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Oryza sativa
cluster # 9536 cluster # 9536       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9536#0 length = 3252 sequences # 4  
 consensus_9536#1 length = 435 sequences # 1  
consensus_9536#2 length = 434 sequences # 1  
consensusID : consensus_9536#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 3252
fasta sequence 
                              [TATTCTTCCATCGCAGGAGGTGCGCTTCCTATCCCCATCGCCACCCATGGCGACTCCCGCCGCTTCCCCTCTCCTGCTGCCGCTCCCCCTCCCCCTCCCGGCCTCCACCTTCCCGCCTCGCCGCGCCGTTCCCTGCGCCCGCCGCCTCGTCTTGCGGCCTCCCCGCGCCGGACGCCCTCGCCTCCGGGACCCGCCTCCCGCGGCACCCCCACCGGCGGCGGAGGAGGTCGGCGAGGAGGAAGAGGACGACGATGCCCCCCCGCTCAGGCTCCTCGAACCGCCCCAGGAGGACGACCCCTTCCCGCCCGAGATGGAGCCGGCCGACCCCGACTTCTACCGGATAGGGTACGCGCGGATGATGCGGGCGTACGGGGTTGAGTTCTTGGAAGGCCCCGATGGGATGGCCGTCTATGCCTCCCGGGACGTCGACCCACTCCGCAGAGCTAGAGTGATTATGGAGATTCCATTGGAGCTAATGCTGACTATAACTCAAAAACGCCCTTGGATGTTTTTCCCCGACATTATTCCACTAGGCCATCCCATATTTGACATCATTGAATCAACAGATCCTGAGGTAAATGGAGCCCTCTAACCCTCTAATTATGGTATGTTCCAGTGAAGACTGTATGTGCATTCCAGAGTTTGTGTTTTTTAGTTTCTACAGAATCACTTATGAGGAACATTGTGTAATTAAGATTCAATAGCGCTTTGACTGCCCATTCCATCTACTATGAAAATAAGCTGTTATATTGGATAAAAGGGATGGTATTACTCAACACTTGCAACCTGTTTTCTTCCTTCATGCGGTGTCAAAGCTTCATAAGTGATGTAGACTGCATCCTAACGCAATCTGTACCCTCTTGCAGACAGATTGGGATCTAAGGTTAGCTTGCCTTCTTCTCTATGCATTTGATGTAGAAGACAACTTTTGGCAGCTATATGGTGATTTTTTGCCTAGTGTTGATGAATGCACTAGCTTGCTTTTGGCACCAAAGGTATTGTAAATCTAAACAAAATGAATTGTAGTCTTCTTAAACCTGACAATACAGTTTGAATGAATTTACATGCCTGGCTTGCCAGGACGATCTAATGGAACTAGAAGACCAAGATCTTGCCACGAAAATGTTAAAGAACCAGAAGAGAGCAATTGATTTTTGGCAAAAACATTGGGTACACTTCTGTACTATTTGATCAACTTCGCTGGCTTGGGTACATCTAACACTAGCTTGATGGGTAATGTCCAGCATAAAACAATCCCTCTAAAGCTAAAGCGTCTTGCCCCTGACCATGAAAGATTTCTATGGGCACTGAGTATTGTTCAGTCTCGCTCTGTCAATTTGAAACTGAGAATGGGAGCCTTCCTCCAAGATGCAAATGTCCTAGTGCCGTATGCTGGTACATGTTTTCTTATCTGTTCCCCTTTATGCTCTTTATTTTTATTTTCAGTGTGTATTAAGCACCGATTACTAAAATTAAGAATAAAATCACTTAGTTTCTTCAGCTTGCGATGATAATCAGATGTCTAACAGTCTAAGTCAAGGCTGCGGTCTGAGGGATCTTTTGCTCCATTTATTTTGAGCTGGCGAATGCTATAAAGGTTTTTATAATGTTATAGCGCTAATGTTACTTGCACAGTAAATCATAGTTACCAACTGATCCAAGATATTATATTTTCTAATATCAGCACTACTTCTGTATGGTTAAACTCTGTTGGAATAAGGATCTAACTAATATCTATTGTCATTTTTCACACCAATACTACGCTTTATTCCTTCTAGACGTTCTAGTCAGGCAGTATAGTTACATTGAATTACTTAATAATTATCACAAAGGCATGAAATTCAAAACTATACTGTTCTGATAATCAGCATATTCTAGCTTCTGATTACTGATACTGAGTCTCATCATAACTTATAGCTTGCCTATTTGTCTCCAGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGGCGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCATGCTGTCAAAAAAGGAGATGAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATTTTAATTCTTGCTTGTTCTTGCAAGCCACATCTGTCCTTTCCCACTTGGCAGGACTTAGCATTGAGGAATATTGTGTTGGGTATAAGTATAACTATATCTGCGAGATTATGGTTCTGCTTAAAGGAAACAACTCTAGCATCAAATATGTTGTGCTGCTATGCTAGATTGCTAGGCATGTTAATACGATACCATGCATTGAAACAACTACAGTGTCATTTTTTTTTTTAAAAAAAATGTGACTTCTTATATGGTTGTGTGCACACAACAAACACTACAGAATCCTTGGGAGCTTATAAACTTCTCGAGTGATGCCAAGATTCATCTTGACTCCTTCCTGTCGGTCTTCAACATTGCTGGCTTGCATGATGAGCTCTACCACAATGCTGCATTGACCTCAGGAGAAAACAACTTTGTTGATGGAGGAGTCGTGGCAGCAGCAAGAACTCTGCCGACATGGTCAG-AAGGTGATGTTCCTGCCATACCAAGCTTGGAAAGAAAATCTGCTCAGGCATTACAAGAGGA-ATGCCATACGATGCTGGAGTCCTTTTCAACCACTAT-TCAACAAGACCAGGAGATTCTAGATTCTGATGGACATATCAGAAGAACACGTGAAATCGCAATCAAATATCGGCTACACC-GGAAGCTGCTCCTGCAGAAAATCATCGATGCA-TTGGATATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTATCAATTTCTATAAACTCATATAGTCAAAGATATGTTTGACTTAGGATAAACCTGTAACGGCAAGTAATTTGAGACGGAAAGAGTATGAACCGAAACAACGAGTTTTGAAATGGAACAAAAAAA]

