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Oryza sativa
cluster # 9461 cluster # 9461       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9461#0 length = 1973 sequences # 5  
consensus_9461#1 length = 685 sequences # 1  

consensusID : consensus_9461#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1973
fasta sequence
                              [AGGCCGCTCGTCTTCCTCCTCTCCACTCCCCTGCCGTCGCCACCGCCGCCGCCGCCGCCTCCGCTACTCCGTCCACGACTTCCGTTCCACAGCCAAGATGTGGAGGCGGCAGCATGCTCTCCTCCGCCGCATCTCGCTGCCCAAGCCTCCCGCGGCTACTGGGATCGGATGCTACTACGCCACCGAGCCGGAAGGCAGGAAGCCAAAGACGGCGCCTTTGCAGTCAAGGGGCATGGTGGATAGGTTCCGTTTGCGTGCCAAGGGTGGTGATGGTGGCAATGGCTGCATCAGTCTTCGGCGCTCCAGGTCAGATCGCCAAGGCAAACCTGATGGTGGTAATGGAGGAAGAGGTGGTGATGTCATTCTTGAGTGTTCAAGGTCTGTCTGGGATTTCAGTGGTTTGCAACATCACATGAAAGCAAGCCGAGGAGCCAATGGAGTTTCAAAGAATCAGATCGGGACAAGAGGTTCTGACAAGATTGCGCAGGTACCAGTAGGCACTGTTATTCATCTAGTTGAAGGGGAGCAACCTTCTCTTTCTGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCAGATGCTGTTGAACACTCACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATCCAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAGAAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGATGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATTTGATGATGAGGATGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAAGGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTTGATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAA-GGAGATGTGGCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCTGGAACTGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGTTGGTATGCCTAATGCTGGAAAGAGCACATTGCTGAGCGCTCTCTCTAGGGCTCGCCCAGAGATAGCTGACTATGCATTCACCACCCTAAGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAACTGCGGGATTTGGTCGTGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAGACCTTATGGGTGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAATTAGTGTTTCCAGGGTAGCAGGCTTCAGTTGTTTCATGCTATTCCATTGCATCTGTNATGATGCATCTAGGCTTTGGGGCCGAAAAAGTTCTTATGATTTCAAAAA]

