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Oryza sativa
cluster # 9493 cluster # 9493       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9493#0 length = 1674 sequences # 4  
consensus_9493#1 length = 699 sequences # 1  
consensus_9493#2 length = 444 sequences # 1  

consensusID : consensus_9493#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1674
fasta sequence
                              [CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGCTGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGGAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCCGGTAACCAACTTATTTTACCCTCCTCCTCCTCCTTCTATCCCTTGTTCTTTTAACAGCAAAAGAGAGAGAGAGAGAGAGAGAATATGTTGTTTTTGATAGAAATTATCACCGTGGCATCGATCATGAGTTGTTAATTTTTGTAATATTGGTATCCAAAAACTCACCCAAATAGCATGATTTGACTGTTCCTACACTGAATAAATATGAGGCCTTGTTCTTGCTAATGCATTGTTTGCCTGGTTGATGGAATGATGGTTTGCACATCGAAGTCACTGCACTGTGGTTGAAGAAATAAATCCGGTTAGGATGTTTTAAACAAACGGCCGCATAAACTGTTCTTACTGCCATGTATAATGTCATATTTCTAGTGACAAGTCGATGTAATTAACACAAATTTGTCCGGCGAAAAAAAAAAGGTAATTACTACAAATTTGGGAAAGTAAAGGAATGTTTTTGCCTTTTTGTTGCATAAGTCAATAAGTGGCGTAGGGAAGTTGGCTTTGCATTTCTGTCTCTATCAGGGCAAAACGAAACAAAGAAAAAACATTTAGGTGTGAATATAAGACCAAGCTCCATGATTTGGGTCGACCAGAAGTTTGTAGGCATCCAGATTCCTGTTTTTTGCTTCCCCAGTCCTGTCCTGTAATAATCGTAGTTTAATCTGAAGACGCAACGATGTCAGATTATACCAGTTCGCCTTGGGTATAATACTAGTTGAATGATTAGTCTCAGCCTACCGTTGGATATAGTATTGTAGCCATTTCACATTTGGGATGATGTTTATAAATCAACTAGGAAAATAGCTAATTTCTTTGACCTGATGAAATGGAACCATGAAACTTAATCTAGATTTGTTTAGCACTGTTTTGTTGTGCTGGTAACTTTTACCAAACATCATTACAAAATTCATTTTTTTTTGGAAGTCACACCAGTTCGCTACTATATCTGTTGTATTTGGCAACCGTCCTTTTCCTTAGATAATTTTAATACATATATTTGTATGGTTTTCTGATAAGTGTCCTACAATAATATTTTGCAGGGAATTCCCCTACGAACTCTCCTCCAGCCTCTCCATCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGATGAATTGTTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK069702             [CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGCTGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGGAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCCGGTAACCAACTTATTTTACCCTCCTCCTCCTCCTTCTATCCCTTGTTCTTTTAACAGCAAAAGAGAGAGAGAGAGAGAGAGAATATGTTGTTTTTGATAGAAATTATCACCGTGGCATCGATCATGAGTTGTTAATTTTTGTAATATTGGTATCCAAAAACTCACCCAAATAGCATGATTTGACTGTTCCTACACTGAATAAATATGAGGCCTTGTTCTTGCTAATGCATTGTTTGCCTGGTTGATGGAATGATGGTTTGCACATCGAAGTCACTGCACTGTGGTTGAAGAAATAAATCCGGTTAGGATGTTTTAAACAAACGGCCGCATAAACTGTTCTTACTGCCATGTATAATGTCATATTTCTAGTGACAAGTCGATGTAATTAACACAAATTTGTCCGGCGAAAAAAAAAAGGTAATTACTACAAATTTGGGAAAGTAAAGGAATGTTTTTGCCTTTTTGTTGCATAAGTCAATAAGTGGCGTAGGGAAGTTGGCTTTGCATTTCTGTCTCTATCAGGGCAAAACGAAACAAAGAAAAAACATTTAGGTGTGAATATAAGACCAAGCTCCATGATTTGGGTCGACCAGAAGTTTGTAGGCATCCAGATTCCTGTTTTTTGCTTCCCCAGTCCTGTCCTGTAATAATCGTAGTTTAATCTGAAGACGCAACGATGTCAGATTATACCAGTTCGCCTTGGGTATAATACTAGTTGAATGATTAGTCTCAGCCTACCGTTGGATATAGTATTGTAGCCATTTCACATTTGGGATGATGTTTATAAATCAACTAGGAAAATAGCTAATTTCTTTGACCTGATGAAATGGAACCATGAAACTTAATCTAGATTTGTTTAGCACTGTTTTGTTGTGCTGGTAACTTTTACCAAACATCATTACAAAATTCATTTTTTTTTGGAAGTCACACCAGTTCGCTACTATATCTGTTGTATTTGGCAACCGTCCTTTTCCTTAGATAATTTTAATACATATATTTGTATGGTTTTCTGATAAGTGTCCTACAATAATATTTTGCAGGGAATTCCCCTACGAACTCTCCTCCAGCCTCTCCATCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGATGAATTG                                      ]
