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Oryza sativa
cluster # 9543 cluster # 9543       Sequences # 6       consensus # 5


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9543#0 length = 808 sequences # 1  
consensus_9543#1 length = 679 sequences # 1  
consensus_9543#2 length = 571 sequences # 2  
consensus_9543#3 length = 525 sequences # 1  
consensus_9543#4 length = 264 sequences # 1  

consensusID : consensus_9543#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 808
fasta sequence
                              [AAGGGGGGTAGCCTTTGATGTGAAGAAACAACCAACAAACACAAGAGAGGGAGAGGAGAGTGGAGAAGAAGAAGTGCAACNTTGTTCAGCTCGAGGCTCTTACCCGATCTTCATCAAGTCAGCGATTAGAGGCTCAAACGTGGTTGGATTGGCACCAAACTTGGTGAGTTTGTTCCTCACTTTGAGCACTTTAATCTGGCCAGTTTGGATGAGAATTGTTTGAGTAGAGCACCGGATTTGAGTAGTGGTTTATCAACTCGAGTTACTGAAATTACAGATTGTGCAACAATTAGTAAAGTGTCAGTTTGAGGGGTCAAACGGTGTCCGATTAAGCTGTTTTTTGGATAGCTTGGAAGGGACTCATAGACCATCATTTCTGCCATGTTTCATCAATTTGCATATGTGGTTTGAGAGATCTCAGCTGAGAACCGAAGAGGACAAAATCTGCCATTNCTCTGCTTGTTTGATGATATACCTCTTGTTAGCTTTGATGGTTGATGTTGATGATGCCAAGTGTGTAACTTGATGCTGTAGNTGCTATTGAGATGTGCCTCTANATGTTCTAGAGAAGACTCCAATTGTACCCATTGTTGATTATAGNGGAAGCTTGGAGTGGACCGTTGGTCCCGNAGTTTTTTACTCACATCGAGGAGGTTTNTTCCACGTNAATCACCATATTCTTGNGTGTATGNGTTTTATTGNCTATTTGCATTGTTTGATTTGGCTAGNTNGAAAACTATCCTCNAAAGTTCANGGCAAGATGATGGGNNTGATTCGNGCCGAAANACGTTTTGNCCGGCTTAGGNGA]

[+] EMBL CA765031             [AAGGGGGGTAGCCTTTGATGTGAAGAAACAACCAACAAACACAAGAGAGGGAGAGGAGAGTGGAGAAGAAGAAGTGCAACNTTGTTCAGCTCGAGGCTCTTACCCGATCTTCATCAAGTCAGCGATTAGAGGCTCAAACGTGGTTGGATTGGCACCAAACTTGGTGAGTTTGTTCCTCACTTTGAGCACTTTAATCTGGCCAGTTTGGATGAGAATTGTTTGAGTAGAGCACCGGATTTGAGTAGTGGTTTATCAACTCGAGTTACTGAAATTACAGATTGTGCAACAATTAGTAAAGTGTCAGTTTGAGGGGTCAAACGGTGTCCGATTAAGCTGTTTTTTGGATAGCTTGGAAGGGACTCATAGACCATCATTTCTGCCATGTTTCATCAATTTGCATATGTGGTTTGAGAGATCTCAGCTGAGAACCGAAGAGGACAAAATCTGCCATTNCTCTGCTTGTTTGATGATATACCTCTTGTTAGCTTTGATGGTTGATGTTGATGATGCCAAGTGTGTAACTTGATGCTGTAGNTGCTATTGAGATGTGCCTCTANATGTTCTAGAGAAGACTCCAATTGTACCCATTGTTGATTATAGNGGAAGCTTGGAGTGGACCGTTGGTCCCGNAGTTTTTTACTCACATCGAGGAGGTTTNTTCCACGTNAATCACCATATTCTTGNGTGTATGNGTTTTATTGNCTATTTGCATTGTTTGATTTGGCTAGNTNGAAAACTATCCTCNAAAGTTCANGGCAAGATGATGGGNNTGATTCGNGCCGAAANACGTTTTGNCCGGCTTAGGNGA]


