cluster # 9549

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9549 cluster # 9549 Sequences # 6 consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9549#0 length = 1532 sequences # 5

consensus_9549#1 length = 1503 sequences # 1

consensusID : consensus_9549#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1532
fasta sequence

                              [TAGTGACAAACGATCGATCGATCCCTCCATCCACAAACCCTCCTCGATCTCATCTTCCTTCGTCTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGCAGCACGAGGGCGATGGCCGGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGG-GGCAGCGGGTGACGTTGCTGGCGATCGACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCCTTCCTCGAGGCCAGGCTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTACTTCGACTGCATCGCCGGGACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCCGGCGACCACGGCCGCCCGCTCTTCGCCGCCAGCGACATCAACCGCTTCTACCTCGACAACGGCCCACTCATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACGAGGCCGAGGTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACGAGGGTGCGCGACACGCTGACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAGCCAACCATCTTCTCCACATACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCCGACATCTGCATCAGCACATCCGCGGCGCCGACCTACCTCCCCGCGCACTGCTTCCAGACCACCGACGACGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCGCCGCCA-ACAACCCGACGATGGTGGCCATGAC-GCAGATCACCAAGAAGATAATGGTGAAGGACAAGGAGGAGCTGTACCCGGTAAAGCCGTCGGACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGCACCGGGTCGACGTCGGACCAGGGGATGTACACGGCGAGGCGGTGCTCGCGGTGGGGGATCGTCCGGTGGCTGCGCAACAAGGGGATGGCGCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCTCGTCGACAT-CCACGCCGCCGTCATTTT-CCAGTCGCTNCACAGCGACGGCGACTACCTCCGCATCCAGGACAACACGC-TCCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAACATGCGGGCGCTCGTCGGGATCGGCG-AGCGGATGCTGGCGCAGCGGGTGTCGAGGGT-CAACGTCGAGACCGG-CAGGTACGT-CGAGGTGCCCGGCG-CCGGCAGCAACGCCGACGCGCTGAAGGGCTTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAA-GCCTGCGGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACGCATCATG-TGACGCGATCTTTTTTATTTTTCTTTTTTTTTTTTTACCTTTCTAGCGGACATGGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTGATCCATTTCTTCAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK069809             [TAGTGACAAACGATCGATCGATCCCTCCATCCACAAACCCTCCTCGATCTCATCTTCCTTCGTCTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGCAGCACGAGGGCGATGGCCGGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGG GGCAGCGGGTGACGTTGCTGGCGATCGACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCCTTCCTCGAGGCCAGGCTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTACTTCGACTGCATCGCCGGGACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCCGGCGACCACGGCCGCCCGCTCTTCGCCGCCAGCGACATCAACCGCTTCTACCTCGACAACGGCCCACTCATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACGAGGCCGAGGTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACGAGGGTGCGCGACACGCTGACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAGCCAACCATCTTCTCCACATACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCCGACATCTGCATCAGCACATCCGCGGCGCCGACCTACCTCCCCGCGCACTGCTTCCAGACCACCGACGACGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCGCCGCCA ACAACCCGACGATGGTGGCCATGAC GCAGATCACCAAGAAGATAATGGTGAAGGACAAGGAGGAGCTGTACCCGGTAAAGCCGTCGGACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGCACCGGGTCGACGTCGGACCAGGGGATGTACACGGCGAGGCGGTGCTCGCGGTGGGGGATCGTCCGGTGGCTGCGCAACAAGGGGATGGCGCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCTCGTCGACAT CCACGCCGCCGTCATGTT CCAGTCGCTGCACAGCGACGGCGACTACCTCCGCATCCAGGACAACACGC TCCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAACATGCGGGCGCTCGTCGGGATCGGCG AGCGGATGCTGGCGCAGCGGGTGTCGAGGGT CAACGTCGAGACCGG CAGGTACGT CGAGGTGCCCGGCG CCGGCAGCAACGCCGACGCGCTGAGGGGCTTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAACGCCTGCGGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACGCATCATGCTGACGCGATCTTTTTTATTTTTCTTTTTTTTTTTTTACCTTTCTAGCGGACATGGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTGATCCA                           ]
[+] EMBL C71772               [                        CTCCATCCACAAACCCTCCTCNATCTNATCTTCCTTCGTNTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCAAGGCGTGCAGCACGAGGGCNATGGCCGGGTGCNTGGTGGGCGAGCCGGCGTCGGCGCCGGNGGCAGCGGGTAACGTTGCTGGCNATCNACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCNTTCCTCGAGGCCAGGCTGCAGGAGCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL C98641               [                                                                                                                                                                                                                                                                                                                                                                                                                                  ACTCATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACGAGGCCGAGGTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACGAGGGTGCGCGACACGCTGACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAGCCAACCATCTTCTCCACATACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCCGACATCTGCATCAGCACATCCGCGGTGCCGACCTACCTCCCCGCGCACTGCTTCCAGACCACCGACGACGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCG CGCCANACAACCCGACGATGGTGGCCATGACGGCAGATCACCAAGAAGATAATGGTGAAGGACAAGGAGGAGCTGTACCCGGTAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[+] EMBL AU093785             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  gtTGCCCCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCTCNTCGACATCCCACGCCCCCNTCATTTTCCCAGTCGCTNCACAGCGACGGCGACTACCTCCGCATCCAGGACAACACGCTTCCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAACATGCGGGCGCTCGTCGGGATCGGCGAAGCGGAATNTGGCGCAGCGGGTNTCGAGGGTCCAACGTCGAGACCGGCCAGGTACGTCCGAGGTGCCCGGCGCCCGGCAGCAACGCCGACGCGCTGNAGGG TTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGNAA TACTGCGGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACGCATCATG TGACGCGATCTTTTTTATTTTTCTTTTTTTTTTTTTACCTTTCTAGCGGACATGGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTGATCCATTTCTTCAAAAAAAAAAAAAAAAAAAA]
[+] EMBL AU101059             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCGGCCAGCTCCGACCTCGTNGACAT CCACGCCGCCTTCATTTT CCAGTCGCTNCACAGCGACGGCNACTACCTCCGCATCCAGGANAACACGC TCCACGGCGACGCCGCCACGGTGGACNCCGCCACCAGGGACAACATGCGGGCGCTCGTCGGGATCGGCG ANCGGAT TTGGCGCAGCGGGTTTCGAGGGT CAACGTCGAGACCGG CAGGTACGT CGAGNTGCCCGGCG CCGGCAGCAACGCCGACGCGCTGAAGGGCTTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAA ACCTGCGGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACGCATCATG TGACGCGATCTTTTTTATTTTNC TTTTTTTTTTTTACCTTTCTAGCGGACATGGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTGATCCATTTCTTCAAAAAAAAAAAAAAAAAAA ]




