These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9480#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 577 fasta sequence [AATCATACAGAGATCAGCTATAGCGA-GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG-CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC-GTCGCCATCGGCGTCC-ACG--TTTACG-CCGCCT-AATTACTTAA-TTACTTG-AACTTCTT-CTTC-TTCCCGTTCT-GCCTGCTTGTTTGGTC-AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL C74184 [AATCATACAGAGATCAGCTATAGCGATGGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGG GGCGAGACACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTCGGTCGCCATCGG GTCCAACGGTTTTACGCCCGCCTAAATTACTTAATTTACTTGAAACTTCTTACTTC TTNCCGTTCT Gacc ] [+] EMBL AU090490 [ ATCATACAGAGATCAGCTATAGCGA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGTCC ACG TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAA ] [+] EMBL AU070466 [ GA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGG GTCC ACG TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTCTTTCCCGTTCTGGCCTGCTTGTTTGG C AATTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGC ] [+] EMBL AU090526 [ GA GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGT C ACG TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTCAAGTTCTTG ] [+] EMBL AU090527 [ A GGCATACATTGTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCNAGGGCNAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTNGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATNTTCGTC GTCGCCATCGGNGTCC ACG TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTTCTTGGTGAANAGAAATTAAAATTACCGTTTGTTTCAGTCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAACGATTTGTTCAAAAAAAAAAAAAAAAAAAAAAAAAA] [+] EMBL AK060288 [ GTACATACACCAGCAGAGGTCGAGATCGAGTAGGTTTTAGTTGAGATCGATTGAGGCTGAGCATCGTCTATGGCGCCGCCGGCGGCGAG CACGGACTGGGGGCCGATCATCGTGGCGGTGATCCTGTTCGTGGTGCTGTCGCCGGGGCTGCTGTTCCAGCTGCCGGCGAGGGCGAGGGTGGTGGAGTTCGGCAACATGGCAACCAGCGCCATCGCCATCCTCGTCCACGCCGTCATCTTCTTCTGCCTCCTCACCATCTTCGTC GTCGCCATCGGCGTCC ACG TTTACG CCGCCT AATTACTTAA TTACTTG AACTTCTT CTTC TTCCCGTTCT GCCTGCTTGTTTGGTC AGTTCTTGCGAGTAGCATTAAGCAGGAACAGGATGTGCATGCGTATATTTGTATAGTCCTTGGTGAAGAGAAATTAAAATTACCGTTTGTTTCAGCCTGTGTGTATTTACAGAACAGCGGCGGACGCAACTTTAAAATATAGATGGGACGAAGAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||