cluster # 9478

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Oryza sativa
cluster # 9478 cluster # 9478 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9478#0 length = 1614 sequences # 6
consensusID : consensus_9478#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1614
fasta sequence
                              [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]

[+] EMBL AK071905             [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]
[+] EMBL AK099209             [ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCGGACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA]
[+] EMBL AK099071             [                                                                        AATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGCGGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGTCGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCGCCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAGCTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCACCATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGTCTGCCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCGCTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCAGTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTTCGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGCAGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTACACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGTCCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGATGTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTTAGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTCACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAGTGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGAAGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACATTGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAAC                                                         ]
[+] EMBL AU070386             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGT                                                   ]
[+] EMBL OSS13725A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      AACTGANCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTNTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGNTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTT                                                                                                                                                ]
[+] EMBL AU096457             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ACTGATCCAATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGGGATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGTGCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAAGTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAACTCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTAAATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAAAGTTTTCATACCAaaaaaaaa                                 ]




>consensus_9478#0
ACCCGCAAAAAGGACACCACCGCCGCAGCCCAAGCCCACCACCACCACCGCCGCCGCGCG
GACCAACCAACCAATCACTCGCTCGCCGCCGGCCATGTCCGCCGCCGCCGCCTCCTCCGC
GGCGGGGGACTCCGCCAAGCAGCCGCTCCTCCACCACCAGCGCGGGAACCCTCCCCACGT
CGCGTCGGTCTCCTCCCCGTCTCTCCCCTCGGCTCCCCCGGGGGCCCTCGCGGGCGGCCG
CCGCTTCCCCGGCGGCCTCGACGTCCCCAACCTCAAGAAGCGCGGCGGCGGGACGCGGAG
CTGGATCCGCGTCGAGGCCGCCACGGCGTCCGTGCAGACGCTGGAAGTGGACAAGGCCAC
CATGATGCGGCGGTGCGAGCTCCCCGCCCGCGACCTCCGCCTCCTCGACCCGCTCTTCGT
CTACCCCTCCACCATCCTCGGGAGGGAGCGCGCCATCGTCGTCAACCTCGAGCAGATCCG
CTGCGTCATCACCGCCGACGAGGTGCTCCTCCTCAACTCCCTCGACAGCTACGTCCTCCA
GTACGCCGCCGAGCTGCAGCGCCGCCTCCTCCAGCGCGCCGAGGGCGACGAGCTCCCCTT
CGAATTCCGCGCGCTCGAGCTCGCCCTCGAGGCCGCCTGCTCCTTCCTCGACGCACAGGC
AGCTGAATTGGAAATTGAAGCATATCCCTTGTTAGATGAGCTGACATCCAAAATCAGTAC
ACTGAATTTGGAACGTGTACGGCGATTAAAAAGTAGGCTAGTTGCTCTGACGAGAAGAGT
CCAGAAGGTCAGGGATGAAATAGAGCAGCTAATGGATGACGACGGAGATATGGCCGAGAT
GTATCTCAGTGAGAAGAAGTTGAGAACGGAGGCATCCTTCTATGGCGATCAGTCTATGTT
AGGCTACAATTCAGTAGGTGATGGGACATCGTTTTCAGCTCCTGTATCTCCTGTCTCGTC
ACCCACAGAATCACGGAAGTTGGAGAAAGCTTTCAGCTTGTGTAGGAGTAGGCATGACAG
TGTGAAGAGCTCAGATAACACAGCAACAGAACATATTCAAGAGCTGGAAATGTTACTGGA
AGCATATTTCGTTGTGATTGACAGCACTCTCAACAAGCTAACATCGCTGAAGGAGTACAT
TGATGACACTGAAGATTTTATCAACATTCAGTTGGACAATGTTCGGAACCAACTGATCCA
ATTCGAACTTTTACTCACAACTGCAACATTTGTTGTCGCCATTTTTGGAGTGGTTGCTGG
GATATTTGGGATGAACTTCGAGACCTCAGTTTTCAGCATACAGAATGCATTCCAGTGGGT
GCTCATCATCACTGGGGTGATCGGCGCTTTCATCTTCTGCGGATTCCTATGGTTCTTCAA
GTACAAAAGGCTGATGCCCCTGTAGATGATCATAGCATCCATAGGACCAATGAATCAAAC
TCAATTGTCGTCTACGCTGTTGAGGTACTTGATCAGAAGCCTGAATTTCTGCCCGATGTA
AATTACCATTCTTTTAGAATTCTACAGCATACCTACCAAAGAAATTGAATGAAAAACAAA
AGTTTTCATACCACGAGGCCTCTACTAAAAAGGGGTGATATTATAGGAAAAATA
clustalw multiple alignements is not computed in this case