These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9508#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 615 fasta sequence [AGAAAAGAGGAAAAAAAAGAAAACTGTAGCGCAATCTCTCCCCCTCGCGTCTCGCGTCCCGGCGGCGGCGGCGGCGGCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCGACGTGGCGGCGCTGCGCAAGTGCCTCGAGGAGAACAAGGGCGACCGC-TCCAAGTGCCAGGACCACATCGACGCCTTCCGCTCCTCCTGCTCCACCAACCCCCCGCCGCCTCGCAGGTCCTAGAGCTTTCGCCCAATCAGCCAAAGCAACTCTGTGTCTTTCTTTTTTTCTTTTTTGCTTTTACTATCCTCGATCCGAATAAATGGTTGTTTCCAGTAGCTGTTTCGATCAAACAAGCAGAGTAAAAACAATTGGCATATGAACAAATGGTTGCTCAGCTGCACTGCAGTCTGCAGGATCAATGTTTGTTCTTGGTTTTGTCTGGAAATGTATTGGATGATTAAGAGCATAATTAGCTTCATCCTCTCTAAAAA] [+] EMBL AK058437 [AGAAAAGAGGAAAAAAAAGAAAACTGTAGCGCAATCTCTCCCCCTCGCGTCTCGCGTCCCGGCGGCGGCGGCGGCGGCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCGACGTGGCGGCGCTGCGCAAGTGCCTCGAGGAGAACAAGGGCGACCGC TCCAAGTGCCAGGACCACATCGACGCCTTCCGCTCCTCCTGCTCCACCAACCCCCCGCCGCCTCGCAGGTCCTAGAGCTTTCGCCCAATCAGCCAAAGCAACTCTGTGTCTTTCTTTTTTTCTTTTTTGCTTTTACTATCCTCGATCCGAATAAATGGTTGTTTCCAGTAGCTGTTTCGATCAAACAAGCAGAGTAAAAACAATTG ] [+] EMBL CA758661 [ AAACTGTAGCGCAATCTCTCCCCCTCGCGTCTCGCGTCCCGGCGGCGGCGGCGGCGGCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACAACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCGACGTGGCGGCGC ] [+] EMBL AU081300 [ TCCCCCTCGCGTCTCGCGTCCCGNCGCCGCCGCCGNCGNCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCGACGTGGCGGCGCTGCGCAAGTGCCTCGAGGAGAACAAGGGCGACCGC TCCAAGTGCCAGGACCACATCGACGCCTTCCGCTCCTCCTGCTCCACCAACCCCCCGCCGCCTCGCAGGTCCTAGAGCTTTCGCCCAATCAGCCAAAGCAACTCTGTGTCTTTCTTTTTTTCTTTTTTGCTTTTACTATCCTCGATCCGAATAAATGGTTGTTTCCAGTAGCTGTTTCGATCAAACAAGCAGAGTAAAAACAATTGGCATATGAACAAATGGTTGCTCAGCTGCACTGCAGTCTGCAGGATCAATGTTTGTTCTTGGTTTTGTCTGGAAATGTATTGGATGATTAAGAGCATAATTAGCTTCATCCTCTCTAAAAA] [+] EMBL OSC2781 [ CCCCCTCGCGTCTCG GTCCCGGCGGCGGCGGCGGCGGCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCGACGTGGCGGCGTTGCGCAAGTGCCTCGAGGAGAACAAGGGCGACCGCTTCCAAGTGCCAGGACCACATCGACGGCTTCCG TTCTNCTGCTTCANCAACCCCCCGCCG CTTGCAGGTCCTAGAG TTTNGGCCAATCAG CAAAG AACTCTGTGTCTTTCTTTTTTTCTT ] [+] EMBL AU082315 [ GCGGCGTGCCTCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAAGCAGCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAGAAGAAGGCGGCGGCGTGCNACGTGGCGGCGCTGCGCAAGTNCCTCGAGGAGAACAAGGGCGACCGC TCCAAGTGCCAGGACCACATCGACGCCTTCCGCTNCTCCTGCTTCACCAACCNCCCGCCGCCTTG AGGTCCTAGAG TTTTG CCAATaa ] [+] EMBL AU182496 [ TCCTCCCGGCGACCTCGAGCCTTCCGCTCATCCATCTCTGCAGAGGACACCACCAGGGTCCCATGGAACCANCGGCGGCGGCGGAGGCGGAGGCGGGAACAGGCGGAGGCGGCGGAAGGGACGGGACGGCGACGAAAAAGAAGGCGGCGGCGTGCGACGTGGCGGCGCTGCGCAAGTGCCTCGAGGAGAACAAGGGCGACCGC TCCAAGTGCCAGGACCACATCGACGCCTTCCGCTCCTCCTGCTCCACCAACCCCCCGCCGCCTNGCAGGTCCTAGAGCTTTCGCCCAATCAGCCAAAGCAACTCTGTGTCTTTCTTTTTTTCTTTTTTGCTTTTACTATCCTCGATCCGAATAAATGGTTGTTTCCAGTAGCTGTTTCGATCAAACAAGCAGAGTAAAAACAATTGGCATATGAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||