cluster # 9482

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9482 cluster # 9482 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9482#0 length = 759 sequences # 6
consensusID : consensus_9482#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 759
fasta sequence
                              [TCAGCTCACCTTGTGATTAGCATAG-CCACTGCAGATAT-CGAA-TATTGCA-TTAAGCTAGC-TAGCTTAATTGGCATCA-TAAG-CAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAG-AGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCTT-CCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCGAGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGTGGGTCGGCGAGCGCGACGTCGACCGCAAGGCCT-CCGAC-TACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATC-TACACATCTCGATCTCCAACCACACCCACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGCGACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACCGGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTCTTCTCATATATGTATATGTTAAATTGTTATGTATGTTTGTTGTGGATTATTATGTTATATATGTTTATTTAGACCACGAATAATTGTAATGCCGGTTCACAAAAAGAGATCTTGCCATGTGTATATGTATGTGGAGCATGTGAACTCTTTTAAAAAAAA]

[+] EMBL AK062477             [TCAGCTCACCTTGTGATTAGCATAG CCACTGCAGATAT CGAA TATTGCA TTAAGCTAGC TAGCTTAATTGGCATCA TAAG CAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAG AGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCTT CCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCGAGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGTGGGTCGGCGAGCGCGACGTCGACCGCAAGGCCT CCGAC TACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATC TACACATCTCGATCTCCAACCACACCCACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGCGACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACCGGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTCTTCTCATATATGTATATGTTAAATTGTTATGTATGTTTGTTGTGGATTATTATGTTATAT                                                                                                   ]
[+] EMBL AU082264             [                 TAGCATNGCCCACTGCAGATTTNCGAATTATTGCATTTAAGCTAGCTTAGCTTAATTGCCATCATTAAGCCANCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAGAAGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCTTCCCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCGAGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGTGGGTCGGCGAGCGCGACGTCGACCGCAAGGCCTCCCGACTTACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATC TACACATCTCGATCTCCAACCACACCCACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGCGACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACCGGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTCTTCTCATATATGTATATGTTAAATTGTTATGTATGTTTGTTGTGGATTATTATGTTATATATGTTTATTTAGACCACGAATAATTGTAATGCCGGTTCACAAAAA                                                      ]
[+] EMBL AU071041             [                 TAGCATAG CCACTGCAGATAT CGAA TATTGCA TTAAGCTAGC TAGCTTAATTGGCATCA TAAG CAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAG AGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCTT CCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCGAGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGTGGGTCGGCGAGCGCGACGTCGACCGCAAGGCCT CCGAC TACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATC TACACATCTCGATCTCCAACCACACCCACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGCGACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACCGGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTCTTCTCATATATG                                                                                                                                                   ]
[+] EMBL AU070700             [                  AGCATAG CCACTGCAGATAT CGAA TATTGCA TTAAGCTAGC TAGCTTAATTGGCATCA TAAG CAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAG AGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCTT CCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCGAGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGTGGGTCGGCGAGCGCGACGTCGACCGCAANGCCT CCGAC TACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGNCGCCTAGCTAGCTCGATCTTANACATCTCGATt                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL C27227               [                                                            AGC TAGCTTAATTGGCATCA TAAG CAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAGATATAGGAG AGGAAGAGGGGATGGGAGGGAAGTCNTCGTTCCTGTNCCCGATCTTCAGCTT CCTGTCGTGCATGTCGAGGAGGTACGANGACNACGACGACGACGGCGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU184818             [                                                                                                                                                                                                                                                                                                                                             GCAAGGCCT CCGAC TACATCAACAGCTTCCACCAGAGGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATC TACACATCTCGATCTCCAACCACACCCACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGCGACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACCGGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTCTTCTCATATATGTATATGTTAAATTGTTATGTATGTTTGTTGTGGATTATTATGTTATATATGTTTATTTAGACCACGAATAATTGTAATGCCGGTTCACAGATCGAGATCTTGCCATGTGTATATGTATGTGGAGCATGTGAACTCTTTTAAAAAAAA]




>consensus_9482#0
TCAGCTCACCTTGTGATTAGCATAGCCACTGCAGATATCGAATATTGCATTAAGCTAGCT
AGCTTAATTGGCATCATAAGCAGCAGAAGAAGAAGAGAAGAGAAGAGAGGAAGCTAGAAG
ATATAGGAGAGGAAGAGGGGATGGGAGGGAAGTCGTCGTTCCTGTGCCCGATCTTCAGCT
TCCTGTCGTGCAAGTCGAGGAGGTACGAGGACGACGACGACGACGGCGAGCTGAGCGGCG
AGTGGCCGGCGAGGTACGGGAGCAAGGTGAGGTCGAGCGACGAGGACTACGGCGCGTGGT
GGGTCGGCGAGCGCGACGTCGACCGCAAGGCCTCCGACTACATCAACAGCTTCCACCAGA
GGAAGCAGGTCGCCGCCGCCTAGCTAGCTCGATCTACACATCTCGATCTCCAACCACACC
CACAGCTCAACGATACCAATCTTTCATTGGATCGAGGGGGACTAGCGTACGCGCGACGGC
GACGGCGGACGACGGCCGCCGGCGCGGCCATATATATGTACTGCATCTGTTGTCTCAACC
GGCCATTTGTGTACCGCACCGCATGTACGTACGTAGGTCTCCGTTTACATAATTAAATTC
TTCTCATATATGTATATGTTAAATTGTTATGTATGTTTGTTGTGGATTATTATGTTATAT
ATGTTTATTTAGACCACGAATAATTGTAATGCCGGTTCACAAAAAGAGATCTTGCCATGT
GTATATGTATGTGGAGCATGTGAACTCTTTTAAAAAAAA
clustalw multiple alignements is not computed in this case