>consensus_9549#0
TAGTGACAAACGATCGATCGATCCCTCCATCCACAAACCCTCCTCGATCTCATCTTCCTT
CGTCTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGCAGCACGAG
GGCGATGGCCGGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGGGGCAGCGGGTGACGTT
GCTGGCGATCGACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCCTTCCT
CGAGGCCAGGCTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTACTTCGACTG
CATCGCCGGGACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCCGGCGACCA
CGGCCGCCCGCTCTTCGCCGCCAGCGACATCAACCGCTTCTACCTCGACAACGGCCCACT
CATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGCCATGGCGGCGCTGACGAGGCCGAG
GTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAAGATGCTGGGCGAGACGAGGGTGCG
CGACACGCTGACGAACGTCGTCATCCCCACGTTCGACGTCAGGCTGCTCCAGCCAACCAT
CTTCTCCACATACGACGCGAAGAGCATGCCGCTCAAGAACGCGCTCCTCTCCGACATCTG
CATCAGCACATCCGCGGCGCCGACCTACCTCCCCGCGCACTGCTTCCAGACCACCGACGA
CGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGACGGCGGCGTCGCCGCCAACAACCC
GACGATGGTGGCCATGACGCAGATCACCAAGAAGATAATGGTGAAGGACAAGGAGGAGCT
GTACCCGGTAAAGCCGTCGGACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGCACCGGGTC
GACGTCGGACCAGGGGATGTACACGGCGAGGCGGTGCTCGCGGTGGGGGATCGTCCGGTG
GCTGCGCAACAAGGGGATGGCGCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCT
CGTCGACATCCACGCCGCCGTCATTTTCCAGTCGCTNCACAGCGACGGCGACTACCTCCG
CATCCAGGACAACACGCTCCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAA
CATGCGGGCGCTCGTCGGGATCGGCGAGCGGATGCTGGCGCAGCGGGTGTCGAGGGTCAA
CGTCGAGACCGGCAGGTACGTCGAGGTGCCCGGCGCCGGCAGCAACGCCGACGCGCTGAA
GGGCTTCGCCAGGCAGCTCTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAAGCCTGC
GGCGGCGGCGGCGAAGGAGAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACG
CATCATGTGACGCGATCTTTTTTATTTTTCTTTTTTTTTTTTTACCTTTCTAGCGGACAT
GGGGAATAACAAGACGTGACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTG
ATCCATTTCTTCAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_9549#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1503
fasta sequence