>consensus_9543#0 AAGGGGGGTAGCCTTTGATGTGAAGAAACAACCAACAAACACAAGAGAGGGAGAGGAGAG TGGAGAAGAAGAAGTGCAACNTTGTTCAGCTCGAGGCTCTTACCCGATCTTCATCAAGTC AGCGATTAGAGGCTCAAACGTGGTTGGATTGGCACCAAACTTGGTGAGTTTGTTCCTCAC TTTGAGCACTTTAATCTGGCCAGTTTGGATGAGAATTGTTTGAGTAGAGCACCGGATTTG AGTAGTGGTTTATCAACTCGAGTTACTGAAATTACAGATTGTGCAACAATTAGTAAAGTG TCAGTTTGAGGGGTCAAACGGTGTCCGATTAAGCTGTTTTTTGGATAGCTTGGAAGGGAC TCATAGACCATCATTTCTGCCATGTTTCATCAATTTGCATATGTGGTTTGAGAGATCTCA GCTGAGAACCGAAGAGGACAAAATCTGCCATTNCTCTGCTTGTTTGATGATATACCTCTT GTTAGCTTTGATGGTTGATGTTGATGATGCCAAGTGTGTAACTTGATGCTGTAGNTGCTA TTGAGATGTGCCTCTANATGTTCTAGAGAAGACTCCAATTGTACCCATTGTTGATTATAG NGGAAGCTTGGAGTGGACCGTTGGTCCCGNAGTTTTTTACTCACATCGAGGAGGTTTNTT CCACGTNAATCACCATATTCTTGNGTGTATGNGTTTTATTGNCTATTTGCATTGTTTGAT TTGGCTAGNTNGAAAACTATCCTCNAAAGTTCANGGCAAGATGATGGGNNTGATTCGNGC CGAAANACGTTTTGNCCGGCTTAGGNGA



consensusID : consensus_9543#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 679
fasta sequence
                              [TTTTTTTTTTTTTTTAATTAAGATGGACTTCATCAGCTAATTAAAAGAAATATAATAAAGTATACGGCACCTTTGTCTAATCCTGATCTTAAGTGTTACTTATCAATTTAATTAGTAGACCTGCTTCCTCATAACATAAACAAGATACAGATCATTCAAGTCGGCAGCTCCACGTGCATAGAGCCAACCTGAATTAATTAACTTATTCTTCTTCTTGACCACAATATCAGCAGCATCACAGTATGTTTGCTGACACCATGGAAAAACACCAGCAGCTAGCCCTTTTGATCCCTCGCTCTTGCCATTTTTCATGACTGAAGTACAGGAACCAACCTAATATTTATTAAACTGTCGGTTGTAATATTTGTGTCCCTGCATGCGAATCAGCGCGCAGTGGTGGATGGCATCTGGGTCACCACCGGAGTCGACAGCGATGCGTTCCAGCTCCAGGACTGGCGCCAGTGTCCACATCATTATCCCGTCCACCTTAGCCTCCCGCGCTGTAGCCTTCCACAAGAACCTTTGGTTGCGGCGGCCATTGGGAGTGGGAGGACCGTGTGTTNGGACTGAACCAAAACACCAAGTTTGGTGCCAATCCAACCACGTTTGAGCCTCTAATCGCTGACTTGATGAAGATCGGGTAAGAGCCTCGAGCCTGACAAGCTGCACTTCTTCTTCT]

[+] EMBL CA761895             [TTTTTTTTTTTTTTTAATTAAGATGGACTTCATCAGCTAATTAAAAGAAATATAATAAAGTATACGGCACCTTTGTCTAATCCTGATCTTAAGTGTTACTTATCAATTTAATTAGTAGACCTGCTTCCTCATAACATAAACAAGATACAGATCATTCAAGTCGGCAGCTCCACGTGCATAGAGCCAACCTGAATTAATTAACTTATTCTTCTTCTTGACCACAATATCAGCAGCATCACAGTATGTTTGCTGACACCATGGAAAAACACCAGCAGCTAGCCCTTTTGATCCCTCGCTCTTGCCATTTTTCATGACTGAAGTACAGGAACCAACCTAATATTTATTAAACTGTCGGTTGTAATATTTGTGTCCCTGCATGCGAATCAGCGCGCAGTGGTGGATGGCATCTGGGTCACCACCGGAGTCGACAGCGATGCGTTCCAGCTCCAGGACTGGCGCCAGTGTCCACATCATTATCCCGTCCACCTTAGCCTCCCGCGCTGTAGCCTTCCACAAGAACCTTTGGTTGCGGCGGCCATTGGGAGTGGGAGGACCGTGTGTTNGGACTGAACCAAAACACCAAGTTTGGTGCCAATCCAACCACGTTTGAGCCTCTAATCGCTGACTTGATGAAGATCGGGTAAGAGCCTCGAGCCTGACAAGCTGCACTTCTTCTTCT]


