATAACCCACGGCGGCGGCGCGTAGGCAAAGCCGGGAGGAAGGATTAGGGTTTAGGCGGCGGCCATGGCAGCTGAGGAGCAGACTCCGCGAACCAAACCCAGCACCGGGAACAGCAAGAAGAGGAAGAAGCCCAGGAAGGACAAGTGGGGCCAGCCTATCATCGACGCCGGCGATCGCCCGGCGGTTGAGCCGGAGC-CTGAGCCAGAGCCGGAGCCTGTCCCAGCGCCCGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGGGATCTATGAAACCGGCAAGGTGGTGGCCAGCGGCCTGCCGTACACCACCACCGAGGCGGAGATCCGGGAGCTCTTCGAGCGGTTCGGTCCCCTCCGGTCGCTCCAGCTCTCTCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCGTTCGTCTCCTTCGAGTCAAACGAGGTGGTAATGAAGTCTCTTGAGCTTGACGGATTCAAAATTGGCAACAGGTTTATGAGAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAAAAAAGAAACAGAAATCTCTGTCAAATATAACTATCTGGTCATAGCAGTGGCGACTGATGTTGGAATGTTGTCTCATTGAGTTTGATGTCGAGGGCCTAAAGTTAGTAATTGTTGAGCTCAGAACTAAACCTAATCTTTTAGAGTATTATATCCCATCTGAATAGACGTTCTTTAACTAGAAAAAAAA]
[+] EMBL AK066740             [GGCCATGTCCCAAGTGGATAGACGGTCCTGATCTTCTGCCGTGCTGTTCTGCTGGTGTTGCCGCATAACCCACGGCGGCGGCGCGTAGGCAAAGCCGGGAGGAAGGATTAGGGTTTAGGCGGCGGCCATGGCAGCTGAGGAGCAGACTCCGCGAACCAAACCCAGCACCGGGAACAGCAAGAAGAGGAAGAAGCCCAGGAAGGACAAGTGGGGCCAGCCTATCATCGACGCCGGCGATCGCCCGGCGGTTGAGCCGGAGC CTGAGCCAGAGCCGGAGCCTGTCCCAGCGCCCGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGGGATCTATGAAACCGGCAAGGTGGTGGCCAGCGGCCTGCCGTACACCACCACCGAGGCGGAGATCCGGGAGCTCTTCGAGCGGTTCGGTCCCCTCCGGTCGCTCCAGCTCTCTCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCGTTCGTCTCCTTCGAGTCAAACGAGGTGGTAATGAAGTCTCTTGAGCTTGACGGATTCAAAATTGGCAACAGGTTTATGAGAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATA                                                                                                                                                                                            ]
[+] EMBL AU068512             [                                                                                        GCAAAGCNGGGAGGAAGGATTAGGGTTTAGGCGGCGGCCATGGCAGCTGAGGAGCAGACTCCGCGAACCAAACCCAGCACCGGGAACAGCAAGAAGAGGAAGAAGCNCAGGAAGGACAAGTNGGGCCANCNTATCATCGACGCCGNCGATCGCCCGNCGGTTGAGCCGGAGCNTTTAGCCANAGCCGGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CB677347             [                                                                                                               GGTTTAGGCGGCGGCCATGGCAGCTGAGGAGCAGACTCCGCGAACCAAACCCAGCACCGGGAACAGCAAGAAGAGGAAGAAGCCCAGGAAGGACAAGTGGGGCCAGCCTATCATCGACGCCGGCGATCGCCCGGCGGTTGAGCCGGAGC CTGAGCCAGAGCCGGAGCCTGTCCCAGCGCCCGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGGGATCTATGAAACCGGCAAGGTGGTGGCCAGCGGCCTGCCGTACACCACCACCGAGGCGGAGATCCGGGAGCTCTTCGAGCGGTTCGGTCCCCTCCGGTCGCTCCAGCTCTCTCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCGTTCGTCTCCTTCGAGTCAAACGAGGTGGTAATGAAGTCTCTTGAGCTTGACGGATTCAAAATTGGCAACAGGTTTATGAGAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTANACTTTGAGCATGA                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB677348             [                                                                                                                                                                                                                                                        TTGAGCCGGAGC CTGAGCCAGAGCCGGAGCCTGTCCCAGCGCCCGCAGCGGCGGCGGCGGCGGAGGAGGAGGAGGAGGCGGGGATCTATGAAACCGGCAAGGTGGTGGCCAGCGGCCTGCCGTACACCACCACCGAGGCGGAGATCCGGGAGCTCTTCGAGCGGTTCGGTCCCCTCCGGTCGCTCCAGCTCTCTCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCGTTCGTCTCCTTCGAGTCAAACGAGGTGGTAATGAAGTCTCTTGAGCTTGACGGATTCAAAATTGGCAACAGGTTTATGAGAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCACCGTGAGGCAAATACTTGGTGCTACTTAATATCGACCTTATCAAAAAGAAA                                                                                                                                                                                   ]