                              [TTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCTCGTCTCCTCCCTCGTTGCCGGCGTCTCTACAGTGCCTGCGGCGCCGGCGCAGCTGCGTGCGGCGTCGTCGGCGAGAGGGTGACCGTGCTGACCATCGACGGCGGCGGCATCCGAGGCGTCATCCCGGGCACGGTGCTCGCGTTCCTGGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCGCGAGGCTCGCCGACTACTTCGATGCTGGCTCATCACCGGCGGGCTCATCACCGCGATGCTGGCCGCGCCCGGCGAAGGGGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGCCGCCGCGGACATTACCCCGTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTGGAGCACGCTCGCCGCCAAGATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCTCCGTGGCGTGGTCCGGAGGATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGTCGTCGTCCCCACCTTCGACGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGCGAAGAACTCGCCTCTGAAGAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGCGCCGACGTACCTCCCCGCGCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCGCGAGTACAACCTCATCGACGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGACAATGATCACGGAGGAGATCATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCCGCCGCCGGAGGAGGAGGAGGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCTGACCTCCGACGAGGGCCTCTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTGGCTGCGCCACGGCGGGATGGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCTCGTCGACATCCACGTCGCCGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCGCGTGCAGGCCAACTCGCTGCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAACATGGGGAGCCTCGTCGGCGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAACGTGGAGACCGGGAGGTACGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGCTCGGATCGCCGGGAATCTCTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGTGCAGGCTGGTGTGACTGGGTTTTAGGAGTAGTCATGAAATCCCATCATGTCCCATTGCTCCACGTCTACTGTATTTCCGGGCGGGGGCCATTCCGAATTTCCGGTCGATCATCTCAAAATGTTTTTTCGGTTGAAAAATTCGGTATATGCTGTTAAAAAGTTTAAATAAGGTAAATAAATAATACCAGCTCC]