[+] EMBL AK066321             [TATTCTTCCATCGCAGGAGGTGCGCTTCCTATCCCCATCGCCACCCATGGCGACTCCCGCCGCTTCCCCTCTCCTGCTGCCGCTCCCCCTCCCCCTCCCGGCCTCCACCTTCCCGCCTCGCCGCGCCGTTCCCTGCGCCCGCCGCCTCGTCTTGCGGCCTCCCCGCGCCGGACGCCCTCGCCTCCGGGACCCGCCTCCCGCGGCACCCCCACCGGCGGCGGAGGAGGTCGGCGAGGAGGAAGAGGACGACGATGCCCCCCCGCTCAGGCTCCTCGAACCGCCCCAGGAGGACGACCCCTTCCCGCCCGAGATGGAGCCGGCCGACCCCGACTTCTACCGGATAGGGTACGCGCGGATGATGCGGGCGTACGGGGTTGAGTTCTTGGAAGGCCCCGATGGGATGGCCGTCTATGCCTCCCGGGACGTCGACCCACTCCGCAGAGCTAGAGTGATTATGGAGATTCCATTGGAGCTAATGCTGACTATAACTCAAAAACGCCCTTGGATGTTTTTCCCCGACATTATTCCACTAGGCCATCCCATATTTGACATCATTGAATCAACAGATCCTGAGGTAAATGGAGCCCTCTAACCCTCTAATTATGGTATGTTCCAGTGAAGACTGTATGTGCATTCCAGAGTTTGTGTTTTTTAGTTTCTACAGAATCACTTATGAGGAACATTGTGTAATTAAGATTCAATAGCGCTTTGACTGCCCATTCCATCTACTATGAAAATAAGCTGTTATATTGGATAAAAGGGATGGTATTACTCAACACTTGCAACCTGTTTTCTTCCTTCATGCGGTGTCAAAGCTTCATAAGTGATGTAGACTGCATCCTAACGCAATCTGTACCCTCTTGCAGACAGATTGGGATCTAAGGTTAGCTTGCCTTCTTCTCTATGCATTTGATGTAGAAGACAACTTTTGGCAGCTATATGGTGATTTTTTGCCTAGTGTTGATGAATGCACTAGCTTGCTTTTGGCACCAAAGGTATTGTAAATCTAAACAAAATGAATTGTAGTCTTCTTAAACCTGACAATACAGTTTGAATGAATTTACATGCCTGGCTTGCCAGGACGATCTAATGGAACTAGAAGACCAAGATCTTGCCACGAAAATGTTAAAGAACCAGAAGAGAGCAATTGATTTTTGGCAAAAACATTGGGTACACTTCTGTACTATTTGATCAACTTCGCTGGCTTGGGTACATCTAACACTAGCTTGATGGGTAATGTCCAGCATAAAACAATCCCTCTAAAGCTAAAGCGTCTTGCCCCTGACCATGAAAGATTTCTATGGGCACTGAGTATTGTTCAGTCTCGCTCTGTCAATTTGAAACTGAGAATGGGAGCCTTCCTCCAAGATGCAAATGTCCTAGTGCCGTATGCTGGTACATGTTTTCTTATCTGTTCCCCTTTATGCTCTTTATTTTTATTTTCAGTGTGTATTAAGCACCGATTACTAAAATTAAGAATAAAATCACTTAGTTTCTTCAGCTTGCGATGATAATCAGATGTCTAACAGTCTAAGTCAAGGCTGCGGTCTGAGGGATCTTTTGCTCCATTTATTTTGAGCTGGCGAATGCTATAAAGGTTTTTATAATGTTATAGCGCTAATGTTACTTGCACAGTAAATCATAGTTACCAACTGATCCAAGATATTATATTTTCTAATATCAGCACTACTTCTGTATGGTTAAACTCTGTTGGAATAAGGATCTAACTAATATCTATTGTCATTTTTCACACCAATACTACGCTTTATTCCTTCTAGACGTTCTAGTCAGGCAGTATAGTTACATTGAATTACTTAATAATTATCACAAAGGCATGAAATTCAAAACTATACTGTTCTGATAATCAGCATATTCTAGCTTCTGATTACTGATACTGAGTCTCATCATAACTTATAGCTTGCCTATTTGTCTCCAGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGGCGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCATGCTGTCAAAAAAGGAGATGAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATTTTAATTCTTGCTTGTTCTTGCAAGCCACATCTGTCCTTTCCCACTTGGCAGGACTTAGCATTGAGGAATATTGTGTTGGGTATAAGTATAACTATATCTGCGAGATTATGGTTCTGCTTAAAGGAAACAACTCTAGCATCAAATATGTTGTGCTGCTATGCTAGATTGCTAGGCATGTTAATACGATACCATGCATTGAAACAACTACAGTGTCATTTTTTTTTTTAAAAAAAATGTGACTTCTTATATGGTTGTGTGCACACAACAAACACTACAGAATCCTTGGGAGCTTATAAACTTCTCGAGTGATGCCAAGATTCATCTTGACTCCTTCCTGTCGGTCTTCAACATTGCTGGCTTGCATGATGAGCTCTACCACAATGCTGCATTGACCTCAGGAGAAAACAACTTTGTTGATGGAGGAGTCGTGGCAGCAGCAAGAACTCTGCCGACATGGTCAG AAGGTGATGTTCCTGCCATACCAAGCTTGGAAAGAAAATCTGCTCAGGCATTACAAGAGGA ATGCCATACGATGCTGGAGTCCTTTTCAACCACTAT TCAACAAGACCAGGAGATTCTAGATTCTGATGGACATATCAGAAGAACACGTGAAATCGCAATCAAATATCGGCTACACC GGAAGCTGCTCCTGCAGAAAATCATCGATGCA TTGGATATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTATCAATTTCTATAAAC                                                                                                            ]
[+] EMBL BI807714             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CAAG ACTCT CCGACATGGTCAGAAAGTTGATGTTCCT CCATACCAAGCTTGGAAAGAAAATCTGCTCAGGCATTACAAGAGGATATGCCATACGATGCTGGAGTCCTTTTCAACCACTATGTCAACAAGACCAGGAGATTCTAGATTCTGATGGACATATCAGAAGAACACGTGAAATCGC ATCAAATATCGGCTACACCGGGAAGCTGCTCCTGCAGAAAATCATCGATGCACTTGGATATCTACCAGGATAAAATTTTGTTTTAGATA CTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATA CAGTACAGTGAAATAAAGAC GTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAAaaaaaa                                                                                                                                                                       ]
[+] EMBL OSC12301A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             AGATTCTGATGGACATATCAGAAGAACACGTGAAATCGCAATCAAATATCGGCTACACC GGAAGCTGCTCCTGCAGAAAATCATCGATGCA TTGGATATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAA                                                                                                                                                                                                      ]
[+] EMBL BI804840             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTATCAATTTCTATAAACTCATATAGTCAAAGATATGTTTGACTTAGGATAAACCTGTAACGGCAAGTAATTTGAGACGGAAAGAGTATGAACCGAAACAACGAGTTTTGAAATGGAACAAAAAAA]