[+] EMBL AU181482             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCNCCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAAACACTTCTCAGAAATCTCTGTCAAATATAACTATCTGGTCATAGCAGTGGCGACTGATGTTGGAATGTTGTCTCATTGAGTTTGATGTCGAGGGCCTAAAGTTAGTAATTGTTGAGCTCAGAACTAAACCTAATCTTTTAGAGTATTATATCCCATCTGAATAGACGTTCTTTAACTAGAAAAAAAA]
consensusID : consensus_9454#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 976 fasta sequence 
                              [CCTGAAGTTTGATACCTGGGGGGGGAAAACGGGAGAATGGTTTGCGCCTTCAATAAGAAACCCACACAACAGCCCGACACAAAAAGAAACCCGAGGCAAGGGGCACCTTATAACCGGATTCCCGGGTAACGAGCTAACAAACGGACTGTCCAGGCCTTTTGCGCGCGGGGAGAAGAGAAAAGCGGGATTAATAACGGCAAGTGGGGGCACGGCCTCCGACACCCCCACGAGGGAAGACCGGAGCTCTTCGAGCGGTCGGGCCCCTCGGTGGTCCAGGTTTTTGCTTTCCGGACTCGGCAAATTCCGCGGCCTCGGGGTTGTCTCCTTCGAGTCAAACAAGGTGGCAATGAAGTCTCTTGAGCTTGACGGATTCCAAATTGGCAACAGGTTTATGAAAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAAACACTTCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGAGACTAGTTCTCCCTCTCTCTCT]
[-] EMBL BE040712             [CCTGAAGTTTGATACCTGGGGGGGGAAAACGGGAGAATGGTTTGCGCCTTCAATAAGAAACCCACACAACAGCCCGACACAAAAAGAAACCCGAGGCAAGGGGCACCTTATAACCGGATTCCCGGGTAACGAGCTAACAAACGGACTGTCCAGGCCTTTTGCGCGCGGGGAGAAGAGAAAAGCGGGATTAATAACGGCAAGTGGGGGCACGGCCTCCGACACCCCCACGAGGGAAGACCGGAGCTCTTCGAGCGGTCGGGCCCCTCGGTGGTCCAGGTTTTTGCTTTCCGGACTCGGCAAATTCCGCGGCCTCGGGGTTGTCTCCTTCGAGTCAAACAAGGTGGCAATGAAGTCTCTTGAGCTTGACGGATTCCAAATTGGCAACAGGTTTATGAAAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAAGGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTGGCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGATTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATGTTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGCGCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATAGTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACGGTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTAGAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAAACACTTCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGAGACTAGTTCTCCCTCTCTCTCT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9454#0      GGCCATGTCCCAAGTGGATAGACGGTCCTGATCTTCTGCCGTGCTGTTCTGCTGGTGTTG 60
consensus_9454#1      ------------------------------------------------------------
                                                                                  
consensus_9454#0      CCGCATAACCCACGGCGGCGGCGCGTAGGCAAAGCCGGGAGGAAGGATTAGGGTTTAGGC 120
consensus_9454#1      ---------------------------------------------CCTGAAGTTTGATAC 15
                                                                     * * * ** *  *
consensus_9454#0      GGCGGCCATGGCAGCTGAGGAGCAGACTCCGCGAACCAAACCCAGCACCGGGAACAGCAA 180
consensus_9454#1      CTGGGGGGGGAAAACGGGAGAATGGTTTGCGCCTTCAATAAGAAACCCACACAACAGCCC 75
                         **    *  * * *  **   *  * ***   * * *   * * *    ******  
consensus_9454#0      GA-AGAGGAAGAAGCCCAGGAAGGACAAGTGGGGCCAGCCTATCATCGACGCCGGCGATC 239
consensus_9454#1      GACACAAAAAGAAACCCG----AGGCAAGGGG---CACCTTATAACCG--------GATT 120
                      ** * *  ***** ***      * **** **   ** * *** * **        *** 
consensus_9454#0      GCCCGGCGGTTGAGCCGGAGCCTGAGCCAGAGCCGGAGCCTGTCCCAGCGCCCGCAGCGG 299
consensus_9454#1      -CCCGGGTAACGAGCTA-----------ACAAACGGA--CTGTCCAGGC--CTTTTGCG- 163
                       *****     ****             * *  ****  ******  **  *    *** 
consensus_9454#0      CGGCGGCGGCGGAGGAGGAGGAGGAGGCGGGGATCTATGAAACCGGCAAGGTGGTGGCCA 359
consensus_9454#1      ---------CGCGGGGAGAAGAGAAAAGCGGGATTAATAA---CGGCAAG-TGGGGGC-- 208
                               **  **  ** *** *    *****  ** *   ******* *** ***  
consensus_9454#0      GCGGCCTGCCGTACACCACCACCGAGGCGGAGATCCGGGAGCTCTTCGAGCGGTTCGGTC 419
consensus_9454#1      ACGGCCT-CCG-ACACCCCCAC-GAGG-GAAGACC--GGAGCTCTTCGAGCGGTCGGGCC 262
                       ****** *** ***** **** **** * *** *  *****************  ** *
