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Oryza sativa
cluster # 954 cluster # 954       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_954#0 length = 1721 sequences # 2  

consensusID : consensus_954#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1721
fasta sequence
                              [GGGGGTGGGGTGGTACGGAAACCCTATCACCAGGGAAGAGGGGGGCGGGGGCGCACAGCAAATTTCCTCCTAATCCGTTTCTCCCTTGGGCGATGGCTTCCATCGCTATGGCTGCCTCGTTGCGAACCTTCCTCCGCCCTCACCGTTGCCGTCTCCTCCTCCGCCAGAGCCGCAGCCTCTCCGCCAGCGCCGCCCCGGCCGGTGCCGCCGCCGCATCCACGGTTATCCGGCGCAGCGTAGTGGAGGTGCTCCGGGAGCGGGGGCTCGTGGAGGCCACCACTTCTGAGTCTCTGGGGTCGGCTTCAGCGAGCCCTAGGGAGCTCAAGGCGTACTGCGGCTTCGACCCCACGGCGGAGAGCCTCCACCTCGGGAACCTCCTCGGGCTCGTCGTGCTCTCCTGGTTCCGCCGCTGCGGTCACAACGCCGTCGCGCTCGTCGGCGGCGCCACCGGCCGTGTCGGTGACCCCTCTGGAAAGAGCGCCGAGCGGCCCGAGCTCGACCTCGCCGCCGTCGAGACCAACTCCAACGCTATCAAATCGCTCATCGGCCAGATCCTTGACCGTGCACCCGAGCCCTCCCAACATTCGCAATCCGGTAAAAACTTGAACTTGGAGCAAAATGAGCAGGCTTTGGTCAATTCGGGAGAAAAGATGGGTTCTTTTCAGATCCTTGATAACTATGACTGGTGGAAGGACATCACGCTGCTGGATTTCCTCAAGGAGGTGGGGAGATTCGCTCGTGTTGGGACGATGATAGCCAAGGAGAGTGTCAAGAAGCGGCTTATGTCCGAGGACGGAATGAGCTACACTGAGTTCACCTACCAGCTGTTGCAGGGCTATGACTTCCTGTACATGTTCCGCAATATGGGTGTTAATGTGCAGATTGGAGGAAGTGATCAGTGGGGAAACATCACAGCGGGGACTGAGTTAATTCGGAAGATTTTACAGGTTGAGGGGGCACACGGCCTGACATTCCCACTACTGCTGAAGAGTGATGGGACGAAGTTTGGCAAGACGGAGGATGGAGCAATCTGGCTTTCGCCCAAGATGTTGTCACCATACAAATTCTATCAGTACTTCTTCTCAGTGCCAGATATTGATGTCATAAGGTTTATGAAGATACTGACATTCATGAGCCTGGATGAGATTCAGGAGCTGGAAGAGTCGATGAAGAAGCCTGGCTATGTGCCGAACACAATTCAGAGGAGGCTTGCAGAAGAGGTCACACGTTTTGTGCATGGTGAGGAGGGATTGGAGGAAGCGTTGAAAGCCACGGAAGCCTTACGGCCTGGGGCACAGACTCAGTTGGATTCACAAACAATTGAGGGGATAGCAGATGACGTACCATCATGCTTTTTGCCATATGGCCAAGTTTTGAAGTCTCCCCTGGTTGATCTAGCAGTCTCCACAGGTTTGCTTGCTAGCAAATCAGCGGTTAGGCGGCTTATTAAGCAAGGGGGGCTATACTTAAATAACATAAGAATTGATAGCGAGGATAAGTTGGTTGAGGAAGGTGATGTAGTTGATGGGAAAGTGCTGTTGCTATCTGCTGGAAAGAAGAACAAGATGGTTGTGAGGATATCTTGATTGTTTTAATTTGTTCGTTGCATTTAAATTTTTTTATCATTGAGGAGCAAAGGAATGAGACGAAGTCTTGTATTAAGAATTTAAGATTAATTTTGATGAACATCGGCATTAATTTTAATGCCACTTTACTGGAAT]