>consensus_9543#1 TTTTTTTTTTTTTTTAATTAAGATGGACTTCATCAGCTAATTAAAAGAAATATAATAAAG TATACGGCACCTTTGTCTAATCCTGATCTTAAGTGTTACTTATCAATTTAATTAGTAGAC CTGCTTCCTCATAACATAAACAAGATACAGATCATTCAAGTCGGCAGCTCCACGTGCATA GAGCCAACCTGAATTAATTAACTTATTCTTCTTCTTGACCACAATATCAGCAGCATCACA GTATGTTTGCTGACACCATGGAAAAACACCAGCAGCTAGCCCTTTTGATCCCTCGCTCTT GCCATTTTTCATGACTGAAGTACAGGAACCAACCTAATATTTATTAAACTGTCGGTTGTA ATATTTGTGTCCCTGCATGCGAATCAGCGCGCAGTGGTGGATGGCATCTGGGTCACCACC GGAGTCGACAGCGATGCGTTCCAGCTCCAGGACTGGCGCCAGTGTCCACATCATTATCCC GTCCACCTTAGCCTCCCGCGCTGTAGCCTTCCACAAGAACCTTTGGTTGCGGCGGCCATT GGGAGTGGGAGGACCGTGTGTTNGGACTGAACCAAAACACCAAGTTTGGTGCCAATCCAA CCACGTTTGAGCCTCTAATCGCTGACTTGATGAAGATCGGGTAAGAGCCTCGAGCCTGAC AAGCTGCACTTCTTCTTCT