consensus_9454#0      CCCTCCGGTCGCTCCAGCTCTCTCGCTTCCCGGACTCCGGCAACTTCCGCGGCCTCGCGT 479
consensus_9454#1      CCT--CGGT-GGTCCAGGTTTTT-GCTTTCCGGACTC-GGCAAATTCCGCGGCCTCGGGG 317
                      **   **** * ***** * * * **** ******** ***** ************* * 
consensus_9454#0      TCGTCTCCTTCGAGTCAAACGAGGTGGTAATGAAGTCTCTTGAGCTTGACGGATTCAAAA 539
consensus_9454#1      TTGTCTCCTTCGAGTCAAACAAGGTGGCAATGAAGTCTCTTGAGCTTGACGGATTCCAAA 377
                      * ****************** ****** **************************** ***
consensus_9454#0      TTGGCAACAGGTTTATGAGAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAA 599
consensus_9454#1      TTGGCAACAGGTTTATGAAAGTTGAAAGATGCAGGTTGGCTGCTGGCTCGAAGAGGAAAA 437
                      ****************** *****************************************
consensus_9454#0      GGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTG 659
consensus_9454#1      GGACTGTGGAGTTCCAAACTGATCCTAAGAAGGCTGATGGGTGTCTGTCAGCATATGTTG 497
                      ************************************************************
consensus_9454#0      GCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGA 719
consensus_9454#1      GCAATCTCAAATGGGATGTTACAGAAACAGACTTAAGGGACTTCTTCAAGTCACTGAAGA 557
                      ************************************************************
consensus_9454#0      TTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATG 779
consensus_9454#1      TTTCATCGATAAGGTTTGCTATCAACAAGAGAACAGGTGATTCTCGTGGTTTTTGTCATG 617
                      ************************************************************
consensus_9454#0      TTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGC 839
consensus_9454#1      TTGATTTTGAGGACGACGAGTCGCTTGAGAAGGCTGTAGGAATGAATCAATCTGAACTGC 677
                      ************************************************************
consensus_9454#0      GCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATA 899
consensus_9454#1      GCGGCCGACCTATCAAGATATCATATGCTGTCAGTAACAGGGGCTGAAGGCTACTAGATA 737
                      ************************************************************
consensus_9454#0      GTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACG 959
consensus_9454#1      GTAAACTTTGAGCATGAGCGAGCCTCAGTGTTATGCTTTTGCTCCCTCAGTTTTGTTACG 797
                      ************************************************************
consensus_9454#0      GTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTA 1019
consensus_9454#1      GTTATATATCCGTATTAAGTTTCTACTGAAAGTGTTGTTTCTTGCATCAATCTCTATGTA 857
                      ************************************************************
consensus_9454#0      GAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAAAAAAG 1079
consensus_9454#1      GAATGTAATTCACCGTGTGACAAATACTTGGTGCTACTTAATATCGACCTTATAA----- 912
                      *******************************************************     
consensus_9454#0      AAACAGAAATCTCTGTCAAATATAACTATCTGGTCATAGCAGTGGCGACTGATGTTGGAA 1139
consensus_9454#1      ----ACACTTCTCAGAAAAAAAAAAAAAAAAAAAAAAAAAAGTCGAGACTAGTTCTCCCT 968
                          * *  **** *  *** * **  *       * *  *** * ****  *  *    
consensus_9454#0      TGTTGTCTCATTGAGTTTGATGTCGAGGGCCTAAAGTTAGTAATTGTTGAGCTCAGAACT 1199
consensus_9454#1      CTCTCTCT---------------------------------------------------- 976
                         * ***                                                    
consensus_9454#0      AAACCTAATCTTTTAGAGTATTATATCCCATCTGAATAGACGTTCTTTAACTAGAAAAAA 1259
consensus_9454#1      ------------------------------------------------------------
                                                                                  
consensus_9454#0      AA 1261
consensus_9454#1      --
                        
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| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||