>consensus_9536#0
TATTCTTCCATCGCAGGAGGTGCGCTTCCTATCCCCATCGCCACCCATGGCGACTCCCGC
CGCTTCCCCTCTCCTGCTGCCGCTCCCCCTCCCCCTCCCGGCCTCCACCTTCCCGCCTCG
CCGCGCCGTTCCCTGCGCCCGCCGCCTCGTCTTGCGGCCTCCCCGCGCCGGACGCCCTCG
CCTCCGGGACCCGCCTCCCGCGGCACCCCCACCGGCGGCGGAGGAGGTCGGCGAGGAGGA
AGAGGACGACGATGCCCCCCCGCTCAGGCTCCTCGAACCGCCCCAGGAGGACGACCCCTT
CCCGCCCGAGATGGAGCCGGCCGACCCCGACTTCTACCGGATAGGGTACGCGCGGATGAT
GCGGGCGTACGGGGTTGAGTTCTTGGAAGGCCCCGATGGGATGGCCGTCTATGCCTCCCG
GGACGTCGACCCACTCCGCAGAGCTAGAGTGATTATGGAGATTCCATTGGAGCTAATGCT
GACTATAACTCAAAAACGCCCTTGGATGTTTTTCCCCGACATTATTCCACTAGGCCATCC
CATATTTGACATCATTGAATCAACAGATCCTGAGGTAAATGGAGCCCTCTAACCCTCTAA
TTATGGTATGTTCCAGTGAAGACTGTATGTGCATTCCAGAGTTTGTGTTTTTTAGTTTCT
ACAGAATCACTTATGAGGAACATTGTGTAATTAAGATTCAATAGCGCTTTGACTGCCCAT
TCCATCTACTATGAAAATAAGCTGTTATATTGGATAAAAGGGATGGTATTACTCAACACT
TGCAACCTGTTTTCTTCCTTCATGCGGTGTCAAAGCTTCATAAGTGATGTAGACTGCATC
CTAACGCAATCTGTACCCTCTTGCAGACAGATTGGGATCTAAGGTTAGCTTGCCTTCTTC
TCTATGCATTTGATGTAGAAGACAACTTTTGGCAGCTATATGGTGATTTTTTGCCTAGTG
TTGATGAATGCACTAGCTTGCTTTTGGCACCAAAGGTATTGTAAATCTAAACAAAATGAA
TTGTAGTCTTCTTAAACCTGACAATACAGTTTGAATGAATTTACATGCCTGGCTTGCCAG
GACGATCTAATGGAACTAGAAGACCAAGATCTTGCCACGAAAATGTTAAAGAACCAGAAG
AGAGCAATTGATTTTTGGCAAAAACATTGGGTACACTTCTGTACTATTTGATCAACTTCG
CTGGCTTGGGTACATCTAACACTAGCTTGATGGGTAATGTCCAGCATAAAACAATCCCTC
TAAAGCTAAAGCGTCTTGCCCCTGACCATGAAAGATTTCTATGGGCACTGAGTATTGTTC
AGTCTCGCTCTGTCAATTTGAAACTGAGAATGGGAGCCTTCCTCCAAGATGCAAATGTCC
TAGTGCCGTATGCTGGTACATGTTTTCTTATCTGTTCCCCTTTATGCTCTTTATTTTTAT
TTTCAGTGTGTATTAAGCACCGATTACTAAAATTAAGAATAAAATCACTTAGTTTCTTCA
GCTTGCGATGATAATCAGATGTCTAACAGTCTAAGTCAAGGCTGCGGTCTGAGGGATCTT
TTGCTCCATTTATTTTGAGCTGGCGAATGCTATAAAGGTTTTTATAATGTTATAGCGCTA
ATGTTACTTGCACAGTAAATCATAGTTACCAACTGATCCAAGATATTATATTTTCTAATA
TCAGCACTACTTCTGTATGGTTAAACTCTGTTGGAATAAGGATCTAACTAATATCTATTG
TCATTTTTCACACCAATACTACGCTTTATTCCTTCTAGACGTTCTAGTCAGGCAGTATAG
TTACATTGAATTACTTAATAATTATCACAAAGGCATGAAATTCAAAACTATACTGTTCTG
ATAATCAGCATATTCTAGCTTCTGATTACTGATACTGAGTCTCATCATAACTTATAGCTT
GCCTATTTGTCTCCAGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGG
CGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCATGCTGTCAAAAAAGGA
GATGAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGT
TTCTCATCACCAACGGTATGATCATGTGTTTGATTTTAATTCTTGCTTGTTCTTGCAAGC
CACATCTGTCCTTTCCCACTTGGCAGGACTTAGCATTGAGGAATATTGTGTTGGGTATAA
GTATAACTATATCTGCGAGATTATGGTTCTGCTTAAAGGAAACAACTCTAGCATCAAATA
TGTTGTGCTGCTATGCTAGATTGCTAGGCATGTTAATACGATACCATGCATTGAAACAAC
TACAGTGTCATTTTTTTTTTTAAAAAAAATGTGACTTCTTATATGGTTGTGTGCACACAA
CAAACACTACAGAATCCTTGGGAGCTTATAAACTTCTCGAGTGATGCCAAGATTCATCTT
GACTCCTTCCTGTCGGTCTTCAACATTGCTGGCTTGCATGATGAGCTCTACCACAATGCT
GCATTGACCTCAGGAGAAAACAACTTTGTTGATGGAGGAGTCGTGGCAGCAGCAAGAACT
CTGCCGACATGGTCAGAAGGTGATGTTCCTGCCATACCAAGCTTGGAAAGAAAATCTGCT
CAGGCATTACAAGAGGAATGCCATACGATGCTGGAGTCCTTTTCAACCACTATTCAACAA
GACCAGGAGATTCTAGATTCTGATGGACATATCAGAAGAACACGTGAAATCGCAATCAAA
TATCGGCTACACCGGAAGCTGCTCCTGCAGAAAATCATCGATGCATTGGATATCTACCAG
GATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTT
TGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAA
CAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTG
AAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAA
GTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAAT
ATTTGACTATCAATTTCTATAAACTCATATAGTCAAAGATATGTTTGACTTAGGATAAAC
CTGTAACGGCAAGTAATTTGAGACGGAAAGAGTATGAACCGAAACAACGAGTTTTGAAAT
GGAACAAAAAAA