consensusID : consensus_9543#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 571
fasta sequence
                              [AGATTTTNAGTTTGGTGACTCTAACCCGGTCTTCATCAAGTCAGCGATTGGAAGGTCAAACGTGCTTGGTTCAATACCAAACTTGGTGAGTTTATTTCTCACTTGGTGAACTTCAATCTGGCCAGTTTTGGTGGGAATTGGTTGAGTAGAGCATCAGATTTGGGTATGGTTTCTTCAGCTCGAGTAACCGCAGTTTCAGCGTGTACAGTCTGTGGTAGAATGTCAGTTTGAGGGGTCAAACGGTGTCTGATTGGGCTGGTTTTTGGATAGCTTGGAAGGGACTTATAGACCATCATTTCTGCCAAGTTTCGTGCAATTTGTAATGATTTTGGGAGATCTCAAGTTANAACCGAAGTGGACAGAATCTGTCATTTCTCTGCTTGTTGTTGTTATACCTCTTGTTAGTTGCTATGGTTGTTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATTTGTACCCATTGTTGATTATAGTGGAAGTTTGGAGTGGACCGTTGGTCCCGTGGTTTTTTACTCCTCACACCGAGGAGGTTTTTCTACATAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL C27908               [AGATTTTNAGTTTGGTGACTCTAACCCGGTCTTCATCAAGTCAGCGATTGGAAGGTCAAACGTGCTTGGTTCAATACCAAACTTGGTGAGTTTATTTCTCACTTGGTGAACTTCAATCTGGCCAGTTTTGGTGGGAATTGGTTGAGTAGAGCATCAGATTTGGGTATGGTTTCTTCAGCTCGAGTAACCGCAGTTTCAGCGTGTACAGTCTGTGGTAGAATGTCAGTTTGAGGGGTCAAACGGTGTCTGATTGGGCTGGTTTTTGGATAGCTTGGAAGGGACTTATAGACCATCATTTCTGCCAAGTTTCGTGCAATTTGTAATGATTTTGGGAGATCTCAAGTTAN                                                                                                                                                                                                                                ]
[+] EMBL AU092757             [ GATTTTCAGTTTGGTGACTCTAACCCGGTCTTCATCAAGTCAGCGATTGGAAGGTCAAACGTGCTTGGATCAATACCAAACTTGGTGAGTTTATTTCTCACTTGGTGAACTTCAATCTGGCCAGTTTTGGTGGGAATTGGTTGAGTAGAGCATCAGATTTGGGTATGGTTTCTTCAGCTCGAGTAACCGCAGTTTCAGCGTGTACAGTCTGTGGTAGAATGTCAGTTTGAGGGGTCAAACGGTGTCTGATTGGGCTGGTTTTTGGATAGCTTGGAAGGGACTTATAGACCATCATTTCTGCCAAGTTTCGTGCAATTTGT ATGA TTTGGGAGATCTCAGCTAAGAACCGAAGTGGACAGAATCTGTCATTTCTCTGCTTGTTGTTGTTATACCTCTTGTTAGTTGCTATGGTTGTTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATTTGTACCCATTGTTGATTATAGTGGAAGTTTGGAGTGGACCGTTGGTCCCGTGGTTTTTTACTCCTCACACCGAGGAGGTTTTTCTACATAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9543#2 AGATTTTNAGTTTGGTGACTCTAACCCGGTCTTCATCAAGTCAGCGATTGGAAGGTCAAA CGTGCTTGGTTCAATACCAAACTTGGTGAGTTTATTTCTCACTTGGTGAACTTCAATCTG GCCAGTTTTGGTGGGAATTGGTTGAGTAGAGCATCAGATTTGGGTATGGTTTCTTCAGCT CGAGTAACCGCAGTTTCAGCGTGTACAGTCTGTGGTAGAATGTCAGTTTGAGGGGTCAAA CGGTGTCTGATTGGGCTGGTTTTTGGATAGCTTGGAAGGGACTTATAGACCATCATTTCT GCCAAGTTTCGTGCAATTTGTAATGATTTTGGGAGATCTCAAGTTANAACCGAAGTGGAC AGAATCTGTCATTTCTCTGCTTGTTGTTGTTATACCTCTTGTTAGTTGCTATGGTTGTTG TTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATTTGTACCCATTGTTGATTATAG TGGAAGTTTGGAGTGGACCGTTGGTCCCGTGGTTTTTTACTCCTCACACCGAGGAGGTTT TTCTACATAAAAAAAAAAAAAAAAAAAAAAA



consensusID : consensus_9543#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 525
fasta sequence
                              [ATTATTGGATTAGACCTTCGAATTTGATTGTGTTTTTCAGCTCGATCACTAAAATCCAGATTGCCAAATAGTTAATAAAGTGTCGGCTTTAAAGGTCAAACCGGTGTCCGATTAGCCTGTTTTTTGACAGCTTGGAAGGGAATCATAGACCATCATTTCTCCAAGTTTCGTGCAACTGTGGTTTGGAGATCTCAGCTGAGAACCGAAAAGGACAGAATCTGCTATTTCTCTACTTGTTAGTTGATATACCTCTTGTTAGCTTTGATGGTTGAGATGTTGATAATCCCATGTAACTTGATGTTGTACCTGTTGTGATGTGTCTTTAGATATTATAGAGAAGACTACATTTGTACCCATTGTTGATTATAGTGGAAGCTTGGAGTGGACCGTTGGTCCCGTGTTTTTTACTCCTCACACCGAGGAGGTTTTTCCACGTAAATCACTGGTGTCTTGTGTCCATGTTTTATTGTTATTCCGCTACTGATTTGTTAAGTTGAAACTATCCTCAAAGTTCATCCCAAAAAA]