[+] EMBL AK063215             [CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGCTGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGGAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCCGGTAACCAACTTATTTTACCCTCCTCCTCCTCCTTCTATCCCTTGTTCTTTTAACAGCAAAAGAGAGAGAGAGAGAGAGAGAATATGTTGTTTTTGATAGAAATTATCACCGTGGCATCGATCATGAGTTGTTAATTTTTGTAATATTGGTATCCAAAAACTCACCCAAATAGCATGATTTGACTGTTCCTACACTGAATAAATATGAGGCCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL CA760425             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TCTTACTGCCATGTATAATGTCATATTTCTAGTGACAAGTCGATGTAATTAACACAAATTTGTCCGGCG  AAAAAAAAGGCAATTACTACAAATTTGGGAAAGTAAAGGAATGTTTTTGCCTTTTTGTTGCATAAGTCAATAAGTGGCGTAGGGAAGTTGGCTTTGCATTTCTGTCTCTATCAGGGCAAAACGAAACAAAGAAAAAACATTTAGGTGTGAATATAAGACCAAGCTCCATGATTTGGGTCGACCAGAAGTTTGTAGGCATCCAGATTCCTGTTTTTTGCTTCCCCAGTCCTGTCCTGTAATAATCGTAGTTTAATCTGAAGACGCAACGATGTCAGATTATACCAGTTCGCCTTGGGTATAATACTAGTTGAATGATTAGTCTCAGCCTACTGTTGGATATAGTATTGTAGCCATTTCACATTTGGGATGATGTTTATAAATCAACTAGGAAAATAGCTAATTTATTTGACCTGATGAAATGGAACCATGAAACTTAATCTAGATTTGTTTAGCACTGTTTTGTTGTGCTGGTAACTTTTACCANACATCATTTCAAAATTCA TTTTTTTTGGAAGTCACACCAGTTCGCTACTATATCTGNTGTATTTGGCAACCGTCCTTTTCCTTAGATAATTNTAATACATATATTTGTATGGNTTTCTGATAAGTGTCCTACAATAATATTT                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL CA753934             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGATGAATTGTTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9493#0 CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGC TGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACC CGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGG AGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCG GCATCAGCCAGACCACCAGCATGTGCCCCGGTAACCAACTTATTTTACCCTCCTCCTCCT CCTTCTATCCCTTGTTCTTTTAACAGCAAAAGAGAGAGAGAGAGAGAGAGAATATGTTGT TTTTGATAGAAATTATCACCGTGGCATCGATCATGAGTTGTTAATTTTTGTAATATTGGT ATCCAAAAACTCACCCAAATAGCATGATTTGACTGTTCCTACACTGAATAAATATGAGGC CTTGTTCTTGCTAATGCATTGTTTGCCTGGTTGATGGAATGATGGTTTGCACATCGAAGT CACTGCACTGTGGTTGAAGAAATAAATCCGGTTAGGATGTTTTAAACAAACGGCCGCATA AACTGTTCTTACTGCCATGTATAATGTCATATTTCTAGTGACAAGTCGATGTAATTAACA CAAATTTGTCCGGCGAAAAAAAAAAGGTAATTACTACAAATTTGGGAAAGTAAAGGAATG TTTTTGCCTTTTTGTTGCATAAGTCAATAAGTGGCGTAGGGAAGTTGGCTTTGCATTTCT GTCTCTATCAGGGCAAAACGAAACAAAGAAAAAACATTTAGGTGTGAATATAAGACCAAG CTCCATGATTTGGGTCGACCAGAAGTTTGTAGGCATCCAGATTCCTGTTTTTTGCTTCCC CAGTCCTGTCCTGTAATAATCGTAGTTTAATCTGAAGACGCAACGATGTCAGATTATACC AGTTCGCCTTGGGTATAATACTAGTTGAATGATTAGTCTCAGCCTACCGTTGGATATAGT ATTGTAGCCATTTCACATTTGGGATGATGTTTATAAATCAACTAGGAAAATAGCTAATTT CTTTGACCTGATGAAATGGAACCATGAAACTTAATCTAGATTTGTTTAGCACTGTTTTGT TGTGCTGGTAACTTTTACCAAACATCATTACAAAATTCATTTTTTTTTGGAAGTCACACC AGTTCGCTACTATATCTGTTGTATTTGGCAACCGTCCTTTTCCTTAGATAATTTTAATAC ATATATTTGTATGGTTTTCTGATAAGTGTCCTACAATAATATTTTGCAGGGAATTCCCCT ACGAACTCTCCTCCAGCCTCTCCATCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCA GTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAA TTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACG GTGTTTGTTGATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGT ATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAG CGTAATGGATGAATTGTTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_9493#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 699
fasta sequence
                              [CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGCTGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGCAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCCGGGAATNCCCCTACGAACCCTCCTCCAGCCTCTCCATCAGGTGGCCAAAACCCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGAATGATGAGCCGGTTCCTAACCGTGGTGGTCTGTATTGGCATAAAAATGNTGGTCCCCTATCAGAGATATTATCCCTAATGCCACGGTAGAGGATTNACATTTAACNGTGTTTGTTAAATTGGCGGATTCATATTCTGTTACCTGGATCCAAATTCTNTGGCGGTGTCTAACTGTGCAAACTAAAAAACCTACGTGGTGTGTATCAAAACCTGTCTAATCAGACCTATTGATAATTGTTATTTTACAAAAAACAAAACAACCTTAGGGGCCCCAACGACAGAACATGATTTTNTTNTANTNNNNCNNNNNNNNNNNNNANNNAANNNNNNNCANNNNNNNNNAN]