[+] EMBL AK101431             [AGGCCGCTCGTCTTCCTCCTCTCCACTCCCCTGCCGTCGCCACCGCCGCCGCCGCCGCCTCCGCTACTCCGTCCACGACTTCCGTTCCACAGCCAAGATGTGGAGGCGGCAGCATGCTCTCCTCCGCCGCATCTCGCTGCCCAAGCCTCCCGCGGCTACTGGGATCGGATGCTACTACGCCACCGAGCCGGAAGGCAGGAAGCCAAAGACGGCGCCTTTGCAGTCAAGGGGCATGGTGGATAGGTTCCGTTTGCGTGCCAAGGGTGGTGATGGTGGCAATGGCTGCATCAGTCTTCGGCGCTCCAGGTCAGATCGCCAAGGCAAACCTGATGGTGGTAATGGAGGAAGAGGTGGTGATGTCATTCTTGAGTGTTCAAGGTCTGTCTGGGATTTCAGTGGTTTGCAACATCACATGAAAGCAAGCCGAGGAGCCAATGGAGTTTCAAAGAATCAGATCGGGACAAGAGGTTCTGACAAGATTGCGCAGGTACCAGTAGGCACTGTTATTCATCTAGTTGAAGGGGAGCAACCTTCTCTTTCTGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCAGATGCTGTTGAACACTCACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATCCAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAGAAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGATGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATTTGATGATGAGGATGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAAGGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTTGATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAA GGAGATGTGGCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCTGGAACTGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGTTGGTATGCCTAATGCTGGAAAGAGCACATTGCTGAGCGCTCTCTCTAGGGCTCGCCCAGAGATAGCTGACTATGCATTCACCACCCTAAGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAACTGCGGGATTTGGTCGTGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAGACCTTATGGGTGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGGAAATGTTTTGGAAAATTTCCCTCTC                                                                                                                                                                                                                ]
[+] EMBL AK105431             [                                                  GCCGCCGCCTCCGCTACTCCGTCCACGACTTCCGTTCCACAGCCAAGATGTGGAGGCGGCAGCATGCTCTCCTCCGCCGCATCTCGCTGCCCAAGCCTCCCGCGGCTACTGGGATCGGATGCTACTACGCCACCGAGCCGGAAGGCAGGAAGCCAAAGACGGCGCCTTTGCAGTCAAGGGGCATGGTGGATAGGTTCCGTTTGCGTGCCAAGGGTGGTGATGGTGGCAATGGCTGCATCAGTCTTCGGCGCTCCAGGTCAGATCGCCAAGGCAAACCTGATGGTGGTAATGGAGGAAGAGGTGGTGATGTCATTCTTGAGTGTTCAAGGTCTGTCTGGGATTTCAGTGGTTTGCAACATCACATGAAAGCAAGCCGAGGAGCCAATGGAGTTTCAAAGAATCAGATCGGGACAAGAGGTTCTGACAAGATTGCGCAGGTACCAGTAGGCACTGTTATTCATCTAGTTGAAGGGGAGCAACCTTCTCTTTCTGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCAGATGCTGTTGAACACTCACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATCCAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAGAAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGATGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATTTGATGATGAGGATGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAAGGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTTGATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAA GGAGATGTGGCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCTGGAACTGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGTTGGTATGCCTAATGCTGGAAAGAGCACATTGCTGAGCGCTCTCTCTAGGGCTCGCCCAGAGATAGCTGACTATGCATTCACCACCCTAAGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAACTGCGGGATTTGGTCGTGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAGACCTTATGGATGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAAT                                                                                                         ]
[+] EMBL CB096813             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AGAGGTTCTGACAAGATTGCGCAGGTACCAGTAGGCACTGTTATT ATCTAGTTGAAGGGGAGCAACCTTCTCTTTCTGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCGGATGCTGTTGAACACTCACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATCCAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAGAAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGATGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATCTGATGACGAGGATGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAAGGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTTGATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAAGGGAGATGTGGCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCCGGAACTGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGNTGGTATGCCTAATGCTGGAAA AGCACATTGCTGAGCGCTCTCTCTANGGCTCGCCCAGAGATAGCTGACTATGCATTCACCACCCTAANGNCCAATATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL AU161183             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAATTAGTGTTTCCAGGGTAGCAGGCTTCAGTTGTTTCATGCTATTCCATTGCATCTGTNATGATGCATCTAGGCTTTGGGGCCGAAAAAGTTCTTATGATTTCAAAAA]
[+] EMBL AU069295             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAATTAGTGTTTCCAGGGTAGCAGGCTTCAGTTGTTTCATGCTATTCCATTGCATCTGTGATGATGCATCTAGGCTTTGGGGCCGAAAAAGTTCTTATGATTTCAAAAA]


>consensus_9461#0 AGGCCGCTCGTCTTCCTCCTCTCCACTCCCCTGCCGTCGCCACCGCCGCCGCCGCCGCCT CCGCTACTCCGTCCACGACTTCCGTTCCACAGCCAAGATGTGGAGGCGGCAGCATGCTCT CCTCCGCCGCATCTCGCTGCCCAAGCCTCCCGCGGCTACTGGGATCGGATGCTACTACGC CACCGAGCCGGAAGGCAGGAAGCCAAAGACGGCGCCTTTGCAGTCAAGGGGCATGGTGGA TAGGTTCCGTTTGCGTGCCAAGGGTGGTGATGGTGGCAATGGCTGCATCAGTCTTCGGCG CTCCAGGTCAGATCGCCAAGGCAAACCTGATGGTGGTAATGGAGGAAGAGGTGGTGATGT CATTCTTGAGTGTTCAAGGTCTGTCTGGGATTTCAGTGGTTTGCAACATCACATGAAAGC AAGCCGAGGAGCCAATGGAGTTTCAAAGAATCAGATCGGGACAAGAGGTTCTGACAAGAT TGCGCAGGTACCAGTAGGCACTGTTATTCATCTAGTTGAAGGGGAGCAACCTTCTCTTTC TGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCAGATGCTGTTGAACACTC ACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATC CAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAG AAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGA TGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATTTGATGATGAGGA TGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAA GGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTT GATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAAGGAGATGTG GCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCTGGAAC TGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGTTGGTATGCC TAATGCTGGAAAGAGCACATTGCTGAGCGCTCTCTCTAGGGCTCGCCCAGAGATAGCTGA CTATGCATTCACCACCCTAAGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTC AGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGG CCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGC AGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAACTGCGGGATTTGGTCGT GGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAA AATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGT TCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCT GAGAGACCTTATGGGTGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGA TTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGGG AAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCT TTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGT CATAAAATTAGTGTTTCCAGGGTAGCAGGCTTCAGTTGTTTCATGCTATTCCATTGCATC TGTNATGATGCATCTAGGCTTTGGGGCCGAAAAAGTTCTTATGATTTCAAAAA