[+] EMBL BI799604             [ATTATTGGATTAGACCTTCGAATTTGATTGTGTTTTTCAGCTCGATCACTAAAATCCAGATTGCCAAATAGTTAATAAAGTGTCGGCTTTAAAGGTCAAACCGGTGTCCGATTAGCCTGTTTTTTGACAGCTTGGAAGGGAATCATAGACCATCATTTCTCCAAGTTTCGTGCAACTGTGGTTTGGAGATCTCAGCTGAGAACCGAAAAGGACAGAATCTGCTATTTCTCTACTTGTTAGTTGATATACCTCTTGTTAGCTTTGATGGTTGAGATGTTGATAATCCCATGTAACTTGATGTTGTACCTGTTGTGATGTGTCTTTAGATATTATAGAGAAGACTACATTTGTACCCATTGTTGATTATAGTGGAAGCTTGGAGTGGACCGTTGGTCCCGTGTTTTTTACTCCTCACACCGAGGAGGTTTTTCCACGTAAATCACTGGTGTCTTGTGTCCATGTTTTATTGTTATTCCGCTACTGATTTGTTAAGTTGAAACTATCCTCAAAGTTCATCCCAAAAAA]


>consensus_9543#3 ATTATTGGATTAGACCTTCGAATTTGATTGTGTTTTTCAGCTCGATCACTAAAATCCAGA TTGCCAAATAGTTAATAAAGTGTCGGCTTTAAAGGTCAAACCGGTGTCCGATTAGCCTGT TTTTTGACAGCTTGGAAGGGAATCATAGACCATCATTTCTCCAAGTTTCGTGCAACTGTG GTTTGGAGATCTCAGCTGAGAACCGAAAAGGACAGAATCTGCTATTTCTCTACTTGTTAG TTGATATACCTCTTGTTAGCTTTGATGGTTGAGATGTTGATAATCCCATGTAACTTGATG TTGTACCTGTTGTGATGTGTCTTTAGATATTATAGAGAAGACTACATTTGTACCCATTGT TGATTATAGTGGAAGCTTGGAGTGGACCGTTGGTCCCGTGTTTTTTACTCCTCACACCGA GGAGGTTTTTCCACGTAAATCACTGGTGTCTTGTGTCCATGTTTTATTGTTATTCCGCTA CTGATTTGTTAAGTTGAAACTATCCTCAAAGTTCATCCCAAAAAA



consensusID : consensus_9543#4
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 264
fasta sequence
                              [TTTTTGGATATCTTGGAAGGGACTCATAGACCATCATTTTTGCCAAGTTTAGTGCAATTTGCATCTGTGGTTTGGGAGATCTCATCTGAGAACCGAAAAGGACATAATCCGCTATTTCTTTGCTTATTTGTTGATATATTTCTTGTTAGCTTTGATGGTTGATGTTGATGATGCCAAATGTGTAACTTGATGTTATAGCTGCTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATATGTACCCATTGTTGATTATGG]

[-] EMBL AU165164             [TTTTTGGATATCTTGGAAGGGACTCATAGACCATCATTTTTGCCAAGTTTAGTGCAATTTGCATCTGTGGTTTGGGAGATCTCATCTGAGAACCGAAAAGGACATAATCCGCTATTTCTTTGCTTATTTGTTGATATATTTCTTGTTAGCTTTGATGGTTGATGTTGATGATGCCAAATGTGTAACTTGATGTTATAGCTGCTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATATGTACCCATTGTTGATTATGG]


>consensus_9543#4 TTTTTGGATATCTTGGAAGGGACTCATAGACCATCATTTTTGCCAAGTTTAGTGCAATTT GCATCTGTGGTTTGGGAGATCTCATCTGAGAACCGAAAAGGACATAATCCGCTATTTCTT TGCTTATTTGTTGATATATTTCTTGTTAGCTTTGATGGTTGATGTTGATGATGCCAAATG TGTAACTTGATGTTATAGCTGCTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCC ATATGTACCCATTGTTGATTATGG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9543#3      ------------------------------------------------------------
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      AAGGGGGGTAGCCTTTGATGTGAAGAAACAACCAACAAACACAAGAGAGGGAGAGGAGAG 60
consensus_9543#2      ------------------------------------------------------------
consensus_9543#1      ------------------------------------------------------------
                                                                                  

consensus_9543#3      ------------------------------------------------------------
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      TGGAGAAGAAGAAGTGCAACNTTGTTCAGCTCGAGGCTCTTACCCGATCTTCATCAAGTC 120
consensus_9543#2      ------------------AGATTTTNAGTTTGGTGACTCTAACCCGGTCTTCATCAAGTC 42
consensus_9543#1      ---------------------TTTTTTTTTTTTTTTAATTAAGATGGACTTCATCAGCT- 38
                                                                                  