consensusID : consensus_9536#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 435
fasta sequence 
                              [GCCTTCCTCCAAGATGCAAATGTCCTAGTGCCGTATGCTGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGGCGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCGTGCTGTCAAAAAAGGAGATGAGGTACTGTTTAGAGCTTAGAGTACAATTAGCTTCCTTGTGAGCAAAGAGCGACTAGTTTAATGTTATATTATAATTAAAAATTCCTTATTTGCATGGAAAGTTGCCAACTTTACTTAAATGCCATCCAAAATTTCAAACCAGTTTGATCATTTCATTCTATGGACCCAGTACAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATTTNNNNNCTNGCNNGTTCTTGCAA]

[+] EMBL CF197106             [GCCTTCCTCCAAGATGCAAATGTCCTAGTGCCGTATGCTGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGGCGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCGTGCTGTCAAAAAAGGAGATGAGGTACTGTTTAGAGCTTAGAGTACAATTAGCTTCCTTGTGAGCAAAGAGCGACTAGTTTAATGTTATATTATAATTAAAAATTCCTTATTTGCATGGAAAGTTGCCAACTTTACTTAAATGCCATCCAAAATTTCAAACCAGTTTGATCATTTCATTCTATGGACCCAGTACAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATTTNNNNNCTNGCNNGTTCTTGCAA]