[+] EMBL AK106375             [TTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCTCGTCTCCTCCCTCGTTGCCGGCGTCTCTACAGTGCCTGCGGCGCCGGCGCAGCTGCGTGCGGCGTCGTCGGCGAGAGGGTGACCGTGCTGACCATCGACGGCGGCGGCATCCGAGGCGTCATCCCGGGCACGGTGCTCGCGTTCCTGGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCGCGAGGCTCGCCGACTACTTCGATGCTGGCTCATCACCGGCGGGCTCATCACCGCGATGCTGGCCGCGCCCGGCGAAGGGGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGCCGCCGCGGACATTACCCCGTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTGGAGCACGCTCGCCGCCAAGATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCTCCGTGGCGTGGTCCGGAGGATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGTCGTCGTCCCCACCTTCGACGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGCGAAGAACTCGCCTCTGAAGAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGCGCCGACGTACCTCCCCGCGCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCGCGAGTACAACCTCATCGACGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGACAATGATCACGGAGGAGATCATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCCGCCGCCGGAGGAGGAGGAGGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCTGACCTCCGACGAGGGCCTCTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTGGCTGCGCCACGGCGGGATGGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCTCGTCGACATCCACGTCGCCGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCGCGTGCAGGCCAACTCGCTGCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAACATGGGGAGCCTCGTCGGCGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAACGTGGAGACCGGGAGGTACGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGCTCGGATCGCCGGGAATCTCTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGTGCAGGCTGGTGTGACTGGGTTTTAGGAGTAGTCATGAAATCCCATCATGTCCCATTGCTCCACGTCTACTGTATTTCCGGGCGGGGGCCATTCCGAATTTCCGGTCGATCATCTCAAAATGTTTTTTCGGTTGAAAAATTCGGTATATGCTGTTAAAAAGTTTAAATAAGGTAAATAAATAATACCAGCTCC]




>consensus_9549#1
TTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCTCGTCTCCTCC
CTCGTTGCCGGCGTCTCTACAGTGCCTGCGGCGCCGGCGCAGCTGCGTGCGGCGTCGTCG
GCGAGAGGGTGACCGTGCTGACCATCGACGGCGGCGGCATCCGAGGCGTCATCCCGGGCA
CGGTGCTCGCGTTCCTGGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCGCGAGGCTCG
CCGACTACTTCGATGCTGGCTCATCACCGGCGGGCTCATCACCGCGATGCTGGCCGCGCC
CGGCGAAGGGGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGCCGCCGCGGA
CATTACCCCGTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTGGAGCACGCT
CGCCGCCAAGATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCTCCGTGGCGT
GGTCCGGAGGATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGTCGTCGTCCC
CACCTTCGACGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGCGAAGAACTC
GCCTCTGAAGAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGCGCCGACGTA
CCTCCCCGCGCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCGCGAGTACAA
CCTCATCGACGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGACAATGATCAC
GGAGGAGATCATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCCGCCGCCGGA
GGAGGAGGAGGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCTGACCTCCGA
CGAGGGCCTCTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTGGCTGCGCCA
CGGCGGGATGGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCTCGTCGACAT
CCACGTCGCCGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCGCGTGCAGGC
CAACTCGCTGCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAACATGGGGAG
CCTCGTCGGCGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAACGTGGAGAC
CGGGAGGTACGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGCTCGGATCGC
CGGGAATCTCTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGTGCAGGCTGG
TGTGACTGGGTTTTAGGAGTAGTCATGAAATCCCATCATGTCCCATTGCTCCACGTCTAC
TGTATTTCCGGGCGGGGGCCATTCCGAATTTCCGGTCGATCATCTCAAAATGTTTTTTCG
GTTGAAAAATTCGGTATATGCTGTTAAAAAGTTTAAATAAGGTAAATAAATAATACCAGC
TCC

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9549#0      TAGTGACAAACGATCGATCGATCCCTCCATCCACAAACCCTCCTCGATCTCATCTTCCTT 60
consensus_9549#1      ----------TTATCAGTCGGATCCATCTCCTACAAATGATGCTTTCCTTCACCTCTGCT 50
                                  ***  ***   **  *  * *****   * **     *** **    *

consensus_9549#0      CGTCTCGTCAATGGCGGCGAGCTACTCGTGCCGGCGGACATGCGAGGCGTGCAGCACGAG 120
consensus_9549#1      CGTCTCCTCCCTCGT-------------TGCCGGCGTCTCTACAGTGCCTGCGGCGCCGG 97
                      ****** **  * *              ********    * *   ** *** ** *  *