consensus_9543#3      ------------------------------------------------------------
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      AGCGATTAGAGGCTCAAACGTGGTTGGATTGGCACCAAACTTGGTGAGTTTGTTCCTCAC 180
consensus_9543#2      AGCGATTGGAAGGTCAAACGTGCTTGGTTCAATACCAAACTTGGTGAGTTTATTTCTCAC 102
consensus_9543#1      ---AATTAAAAG---AAATATAATAAAGTATACGGCACCTTTGTCTAATCCTGATCTTAA 92
                                                                                  

consensus_9543#3      ----------------------------------ATTATTGGATTAGACCTTCGAATTTG 26
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      TTTGAGCACTTTAATCTGGCCAGTTTGGATGAGAATTGTTTGAGTAGAGCACCGGATTTG 240
consensus_9543#2      TTGGTGAACTTCAATCTGGCCAGTTTTGGTGGGAATTGGTTGAGTAGAGCATCAGATTTG 162
consensus_9543#1      GTGTTACTTATCAATTTAATTAGTAGACCTGCTTCCTCATAACATAAA-CAAGATACAGA 151
                                                                                  

consensus_9543#3      ATTGT--GTTTTTCAGCTCGA-TCACTAAAATC-CAGATTGCCAAATAGTTAATAAAGTG 82
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      AGTAGTGGTTTATCAACTCGAGTTACTGAAATTACAGATTGTGCAACAATTAGTAAAGTG 300
consensus_9543#2      GGTATGGTTTCTTCAGCTCGAGTAACCGCAGTTTCAGCGTGTACAGTCTGTGGTAGAATG 222
consensus_9543#1      TCATTCAAGTCGGCAGCTCCACGTGCATAGAGC---CAACCTGAATTAATTAACTTATTC 208
                                                                                  

consensus_9543#3      TCGGCTTTAAAGGTCAAACCGGTGTCCGATTAGCCTGTTTTTTG-ACAGCTTGGAAGGGA 141
consensus_9543#4      -------------------------------------TTTTTGG-ATATCTTGGAAGGGA 22
consensus_9543#0      TCAGTTTGAGGGGTCAAAC-GGTGTCCGATTAAGCTGTTTTTTGGATAGCTTGGAAGGGA 359
consensus_9543#2      TCAGTTTGAGGGGTCAAAC-GGTGTCTGATTGGGCTGGTTTTTGGATAGCTTGGAAGGGA 281
consensus_9543#1      TTCTTCTTGACCACAATATCAGCAGCATCACAGTATGTTTGCTG-ACACCATGGAAAAAC 267
                                                            **   * * * * *****    

consensus_9543#3      ATCATAGACCATCATTTCT----CCAAGTTTCGTGCAA-------CTGTGGTTTGG-AGA 189
consensus_9543#4      CTCATAGACCATCATTTTTG---CCAAGTTTAGTGCAATTTGCATCTGTGGTTTGGGAGA 79
consensus_9543#0      CTCATAGACCATCATTTCTG---CCATGTTTCAT-CAATTTGCATATGTGGTTTGAGAGA 415
consensus_9543#2      CTTATAGACCATCATTTCTG---CCAAGTTTCGTGCAATTTGTAATGAT--TTTGGGAGA 336
consensus_9543#1      ACCAGCAGCTAGCCCTTTTGATCCCTCGCTCTTGCCATTTTTCATGACTGAAGTACAGGA 327
                         *    * * *  ** *    **  * *     **           *    *    **

consensus_9543#3      TCTCAGCTGAGAACCGA-AAAGGACAGAATCTGCTATTTCTCTACTTGTTAGTTGATATA 248
consensus_9543#4      TCTCATCTGAGAACCGA-AAAGGACATAATCCGCTATTTCTTTGCTTATTTGTTGATATA 138
consensus_9543#0      TCTCAGCTGAGAACCGA-AGAGGACAAAATCTGCCATTNCTCTGCTTGTTTGATGATATA 474
consensus_9543#2      TCTCAAGTTANAACCGA-AGTGGACAGAATCTGTCATTTCTCTGCTTGTT-GTTGTTATA 394
consensus_9543#1      ACCAACCTAATATTTATTAAACTGTCGGTTGTAATATTTGTGTCCCTGCATGCGAATCAG 387
                       *  *  * * *      *          *     ***  * * * *    *    *   