>consensus_9536#1
GCCTTCCTCCAAGATGCAAATGTCCTAGTGCCGTATGCTGATATGCTGAATCATTCACCT
GATGCTAATTGTTTCCTGCATTGGCGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAG
GCTGGGCGTGCTGTCAAAAAAGGAGATGAGGTACTGTTTAGAGCTTAGAGTACAATTAGC
TTCCTTGTGAGCAAAGAGCGACTAGTTTAATGTTATATTATAATTAAAAATTCCTTATTT
GCATGGAAAGTTGCCAACTTTACTTAAATGCCATCCAAAATTTCAAACCAGTTTGATCAT
TTCATTCTATGGACCCAGTACAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCAT
TTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATTTNNNNNCT
NGCNNGTTCTTGCAA

consensusID : consensus_9536#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 434
fasta sequence 
                              [ATGGNCATATTCAGAAGAACCACGTGAAANCGCAATCAAATACCGGCTACNCCGGAAGCTGCTCCCTGCAGAAAATCCATCCGATGCATTGGATATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU091642             [ATGGNCATATTCAGAAGAACCACGTGAAANCGCAATCAAATACCGGCTACNCCGGAAGCTGCTCCCTGCAGAAAATCCATCCGATGCATTGGATATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCTCATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9536#2
ATGGNCATATTCAGAAGAACCACGTGAAANCGCAATCAAATACCGGCTACNCCGGAAGCT
GCTCCCTGCAGAAAATCCATCCGATGCATTGGATATCTACCAGGATAAAATTTTGTTTTA
GATAGCTGTATAGGCAACAACTAGTTGAGCTCCAGTGCTAGTTTGCTAAGCGCTGGAGTG
TCTTTAGATGATTTTGTGAAGGGGGTTTCACTCACATCTGTAACAGTAGGGATTTCACCT
CATTCTTTTAGATATTTCCACTTTGGTAGATAGCAGTATAGTGAAATAAAGACAGTGCCC
ATGAGGTAGTGTAGTTTCCAGCCAGTGACCTGCAGAAAATCAAGTAATCCCTCTGTTTCG
AACTACTTGTGTTCTAGTTTTGTCCTAAGGTAAACATTTTAATATTTGACTAAAAAAAAA
AAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9536#0      TATTCTTCCATCGCAGGAGGTGCGCTTCCTATCCCCATCGCCACCCATGGCGACTCCCGC 60
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CGCTTCCCCTCTCCTGCTGCCGCTCCCCCTCCCCCTCCCGGCCTCCACCTTCCCGCCTCG 120
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CCGCGCCGTTCCCTGCGCCCGCCGCCTCGTCTTGCGGCCTCCCCGCGCCGGACGCCCTCG 180
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CCTCCGGGACCCGCCTCCCGCGGCACCCCCACCGGCGGCGGAGGAGGTCGGCGAGGAGGA 240
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      AGAGGACGACGATGCCCCCCCGCTCAGGCTCCTCGAACCGCCCCAGGAGGACGACCCCTT 300
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CCCGCCCGAGATGGAGCCGGCCGACCCCGACTTCTACCGGATAGGGTACGCGCGGATGAT 360
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GCGGGCGTACGGGGTTGAGTTCTTGGAAGGCCCCGATGGGATGGCCGTCTATGCCTCCCG 420
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GGACGTCGACCCACTCCGCAGAGCTAGAGTGATTATGGAGATTCCATTGGAGCTAATGCT 480
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GACTATAACTCAAAAACGCCCTTGGATGTTTTTCCCCGACATTATTCCACTAGGCCATCC 540
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CATATTTGACATCATTGAATCAACAGATCCTGAGGTAAATGGAGCCCTCTAACCCTCTAA 600
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTATGGTATGTTCCAGTGAAGACTGTATGTGCATTCCAGAGTTTGTGTTTTTTAGTTTCT 660
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      ACAGAATCACTTATGAGGAACATTGTGTAATTAAGATTCAATAGCGCTTTGACTGCCCAT 720
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TCCATCTACTATGAAAATAAGCTGTTATATTGGATAAAAGGGATGGTATTACTCAACACT 780
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TGCAACCTGTTTTCTTCCTTCATGCGGTGTCAAAGCTTCATAAGTGATGTAGACTGCATC 840
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CTAACGCAATCTGTACCCTCTTGCAGACAGATTGGGATCTAAGGTTAGCTTGCCTTCTTC 900
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TCTATGCATTTGATGTAGAAGACAACTTTTGGCAGCTATATGGTGATTTTTTGCCTAGTG 960
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTGATGAATGCACTAGCTTGCTTTTGGCACCAAAGGTATTGTAAATCTAAACAAAATGAA 1020