[+] EMBL CA753340             [CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGCTGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGCAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCCGGGAATNCCCCTACGAACCCTCCTCCAGCCTCTCCATCAGGTGGCCAAAACCCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGAATGATGAGCCGGTTCCTAACCGTGGTGGTCTGTATTGGCATAAAAATGNTGGTCCCCTATCAGAGATATTATCCCTAATGCCACGGTAGAGGATTNACATTTAACNGTGTTTGTTAAATTGGCGGATTCATATTCTGTTACCTGGATCCAAATTCTNTGGCGGTGTCTAACTGTGCAAACTAAAAAACCTACGTGGTGTGTATCAAAACCTGTCTAATCAGACCTATTGATAATTGTTATTTTACAAAAAACAAAACAACCTTAGGGGCCCCAACGACAGAACATGATTTTNTTNTANTNNNNCNNNNNNNNNNNNNANNNAANNNNNNNCANNNNNNNNNAN]


>consensus_9493#1 CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGC TGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACC CGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGC AGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCG GCATCAGCCAGACCACCAGCATGTGCCCCGGGAATNCCCCTACGAACCCTCCTCCAGCCT CTCCATCAGGTGGCCAAAACCCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGAATGA TGAGCCGGTTCCTAACCGTGGTGGTCTGTATTGGCATAAAAATGNTGGTCCCCTATCAGA GATATTATCCCTAATGCCACGGTAGAGGATTNACATTTAACNGTGTTTGTTAAATTGGCG GATTCATATTCTGTTACCTGGATCCAAATTCTNTGGCGGTGTCTAACTGTGCAAACTAAA AAACCTACGTGGTGTGTATCAAAACCTGTCTAATCAGACCTATTGATAATTGTTATTTTA CAAAAAACAAAACAACCTTAGGGGCCCCAACGACAGAACATGATTTTNTTNTANTNNNNC NNNNNNNNNNNNNANNNAANNNNNNNCANNNNNNNNNAN



consensusID : consensus_9493#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 444
fasta sequence
                              [TTTTTTCTCACATGTAAAATAGTTAAAATTAAAAGTTTATTCGAATTGATTACGCATGTAACATCACGATAACACTTTACAGAGTACTTTTTTTTAACCTCAATTCTTAATTCTATTGTTTGCAGCCTCTCCATCCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGATGAATTGTTTATCTTCTAAAAAAAA]