consensus_9543#3      CCTCTTGTTAGCTTTGATGGTTGAGATGTTGATAATCCCA----TGTAACTTGATGTTGT 304
consensus_9543#4      TTTCTTGTTAGCTTTGATGGTTGA--TGTTGATGATGCCAAATGTGTAACTTGATGTTAT 196
consensus_9543#0      CCTCTTGTTAGCTTTGATGGTTGA--TGTTGATGATGCCAAGTGTGTAACTTGATGCTGT 532
consensus_9543#2      CCTCTTGTTAGTTGCTATGGTTGT------------------------------------ 418
consensus_9543#1      CGCGCAGTGGTGGATGGCATCTGGGTCACCACCGGAGTCGACAGCGATGCGTTCCAGCTC 447
                            **             **                                     

consensus_9543#3      ACC---TGTTGTGATGTGTCTTTAGATATTATAGAGAAGACTACATTTGTACCCATTGTT 361
consensus_9543#4      AGCTGCTGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATATGTACCCATTGTT 256
consensus_9543#0      AGNTGCTATTGAGATGTGCCTCTANATGTTCTAGAGAAGACTCCAATTGTACCCATTGTT 592
consensus_9543#2      ------TGTTGTGATGTGCCTCTAGATGTTCTAGAGAAGACTCCATTTGTACCCATTGTT 472
consensus_9543#1      CAGGACTGGCGCCA-GTGTCCACAT-CATTATCCCGTCCACCTTAGCCTCCCGCGCTGTA 505
                            *   *  * *** *   *    ** *   *   **   *      * *  *** 

consensus_9543#3      GA-TTATAGTGGAAGCTTGGAGTG----GACCGTTGGTCCCGTG-TTTTTTACTCCTCAC 415
consensus_9543#4      GA-TTATGG--------------------------------------------------- 264
consensus_9543#0      GA-TTATAGNGGAAGCTTGGAGTG----GACCGTTGGTCCCGNA-GTTTTT--TACTCAC 644
consensus_9543#2      GA-TTATAGTGGAAGTTTGGAGTG----GACCGTTGGTCCCGTGGTTTTTTACTCCTCAC 527
consensus_9543#1      GCCTTCCACAAGAACCTTTGGTTGCGGCGGCCATTGGGAGTGGGAGGACCGTGTGTTNGG 565
                      *  **                                                       

consensus_9543#3      ACCGAGGAGGTTTTT-CCACGTAAATCACTGGTGTCTTGTGTCCATGT--TTTATTGTTA 472
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      ATCGAGGAGGTTTNTTCCACGTNAATCACCATATTCTTGNGTGTATGNGTTTTATTGNCT 704
consensus_9543#2      ACCGAGGAGGTTTTT-CTACATAAAAAAAAAAAAAAAAAAAAAAA--------------- 571
consensus_9543#1      ACTGAACCAAAACAC-CAAGTTTGGTGCCAATCCAACCACGTTTGAGCCTCTAATCGCTG 624
                                                                                  

consensus_9543#3      TTCCGCTAC---TGATTTGTTAAGTTG--AAACTATCCTCAAA-GTTCATCCCAAAAAA- 525
consensus_9543#4      ------------------------------------------------------------
consensus_9543#0      ATTTGCATTGTTTGATTTGGCTAGNTNGAAAACTATCCTCNAAAGTTCANGGCAAGATGA 764
consensus_9543#2      ------------------------------------------------------------
consensus_9543#1      ACTTGATGAAGATCGGGTAAGAGCCTCGAGCCTGACAAGCTGCACTTCTTCTTCT----- 679
                                                                                  

consensus_9543#3      --------------------------------------------
consensus_9543#4      --------------------------------------------
consensus_9543#0      TGGGNNTGATTCGNGCCGAAANACGTTTTGNCCGGCTTAGGNGA 808
consensus_9543#2      --------------------------------------------
consensus_9543#1      --------------------------------------------
                                                                  




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)