These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9538#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1356 fasta sequence [CCATTAAGGTAATCAATCAACCATGGCGCCCTCCCGCCCGCTCATGCGCGGGATCCGCCCGCCGCGCGTCTTCCCCACCCGCGGCGGCCGCACCTCGCCCTTGGCCCTCGCCCTCGCCGCCCTCCTCCTCGCCTCCGCCTTGCTCCTCGCCCTCATCGCCTTCGGCGTCTTCTCCCTCCCGGTCTCCGCCCCCAACGCCGCCACCACCGACTCCGCCGCCGCCGGGGGAGACGCCGAGCCCGCCGATCCACGGCCCCCGCGCACCCGCGCCCGCCGCGACCTTAGCGAGGGCCTTGGGGAACGAGGAGCACAATGGACGGAAGTCATATCATGGGAGCCCAGGGCTTTCGTCTATCACAATTTCCTGTCCAAGGAAGAGTGTGATTACTTGATTGGATTGGCCAAGCCTCACATGGTCAAATCCACGGTTGTTGATAGCACTACTGGTAAAAGCAAGGACAGCAGGGTACGCACAAGTTC-AGGCATG-TTTCTCC-AAAGGGGACGAGACAAGGTTATTCGGGCCATTGAAAAGAGGATAGCAGACTACAC-TTTCATTCCTATGGAA-CATGGA-GAGGGACTCCAAGTTC-TGCACTATGAAGTCGGGCAGAAGTACGAGCCTCACTTTGACTATTTTCTTGATGAGTACAACACCAAGAATGGTGGTCAGAGAATGGCTACTCTTCTGATGTATCTATCTGATGTTGAAGAAGGGGGTGAGACTATTTTCCCTGATGCAAATGTGAACAGCAGTTCATTACCATGGTATAATGAACTTTCAGAGTGTGCCAGAAAGGGCCTTGCTGTCAAACCAAAGATGGGAGATGCGCTTCTTTTTTGGAGCATGAAACCAGATGCCACTCTAGACCCTTTAAGTTTGCATGGGGGTTGTCCTGTCATCAAAGGAAACAAATGGTCATCAACCAAGTGGATGCATGTCCGTGAGTACAAAGCTTGAGCTTTCTGAAGTCGTGATTACCAAAGATGGACCCTATATAAAGCATTGACTGGGGCACTTTCCAGGATGGCAGTTATGTAGGCTTTAGAGATCCACACCGGTGGTATTCTTTGCTCTCTGAGAATATATAGTAGAGGCACTAAGCAAGGGGGTTTACTTGTCCATACCGTGTTTTTGGAGATGGTCTTGTTGAACCTGGCGCCTTTTCTTCTTTATTTTTTCTGGCAGACTACAGAGGAATGAATGGTCCATTGTTGGGGACATAGGGTGTGGCGTTTGATTTAGTTTGTTTTGTGGTGTATTGCTATCTGCTAATGTTAGTAGCTTAATTATGTACACTGTTGAGCTAAGTTGTCATTACTATAGAGCTCTCTCCTATACATGAGGGGAGGTGACAAAAA] [+] EMBL CA754786 [CCATTAAGGTAATCAATCAACCATGGCGCCCTCCCGCCCGCTCATGCGCGGGATCCGCCCGCCGCGCGTCTTCCCCACCCGCGGCGGCCGCACCTCGCCCTTGGCCCTCGCCCTCGCCGCCCTCCTCCTCGCCTCCGCCTTGCTCCTCGCCCTCATCGCCTTCGGCGTCTTCTCCCTCCCGGTCTCCGCCCCCAACGCCGCCACCACCGACTCCGCCGCCGCCGGGGGAGACGCCGAGCCCGCCGATCCACGGCCCCCGCGCACCCGCGCCCGCCGCGACCTTAGCGAGGGCCTTGGGGAACGAGGAGCACAATGGACGGAAGTCATATCATGGGAGCCCAGGGCTTTCGTCTATCACAATTTCCTGTCCAAGGAAGAGTGTGATTACTTGATTGGATTGGCCAAGCCTCACATGGTCAAATCCACGGTTGTTGATAGCACTACTGGTAAAAGCAAGGACAGCAGGGTACGCACAAGTTC AGGCATG TTTCTCC AAAGGGGACGAGACAAGGTTATTCGGGCCATTGAAAAGAGGATAGCAGACTACAC TGTCATTCCTATGGAA CATGGA AAGGGACTCCNAGTTC TGCACTATGAAATCGGGC ] [+] EMBL OSC103751 [ TGGACGGAAGTCATATCATGGGAGCCCAGGGCTTTCGTCTATCACAATTTCCTGTCCAAGGAAGAGTGTGATTACTTGATTGGATTGGCCAAGCCTCACATGGTCAAATCCACGGTTGTTGATAGCACTACTGGTAAAAGCAAGGACAGCAGGGTACGCACAAGTTCAAGGCATGTTTTCTCCAAAAGGGGACGAGACAAGGTTATTCGGGCCATTGAAAANAGGATAGCAGACTACACTTTTCATTCCTATGGAACCATGGAGGATGGACTCCAAGTTCTTGCACTATGAAGTCG ] [+] EMBL CB096348 [ GCCATTGAAAAGAGGATAGCAGACTACAC TTTCATACCTATGGAA CATGGA GAGGGACTCCAAGTTC TGCACTATGAAGTCGGGCAGAAGTACGAGCCTCACTTTGACTATTTTCTTGATGAGTACAACACCAAGAATGGTGGTCAGAGAATGGCTACTCTTCTGATGTATCTATCTGATGTTGAAGAAGGGGGTGAGACTATTTTCCCTGATGCAAATGTGAACAGCAGTTCATTACCATGGTATAATGAACTTTCAGAGTGTGCCAGAAAGGGCCTTGCTGTCAAACCAAAGATGGGAGATGCGCTTCTTTTTTGGAGCATGAAACCAGATGCCACTCTAGACCCTTTAAGTTTGCATGGGGGTTGTCCTGTCATCAAAGGAAACAAATGGTCATCAACCAAGTGGATGCATGTCCGTGAGTACAAAGCTTGAGCTTTCTGAAGTCGTGATTGCCAAAGATGGACCCTATATAAAGCATTGACTGGGGCACTTTCCAGGATGGCAGTTATGTAGGCTTTAGAGATCCACACCGGTGGTATTCTTTGCTCTCTGAGAATATATAGTAGAGGCACTAAGCAAGGGGGTTTACTTGTCCATACCGTGTTTTTGGAGATGGTCTTGNTGAACCTGGCGCCTTTTCTTCTTTATTTTTTCTGGCAGACTACAGAGGAATGAATGGTCCATTGNTGGGGACATANGGTGGGGCGGTTGANTTAG TTGGTTTGGGGGGGATTGCTATCTGCTAAGGTagg ] [+] EMBL CA767111 [ CCATTGAAAAGAGGATAGCAGACTACAC TTTCATTCCTATGGAA CATGGA GAGGGACTCCAAGTTC TGCACTATGAAGTCGGGCAGAAGTACGAGCCTCACTTTGACTATTTTCTTGATGAGTACAACACCAAGAATGGTGGTCAGAGAATGGCTACTCTTCTGATGTATCTATCTGATGTTGAAGAAGGGGGTGAGACTATTTTCCCTGATGCAAATGTGAACAGCAGTTCATTACCATGGTATAATGAACTTTCAGAGTGCGCCAGAAAGGGCCTTGCTGTCAAACCAAAGATGGGAGATGCGCTTCTTTTTTGGAGCATGAAACCAGATGCCACTCTAGACCCTTTAAGTTTGCATGGGGGTTGTCCTGTCATCAAAGGAAACAAATGGTCATCAACCAAG ] [+] EMBL AU092064 [ gnTGGTCAGAGAATGGCTACTCTTCTGATGTATCTATCTGATGTTGAAGAAGGGGGTGAGACTATTTTCCCTGATGCAAATGTGAACAGCAGTTCATTACCATGGTATAATGAACTTTCAGAGTGTGCCAGAAAGGGCCTTGCTGTCAAACCAAAGATGGGAGATGCGCTTCTTTTTTGGAGCATGAAACCAGATGCCACTCTAGACCCTTTAAGTTTGCATGGGGGTTGTCCTGTCATCAAAGGAAACAAATGGTCATCAACCAAGTGGATGCATGTCCGTGAGTACAAAGCTTGAGCTTTCTGAAGTCGTGATTACCAAAGATGGACCCTATATAAAGCATTGACTGGGGCACTTTCCAGGATGGCAGTTATGTAGGCTTTAGAGATCCACACCGGTGGTATTCTTTGCTCTCTGAGAATATATAGTAGAGGCACTAAGCAAGGGGGTTTACTTGTCCATACCGTGTTTTTGGAGATGGTCTTGTTGAACCTGGCGCCTTTTCTTCTTTATTTTTTCTGGCAGACTACAGAGGAATGAATGGTCCATTGTTGGGGACATAGGGTGTGGCGTTTGATTTAGTTTGTTTTGTGGTGTATTGCTATCTGCTAATGTTAGTAGCTTAATTATGTACACTGTTGAGCTAAGTTGTCATTACTATAGAGCTCTCTCCTATACATGAGGGGAGGTGACAAAAA] [+] EMBL AK058935 [ CATGAAACCAGATGCCACTCTAGACCCTTTAAGTTTGCATGGGGGTTGTCCTGTCATCAAAGGAAACAAATGGTCATCAACCAAGTGGATGCATGTCCGTGAGTACAAAGCTTGAGCTTTCTGAAGTCGTGATTACCAAAGATGGACCCTATATAAAGCATTGACTGGGGCACTTTCCAGGATGGCAGTTATGTAGGCTTTAGAGATCCACACCGGTGGTATTCTTTGCTCTCTGAGAATATATAGTAGAGGCACTAAGCAAGGGGGTTTACTTGTCCATACCGTGTTTTTGGAGATGGTCTTGTTGAACCTGGCGCCTTTTCTTCTTTATTTTTTCTGGCAGACTACAGAGGAATGAATGGTCCATTGTTGGGGACATAGGGTGTGGCGTTTGATTTAGTTTGTTTTGTGGTGTATTGCTATCTGCTAATGTTAGTAGCTTAATTATGTACACTGTTGAGCTAAGTTGTCATTACTATAGAGCTCTCTCCTATACATGAGGGG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||