[+] EMBL AU075507             [TTTTTTCTCACATGTAAAATAGTTAAAATTAAAAGTTTATTCGAATTGATTACGCATGTAACATCACGATAACACTTTACAGAGTACTTTTTTTTAACCTCAATTCTTAATTCTATTGTTTGCAGCCTCTCCATCCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGATGAATTGTTTATCTTCTAAAAAAAA]


>consensus_9493#2 TTTTTTCTCACATGTAAAATAGTTAAAATTAAAAGTTTATTCGAATTGATTACGCATGTA ACATCACGATAACACTTTACAGAGTACTTTTTTTTAACCTCAATTCTTAATTCTATTGTT TGCAGCCTCTCCATCCAGGTGGCAAAAACGCTGGTCATCGCACTATGTCAGTTGGTCTTC CAGGATTGATGAGCTTGTTCCTAGCGTTGTGGTCTGTATTGGCATAAGAATTTTGGTTCC ATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACATGTGACGGTGTTTGTTG ATTGGCTGTATCATCATTCTGTACTTGGATCAGAATTCGTTTTGCTGTGTATCAATGTCG CAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTGATCAAAGCGTAATGGAT GAATTGTTTATCTTCTAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9493#0      CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGCGTCGAAGC 60
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      TGGTGCCGTGCGCGCAGTACATGAACGGGACGGACACGCCGCCGGCGGCGTGCTGCGACC 120
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTCTACGCCTCGCCGG 180
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      AGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTCCGCCTCTCCACGCGGTGCG 240
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      GCATCAGCCAGACCACCAGCATGTGCCCCGGTAACCAACTTATTTTACCCTCCTCCTCCT 300
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CCTTCTATCCCTTGTTCTTTTAACAGCAAAAGAGAGAGAGAGAGAGAGAGAATATGTTGT 360
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      TTTTGATAGAAATTATCACCGTGGCATCGATCATGAGTTGTTAATTTTTGTAATATTGGT 420
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      ATCCAAAAACTCACCCAAATAGCATGATTTGACTGTTCCTACACTGAATAAATATGAGGC 480
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CTTGTTCTTGCTAATGCATTGTTTGCCTGGTTGATGGAATGATGGTTTGCACATCGAAGT 540
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CACTGCACTGTGGTTGAAGAAATAAATCCGGTTAGGATGTTTTAAACAAACGGCCGCATA 600
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      AACTGTTCTTACTGCCATGTATAATGTCATATTTCTAGTGACAAGTCGATGTAATTAACA 660
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CAAATTTGTCCGGCGAAAAAAAAAAGGTAATTACTACAAATTTGGGAAAGTAAAGGAATG 720
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      TTTTTGCCTTTTTGTTGCATAAGTCAATAAGTGGCGTAGGGAAGTTGGCTTTGCATTTCT 780
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      GTCTCTATCAGGGCAAAACGAAACAAAGAAAAAACATTTAGGTGTGAATATAAGACCAAG 840
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CTCCATGATTTGGGTCGACCAGAAGTTTGTAGGCATCCAGATTCCTGTTTTTTGCTTCCC 900
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      CAGTCCTGTCCTGTAATAATCGTAGTTTAATCTGAAGACGCAACGATGTCAGATTATACC 960
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      AGTTCGCCTTGGGTATAATACTAGTTGAATGATTAGTCTCAGCCTACCGTTGGATATAGT 1020
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ------------------------------------------------------------
                                                                                  

consensus_9493#0      ATTGTAGCCATTTCACATTTGGGATGATGTTTATAAATCAACTAGGAAAATAGCTAATTT 1080
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      --------CGCTGGCGGCGGGCGGGGCGGCGCAGTCGTCGCCGAGCACGCCGAGCTGCGC 52
                                                                                  

consensus_9493#0      CTTTGACCTGATGAAATGGAACCATGAAACTTAATCTAGATTTGTTTAGCACTGTTTTGT 1140
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      GTCGAAGCTGGTGCCGTGCG--CGCAGTACATGAACGGGACGGACACGCCGCCGG--CGG 108
                                                                                  

consensus_9493#0      TGTGCTGGTAACTTTTACCAAACATCATTACAAAATTCATTTTTTTTTGGAAGTCACACC 1200
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      CGTGCTG-CGACCCGCTCAAGGAGGCGGTGAAGAACGAGCTCAAGTGCCTCTGCGACCTC 167
                                                                                  