consensusID : consensus_9461#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 685
fasta sequence
                              [ATTCCCCACCCTTAGGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAATTGCGGGATTTGGTCGTGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAGACCTTATGGATGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGAGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAATTAGTGTTTCCAAAAAAAAAAAA]

[-] EMBL CA758971             [ATTCCCCACCCTTAGGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAATTGCGGGATTTGGTCGTGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAGACCTTATGGATGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGAGGAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAAAATTAGTGTTTCCAAAAAAAAAAAA]


>consensus_9461#1 ATTCCCCACCCTTAGGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCTCAGTGA AAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTGGCCATG CTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGGCAGCCA CGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAATTGCGGGATTTGGTCGTGGAGC TGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACAAAATAG ATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCGTTCCAA TGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTCTGAGAG ACCTTATGGATGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAGATTAAA TTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGAGGAAATG TTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGCTTTTTC TTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAGTCATAA AATTAGTGTTTCCAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9461#0      AGGCCGCTCGTCTTCCTCCTCTCCACTCCCCTGCCGTCGCCACCGCCGCCGCCGCCGCCT 60
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CCGCTACTCCGTCCACGACTTCCGTTCCACAGCCAAGATGTGGAGGCGGCAGCATGCTCT 120
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CCTCCGCCGCATCTCGCTGCCCAAGCCTCCCGCGGCTACTGGGATCGGATGCTACTACGC 180
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CACCGAGCCGGAAGGCAGGAAGCCAAAGACGGCGCCTTTGCAGTCAAGGGGCATGGTGGA 240
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TAGGTTCCGTTTGCGTGCCAAGGGTGGTGATGGTGGCAATGGCTGCATCAGTCTTCGGCG 300
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CTCCAGGTCAGATCGCCAAGGCAAACCTGATGGTGGTAATGGAGGAAGAGGTGGTGATGT 360
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CATTCTTGAGTGTTCAAGGTCTGTCTGGGATTTCAGTGGTTTGCAACATCACATGAAAGC 420
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      AAGCCGAGGAGCCAATGGAGTTTCAAAGAATCAGATCGGGACAAGAGGTTCTGACAAGAT 480
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TGCGCAGGTACCAGTAGGCACTGTTATTCATCTAGTTGAAGGGGAGCAACCTTCTCTTTC 540
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TGTAAATAAGCCAACCAGAGCTCTAGATCCCTGGGATATCCCAGATGCTGTTGAACACTC 600
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      ACCATTCAGCTCCAGTCGTATTGGCAGCAAGATGATGAAAGGTCTGGATAGCAGCCGATC 660
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CAGTCAACATATTTCTTCCAAGAAGAACACTGCTGAAAATGATTGTGAAAGAGGAAACAG 720
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      AAATCATCGGGGAAAGGAACCATATTACATGACTGAGTTTGTGCGCACCGAAGATTATGA 780
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TGGCACTAGCTATCCACACCAGGTGGGGGTAGATGAAAATGATCAATTTGATGATGAGGA 840
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TGATGAATTTTGGGAGGACGATGAAGAAGAGTTGGACATGGAGGAGGTAACGGAGGAAAA 900
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      GGAGGAGGAAGAAGATGTTCGGTATAGTGTTGCTGAAATGACAAAGCCTGGGCAGCGGTT 960
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      GATCATAGCAAGAGGAGGGGAAGGTGGACTAGGGAATGCTTGTATCCTCAAGGAGATGTG 1020
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      GCTGTCCAAAGCACATAAGGAAGAGGAGATGGCTAGCTTGAGTACTGGACATCCTGGAAC 1080
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TGAGACCTATCTTATCTTGGAACTGAAGAGCATTGCTGATGTTGGGCTTGTTGGTATGCC 1140
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      TAATGCTGGAAAGAGCACATTGCTGAGCGCTCTCTCTAGGGCTCGCCCAGAGATAGCTGA 1200
consensus_9461#1      ------------------------------------------------------------
                                                                                  