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTGTAGTCTTCTTAAACCTGACAATACAGTTTGAATGAATTTACATGCCTGGCTTGCCAG 1080
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GACGATCTAATGGAACTAGAAGACCAAGATCTTGCCACGAAAATGTTAAAGAACCAGAAG 1140
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      AGAGCAATTGATTTTTGGCAAAAACATTGGGTACACTTCTGTACTATTTGATCAACTTCG 1200
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CTGGCTTGGGTACATCTAACACTAGCTTGATGGGTAATGTCCAGCATAAAACAATCCCTC 1260
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TAAAGCTAAAGCGTCTTGCCCCTGACCATGAAAGATTTCTATGGGCACTGAGTATTGTTC 1320
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      AGTCTCGCTCTGTCAATTTGAAACTGAGAATGGGAGCCTTCCTCCAAGATGCAAATGTCC 1380
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TAGTGCCGTATGCTGGTACATGTTTTCTTATCTGTTCCCCTTTATGCTCTTTATTTTTAT 1440
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTTCAGTGTGTATTAAGCACCGATTACTAAAATTAAGAATAAAATCACTTAGTTTCTTCA 1500
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GCTTGCGATGATAATCAGATGTCTAACAGTCTAAGTCAAGGCTGCGGTCTGAGGGATCTT 1560
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTGCTCCATTTATTTTGAGCTGGCGAATGCTATAAAGGTTTTTATAATGTTATAGCGCTA 1620
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      ATGTTACTTGCACAGTAAATCATAGTTACCAACTGATCCAAGATATTATATTTTCTAATA 1680
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TCAGCACTACTTCTGTATGGTTAAACTCTGTTGGAATAAGGATCTAACTAATATCTATTG 1740
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TCATTTTTCACACCAATACTACGCTTTATTCCTTCTAGACGTTCTAGTCAGGCAGTATAG 1800
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTACATTGAATTACTTAATAATTATCACAAAGGCATGAAATTCAAAACTATACTGTTCTG 1860
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      ATAATCAGCATATTCTAGCTTCTGATTACTGATACTGAGTCTCATCATAACTTATAGCTT 1920
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GCCTATTTGTCTCCAGATATGCTGAATCATTCACCTGATGCTAATTGTTTCCTGCATTGG 1980
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CGTTTCAAAGATCGTATGGTTGAAGTCATGATTAAGGCTGGGCATGCTGTCAAAAAAGGA 2040
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GATGAGATGACAATTGATTATATGAGTGGAGTGAACAGCTCATTTATGGAAAGATATGGT 2100
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TTCTCATCACCAACGGTATGATCATGTGTTTGATTTTAATTCTTGCTTGTTCTTGCAAGC 2160
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CACATCTGTCCTTTCCCACTTGGCAGGACTTAGCATTGAGGAATATTGTGTTGGGTATAA 2220
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GTATAACTATATCTGCGAGATTATGGTTCTGCTTAAAGGAAACAACTCTAGCATCAAATA 2280
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TGTTGTGCTGCTATGCTAGATTGCTAGGCATGTTAATACGATACCATGCATTGAAACAAC 2340
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      TACAGTGTCATTTTTTTTTTTAAAAAAAATGTGACTTCTTATATGGTTGTGTGCACACAA 2400
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CAAACACTACAGAATCCTTGGGAGCTTATAAACTTCTCGAGTGATGCCAAGATTCATCTT 2460
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GACTCCTTCCTGTCGGTCTTCAACATTGCTGGCTTGCATGATGAGCTCTACCACAATGCT 2520
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GCATTGACCTCAGGAGAAAACAACTTTGTTGATGGAGGAGTCGTGGCAGCAGCAAGAACT 2580
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CTGCCGACATGGTCAGAAGGTGATGTTCCTGCCATACCAAGCTTGGAAAGAAAATCTGCT 2640
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      CAGGCATTACAAGAGGAATGCCATACGATGCTGGAGTCCTTTTCAACCACTATTCAACAA 2700
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------GCCTTCCTCCAA 12
                                                                                  