consensus_9493#0      AGTTCGCTACTATATCTGTTGTATTTGGCAACCGTCCTTTTCCTTAGATAATTTTAATAC 1260
consensus_9493#2      -----------TTTTTTCTCACATGTAA-AATAGTTAAAATTAAAAGTTTATTCGAATTG 48
consensus_9493#1      TACGCCTCGCCGCAGATCTTCAAGGCCTTCAACATCAACATCTCCGACGCCCTC-----C 222
                                      * *   *       *   *     *           *       

consensus_9493#0      ATATATTTGTATGGTTTTCTGATAAGTGTCCTACAATAATATTTTGCAGGGAATTCCCCT 1320
consensus_9493#2      AT-TACGCATGTAACATCACGATAA-CACTTTACAG-AGTACTTTTTTTTAACCTCAATT 105
consensus_9493#1      GCCTCTCCACGCGGTGCGGCATCAGCCAGACCACCAGCATGTGCCCC-GGGAATNCCCCT 281
                         *                   *        **     *           *   *   *

consensus_9493#0      ACGAACTCT----CCTCCAGCCTCTCCATC-AGGTGGCAAAAACGCTGGTCATCGCACTA 1375
consensus_9493#2      CTTAATTCTATTGTTTGCAGCCTCTCCATCCAGGTGGCAAAAACGCTGGTCATCGCACTA 165
consensus_9493#1      ACGAACCCT----CCTCCAGCCTCTCCATC-AGGTGGCCAAAACCCTGGTCATCGCACTA 336
                         **  **      * ************* ******* ***** ***************

consensus_9493#0      TGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGC-GTTGTGGTCTGTATTGGCA 1434
consensus_9493#2      TGTCAGTTGGTCTTCCAGGATTGATGAGCTTGTTCCTAGC-GTTGTGGTCTGTATTGGCA 224
consensus_9493#1      TGTCAGTTGGTCTTCCAGGAATGATGAGCCGGTTCCTAACCGTGGTGGTCTGTATTGGCA 396
                      ******************** ********  ******* * ** ****************

consensus_9493#0      TAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACAT 1494
consensus_9493#2      TAAGAATTTTGGTTCCATATCAGAGATGTTATCGCTTATGCCACAGTAGAGGATTTACAT 284
consensus_9493#1      TAAAAATGNTGGTCCCCTATCAGAGATATTATCCCTAATGCCACGGTAGAGGATTNACAT 456
                      *** ***  **** ** ********** ***** ** ******* ********** ****

consensus_9493#0      GTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGT-ACTTGGATCAGAATTCGTTTT 1553
consensus_9493#2      GTGACGGTGTTTGTTGATTGGCTGTATCATCATTCTGT-ACTTGGATCAGAATTCGTTTT 343
consensus_9493#1      TTAACNGTGTTTGTTAAATTGGCGGATTCATATTCTGTTACCTGGATCCAAATTC-TNTG 515
                       * ** ********* * * *  * **    ******* ** ******  ***** * * 

consensus_9493#0      GCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTG 1613
consensus_9493#2      GCTGTGTATCAATGTCGCAAGTCAGAAGACTTACATTGTGTTGTACTTAGACCTGTGCTG 403
consensus_9493#1      GCGGTGTCTAACTGT-GCAAACTAAAAAACCTACGTGGTGT-GTATCAAAACCTGT-CTA 572
                      ** **** * * *** ****   * ** ** *** * **** ***   * ****** ** 

consensus_9493#0      ATCAAAGCGTAATGGATGAATTGTTTATCTTCAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1673
consensus_9493#2      ATCAAAGCGTAATGGATGAATTGTTTATCTTCTAAAAAAAA------------------- 444
consensus_9493#1      ATCAGACCT--ATTGAT-AATTGTTATTTTACAAAAAACAAAACAACCTTAGGGGCCCCA 629
                      **** * *   ** *** *******  * * * ***** **                   

consensus_9493#0      A----------------------------------------------------------- 1674
consensus_9493#2      ------------------------------------------------------------
consensus_9493#1      ACGACAGAACATGATTTTNTTNTANTNNNNCNNNNNNNNNNNNNANNNAANNNNNNNCAN 689
                                                                                  

consensus_9493#0      ----------
consensus_9493#2      ----------
consensus_9493#1      NNNNNNNNAN 699
                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)