consensus_9461#0      CTATGCATTCACCACCCT-AAGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCT 1259
consensus_9461#1      ------ATTCCCCACCCTTAGGGCCCAATATTGGTAGCTTAACTTATGAGGACTACTTCT 54
                            **** ******* * ***************************************

consensus_9461#0      CAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTG 1319
consensus_9461#1      CAGTGAAAGTGGCTGATATACCCGGTCTGATCAAAGGTGCCCACGAGAACCGTGGCCTTG 114
                      ************************************************************

consensus_9461#0      GCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGG 1379
consensus_9461#1      GCCATGCTTTCTTGAGGCACATAGAGCGCACAAAAGTTCTGGCTTACGTACTTGACCTGG 174
                      ************************************************************

consensus_9461#0      CAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAACTGCGGGATTTGGTCG 1439
consensus_9461#1      CAGCCACGCTCAATGGTCGAAAGGGTGTCCCGCCATGGGAGCAATTGCGGGATTTGGTCG 234
                      ******************************************** ***************

consensus_9461#0      TGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACA 1499
consensus_9461#1      TGGAGCTGGAGCATTACCAAGAAGGCCTGACAAAGCGCCCATCATTGATTGTTGCAAACA 294
                      ************************************************************

consensus_9461#0      AAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCG 1559
consensus_9461#1      AAATAGATGAAGAGGGAGCCGATGAAATGTATGAAGAACTGAAGAAGAGAGTGCAGGGCG 354
                      ************************************************************

consensus_9461#0      TTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTC 1619
consensus_9461#1      TTCCAATGTTTCCAATATGTGCCATCTTGCAAGAGGGAGTACCAGATCTGAGAGTTGGTC 414
                      ************************************************************

consensus_9461#0      TGAGAGACCTTATGGGTGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAG 1679
consensus_9461#1      TGAGAGACCTTATGGATGCCTCAGATCCTCAGGGTATTGAGTTGAGCAAAATTGTGGTAG 474
                      *************** ********************************************

consensus_9461#0      ATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGGG 1739
consensus_9461#1      ATTAAATTAAGTTGAGCAAAATTATGGTAGAATTTTTCCTTGAGATGCTGATGCAGTGAG 534
                      ********************************************************** *

consensus_9461#0      GAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGC 1799
consensus_9461#1      GAAATGTTTTGGAAAATTTCCCTCTCGGCAGTTCGTACAAATGTGTTGCTTTTGTTTTGC 594
                      ************************************************************

consensus_9461#0      TTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAG 1859
consensus_9461#1      TTTTTCTTGTTATTACTTAGGCTGGGGATGTAAAATCCACAACAGATCGTGAACAACTAG 654
                      ************************************************************

consensus_9461#0      TCATAAAATTAGTGTTTCCAGGGTAGCAGGCTTCAGTTGTTTCATGCTATTCCATTGCAT 1919
consensus_9461#1      TCATAAAATTAGTGTTTCCAAAAAAAAAAAA----------------------------- 685
                      ********************    *  *                                

consensus_9461#0      CTGTNATGATGCATCTAGGCTTTGGGGCCGAAAAAGTTCTTATGATTTCAAAAA 1973
consensus_9461#1      ------------------------------------------------------
                                                                            




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)