[+] EMBL AK066713             [GGGGGTGGGGTGGTACGGAAACCCTATCACCAGGGAAGAGGGGGGCGGGGGCGCACAGCAAATTTCCTCCTAATCCGTTTCTCCCTTGGGCGATGGCTTCCATCGCTATGGCTGCCTCGTTGCGAACCTTCCTCCGCCCTCACCGTTGCCGTCTCCTCCTCCGCCAGAGCCGCAGCCTCTCCGCCAGCGCCGCCCCGGCCGGTGCCGCCGCCGCATCCACGGTTATCCGGCGCAGCGTAGTGGAGGTGCTCCGGGAGCGGGGGCTCGTGGAGGCCACCACTTCTGAGTCTCTGGGGTCGGCTTCAGCGAGCCCTAGGGAGCTCAAGGCGTACTGCGGCTTCGACCCCACGGCGGAGAGCCTCCACCTCGGGAACCTCCTCGGGCTCGTCGTGCTCTCCTGGTTCCGCCGCTGCGGTCACAACGCCGTCGCGCTCGTCGGCGGCGCCACCGGCCGTGTCGGTGACCCCTCTGGAAAGAGCGCCGAGCGGCCCGAGCTCGACCTCGCCGCCGTCGAGACCAACTCCAACGCTATCAAATCGCTCATCGGCCAGATCCTTGACCGTGCACCCGAGCCCTCCCAACATTCGCAATCCGGTAAAAACTTGAACTTGGAGCAAAATGAGCAGGCTTTGGTCAATTCGGGAGAAAAGATGGGTTCTTTTCAGATCCTTGATAACTATGACTGGTGGAAGGACATCACGCTGCTGGATTTCCTCAAGGAGGTGGGGAGATTCGCTCGTGTTGGGACGATGATAGCCAAGGAGAGTGTCAAGAAGCGGCTTATGTCCGAGGACGGAATGAGCTACACTGAGTTCACCTACCAGCTGTTGCAGGGCTATGACTTCCTGTACATGTTCCGCAATATGGGTGTTAATGTGCAGATTGGAGGAAGTGATCAGTGGGGAAACATCACAGCGGGGACTGAGTTAATTCGGAAGATTTTACAGGTTGAGGGGGCACACGGCCTGACATTCCCACTACTGCTGAAGAGTGATGGGACGAAGTTTGGCAAGACGGAGGATGGAGCAATCTGGCTTTCGCCCAAGATGTTGTCACCATACAAATTCTATCAGTACTTCTTCTCAGTGCCAGATATTGATGTCATAAGGTTTATGAAGATACTGACATTCATGAGCCTGGATGAGATTCAGGAGCTGGAAGAGTCGATGAAGAAGCCTGGCTATGTGCCGAACACAATTCAGAGGAGGCTTGCAGAAGAGGTCACACGTTTTGTGCATGGTGAGGAGGGATTGGAGGAAGCGTTGAAAGCCACGGAAGCCTTACGGCCTGGGGCACAGACTCAGTTGGATTCACAAACAATTGAGGGGATAGCAGATGACGTACCATCATGCTTTTTGCCATATGGCCAAGTTTTGAAGTCTCCCCTGGTTGATCTAGCAGTCTCCACAGGTTTGCTTGCTAGCAAATCAGCGGTTAGGCGGCTTATTAAGCAAGGGGGGCTATACTTAAATAACATAAGAATTGATAGCGAGGATAAGTTGGTTGAGGAAGGTGATGTAGTTGATGGGAAAGTGCTGTTGCTATCTGCTGGAAAGAAGAACAAGATGGTTGTGAGGATATCTTGATTGTTTTAATTTGTTCGTTGCATTTAAATTTTTTTATCATTGAGGAGCAAAGGAATGAGACGAAGTCTTGTATTAAGAATTTAAGATTAATTTTGATGAACATCGGCATTAATTTTAATGCCACTTTACTGGAAT]
[+] EMBL CB646126             [ GGGGTCGTGTGGTACGGAAACCCTATCACCAGGGAAGAGGGGGGCGGGGGCGCACAGCAAATTTCCTCCTAATCCGTTTCTCCCTTGGGCGATGGCTTCCATCGCTATGGCTGCCTCGTTGCGAACCTTCCTCCGCCCTCACCGTTGCCGTCTCCTCCTCCGCCAGAGCCGCAGCCTCTCCGCCAGCGCCGCCCCGGCCGGTGCCGCCGCCGCATCCACGGTTATCCGGCGCAGCGTAGTGGAGGTGCTCCGGGAGCGGGGGCTCGTGGAGGCCACCACTTCTGAGTCTCTGGGGTCGGCTTCAGCGAGCCCTAGGGAGCTCAAGGCGTACTGCGGCTTCGACCCCACGGCGGAGAGCCTCCACCTCGGGAACCTCCTCGGGCTCGTCGTGCTCTCCTGGTTCCGCCGCTGCGGTCACAACGCCGTCGCGCTCGTCGGCGGCGCCACCGGCCGTGTCGGTGACCCCTCTGGAAAGAGCGCCGAGCGGCCCGAGCTCGACCTCGCCGCCGTCGAGACCAACTCCAACGCTATCAAATCGCTCATCGGCCAGATCCTTGACCGTGCACCCGAGCCCTCCCAACATTCGCAATCCGGTAAAAACTTGAACTTGGAGCAAAATGAGCAGGCTTTGGTCAATTCGGGAGAAAAGATGGGTTCTTTTCAGATCCTTGATAACTATGACTGGTGGAAGGACATCACGCTGCTGGATTTCCTCAAGGAGGTGGGGAGATTCCCTCGTGTTGGGACGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]


>consensus_954#0 GGGGGTGGGGTGGTACGGAAACCCTATCACCAGGGAAGAGGGGGGCGGGGGCGCACAGCA AATTTCCTCCTAATCCGTTTCTCCCTTGGGCGATGGCTTCCATCGCTATGGCTGCCTCGT TGCGAACCTTCCTCCGCCCTCACCGTTGCCGTCTCCTCCTCCGCCAGAGCCGCAGCCTCT CCGCCAGCGCCGCCCCGGCCGGTGCCGCCGCCGCATCCACGGTTATCCGGCGCAGCGTAG TGGAGGTGCTCCGGGAGCGGGGGCTCGTGGAGGCCACCACTTCTGAGTCTCTGGGGTCGG CTTCAGCGAGCCCTAGGGAGCTCAAGGCGTACTGCGGCTTCGACCCCACGGCGGAGAGCC TCCACCTCGGGAACCTCCTCGGGCTCGTCGTGCTCTCCTGGTTCCGCCGCTGCGGTCACA ACGCCGTCGCGCTCGTCGGCGGCGCCACCGGCCGTGTCGGTGACCCCTCTGGAAAGAGCG CCGAGCGGCCCGAGCTCGACCTCGCCGCCGTCGAGACCAACTCCAACGCTATCAAATCGC TCATCGGCCAGATCCTTGACCGTGCACCCGAGCCCTCCCAACATTCGCAATCCGGTAAAA ACTTGAACTTGGAGCAAAATGAGCAGGCTTTGGTCAATTCGGGAGAAAAGATGGGTTCTT TTCAGATCCTTGATAACTATGACTGGTGGAAGGACATCACGCTGCTGGATTTCCTCAAGG AGGTGGGGAGATTCGCTCGTGTTGGGACGATGATAGCCAAGGAGAGTGTCAAGAAGCGGC TTATGTCCGAGGACGGAATGAGCTACACTGAGTTCACCTACCAGCTGTTGCAGGGCTATG ACTTCCTGTACATGTTCCGCAATATGGGTGTTAATGTGCAGATTGGAGGAAGTGATCAGT GGGGAAACATCACAGCGGGGACTGAGTTAATTCGGAAGATTTTACAGGTTGAGGGGGCAC ACGGCCTGACATTCCCACTACTGCTGAAGAGTGATGGGACGAAGTTTGGCAAGACGGAGG ATGGAGCAATCTGGCTTTCGCCCAAGATGTTGTCACCATACAAATTCTATCAGTACTTCT TCTCAGTGCCAGATATTGATGTCATAAGGTTTATGAAGATACTGACATTCATGAGCCTGG ATGAGATTCAGGAGCTGGAAGAGTCGATGAAGAAGCCTGGCTATGTGCCGAACACAATTC AGAGGAGGCTTGCAGAAGAGGTCACACGTTTTGTGCATGGTGAGGAGGGATTGGAGGAAG CGTTGAAAGCCACGGAAGCCTTACGGCCTGGGGCACAGACTCAGTTGGATTCACAAACAA TTGAGGGGATAGCAGATGACGTACCATCATGCTTTTTGCCATATGGCCAAGTTTTGAAGT CTCCCCTGGTTGATCTAGCAGTCTCCACAGGTTTGCTTGCTAGCAAATCAGCGGTTAGGC GGCTTATTAAGCAAGGGGGGCTATACTTAAATAACATAAGAATTGATAGCGAGGATAAGT TGGTTGAGGAAGGTGATGTAGTTGATGGGAAAGTGCTGTTGCTATCTGCTGGAAAGAAGA ACAAGATGGTTGTGAGGATATCTTGATTGTTTTAATTTGTTCGTTGCATTTAAATTTTTT TATCATTGAGGAGCAAAGGAATGAGACGAAGTCTTGTATTAAGAATTTAAGATTAATTTT GATGAACATCGGCATTAATTTTAATGCCACTTTACTGGAAT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)