consensus_9536#0      GACCAGGAGATTCTAGATTCTGATGGACATAT-CAGAAGAAC--ACGTGA----AATCGC 2753
consensus_9536#2      ----------------------ATGGNCATATTCAGAAGAACC-ACGTGA----AANCGC 33
consensus_9536#1      GATGCAAATGTCCTAGTGCCGTATGCTGATATGCTGAATCATTCACCTGATGCTAATTGT 72
                                            ***   **** * ***  *   ** ***    **  * 

consensus_9536#0      AATCAAATATCGGCTACACCGGAAGCTGCTCC-TGCAGAAAATCA--TCGATGCATTGGA 2810
consensus_9536#2      AATCAAATACCGGCTACNCCGGAAGCTGCTCCCTGCAGAAAATCCATCCGATGCATTGGA 93
consensus_9536#1      T-TCCTGCATTGGC-GTTTCAAAGATCGTATGGTTGAAGTCATGA--TTAAGGCTGGGCG 128
                        **    *  ***     *  *    *     *  *    **       * **   *  

consensus_9536#0      TATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCC 2870
consensus_9536#2      TATCTACCAGGATAAAATTTTGTTTTAGATAGCTGTATAGGCAACAACTAGTTGAGCTCC 153
consensus_9536#1      TGCTGTCAAAAAAGGAGATGAGGTACTGTTTAGAGCTTAGAGTACAATTAGCT------- 181
                      *     * *  *   *  *  * *   * *    *  ***   **** *** *       

consensus_9536#0      AGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACT- 2929
consensus_9536#2      AGTGCTAGTTTGCTAAGCGCTGGAGTGTCTTTAGATGATTTTGTGAAGGGGGTTTCACT- 212
consensus_9536#1      --TCCTTGTGAGCAAAGAGC--GACTAGTTTAATGTTATATTATAATTAAAAATTCCTTA 237
                        * ** **  ** *** **  ** *   ** *  * ** ** * *       ***  * 

consensus_9536#0      CACATCTGTAACAGTAGGGATTTCACCTCATT-CTTTTAGATATTTCCACTTTGGTAGAT 2988
consensus_9536#2      CACATCTGTAACAGTAGGGATTTCACCTCATT-CTTTTAGATATTTCCACTTTGGTAGAT 271
consensus_9536#1      TTTGCATGGAAAGTTGCCAACTTTACTTAAATGCCATCCAAAATTTCAAACCAGTTTGAT 297
                            ** **   *    * ** ** * * * *  *   * ***** *    * * ***

consensus_9536#0      AGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCT 3048
consensus_9536#2      AGCAGTATAGTGAAATAAAGACAGTGCCCATGAGGTAGTGTAGTTTCCAGCCAGTGACCT 331
consensus_9536#1      CATTTCATTCT---ATGGACCCAGTACAGATGACAATTGATTATATGAGTGGAGTGAACA 354
                            **  *   **  *  **** *  ****       *  * *      ***** * 

consensus_9536#0      GCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGT 3108
consensus_9536#2      GCAGAAAATCAAGTAATCCCTCTGTTTCGAACTACTTGTGTTCTAGTTTTGTCCTAAGGT 391
consensus_9536#1      GCTCAT--TTATGGAAAGATATGGTTTCTCATCACCAACGGTATGATCATGTGTTTGATT 412
                      **  *   * * * **       *****  *  **    * * *  *  ***  *    *

consensus_9536#0      AAACATTTTAATATTTGACTATCAATTTCTATAAACTCATATAGTCAAAGATATGTTTGA 3168
consensus_9536#2      AAACATTTTAATATTTGACTAAAAAAAAAAAAAAAAAAAAAAA----------------- 434
consensus_9536#1      TNNNNNCTNGCNNGTT--CTTGCAA----------------------------------- 435
                             *      **  **   **                                   

consensus_9536#0      CTTAGGATAAACCTGTAACGGCAAGTAATTTGAGACGGAAAGAGTATGAACCGAAACAAC 3228
consensus_9536#2      ------------------------------------------------------------
consensus_9536#1      ------------------------------------------------------------
                                                                                  

consensus_9536#0      GAGTTTTGAAATGGAACAAAAAAA 3252
consensus_9536#2      ------------------------
consensus_9536#1      ------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)