consensus_9549#0      GGCGATGGCCGGGTGCGTGGTGGGCGAGCCGGCGTCGGCGCCGGGGCAGCGGGTGACGTT 180
consensus_9549#1      CGC-------AGCTGCGTG----------CGGCGTCGTCGGCG----AGAGGGTGACCGT 136
                       **        * ******          ******** ** **    ** *******  *

consensus_9549#0      GCTGGCGATCGACGGCGGCGGCATCAGGGGCCTCATCCCGGGCACCATCCTCGCCTTCCT 240
consensus_9549#1      GCTGACCATCGACGGCGGCGGCATCCGAGGCGTCATCCCGGGCACGGTGCTCGCGTTCCT 196
                      **** * ****************** * *** *************  * ***** *****

consensus_9549#0      CGAGGCCAGGCTGCAGGAGCTGGATGGCCCCGACGCGCGCCTCGCCGATTACTTCGACTG 300
consensus_9549#1      GGAGGGCGAGCTCCAGCGGCTGGATGGCCCGGGCGCGAGGCTCGCCGACTACTTCGATG- 255
                       **** *  *** ***  ************ * **** * ******** ********   

consensus_9549#0      CATCGCCGGGACCAGCACCGGCGGCCTCATCACCGCCATGCTCGCCGCGCCCGGCGA--- 357
consensus_9549#1      ------CTGGCTCATCACCGGCGGGCTCATCACCGCGATGCTGGCCGCGCCCGGCGAAGG 309
                            * **  ** ********* *********** ***** **************   

consensus_9549#0      ----------------CCACGGCCGC-----CCGCTCTTCGCCGCCAGCGACATCAACCG 396
consensus_9549#1      GGCGGACAGGGACGGGCGGCGGCGGCGGCGGCCGATGTTCGCCGCCGCGGACATTACCCC 369
                                      *  **** **     *** * *********   ***** * ** 

consensus_9549#0      CTTCTACCTCGACAACGGCCCACTCATCTTCCCACAAAAGAGGTGCGGCATGGCGGCGGC 456
consensus_9549#1      GTTCTACCTCGAGCACGGCCCACGCATCTTCCCGCAGCGGTGGAGCACGCTCGCCGCCAA 429
                       ***********  ********* ********* **   * ** **    * ** **   

consensus_9549#0      CATGGCGGCGCTGACGAGGCCGAGGTACAACGGCAAGTACCTGCAGGGGAAGATCAGGAA 516
consensus_9549#1      GATCGCCGCCGCGCGGGGGCCCAAGTATGATGGCCGGTATCTCCGTGGCGTGGTCCGGAG 489
                       ** ** **   *  * **** * ***  * ***  *** ** *  **   * ** *** 

consensus_9549#0      GATGCTGGGCGAGACGAGGGTGCGCGACACGCTGACGAACGTCGTCATCCCCACGTTCGA 576
consensus_9549#1      GATGCTCGGCGAGACGACGGTGGGCGACACGCTCACCAATGTCGTCGTCCCCACCTTCGA 549
                      ****** ********** **** ********** ** ** ****** ******* *****

consensus_9549#0      CGTCAGGCTGCTCCAGCCAACCATCTTCTCCACATACGACGCGAAGAGCATGCCGCTCAA 636
consensus_9549#1      CGTCCGCCTGCTCCAGCCCGTCATCTTCTCCACATACGAGGCGAAGAACTCGCCTCTGAA 609
                      **** * ***********   ****************** ******* *  *** ** **

consensus_9549#0      GAACGCGCTCCTCTCCGACATCTGCATCAGCACATCCGCGGCGCCGACCTACCTCCCCGC 696
consensus_9549#1      GAACGCGCTGCTCTCCGACGTATGCATCGGCACGTCGTCGGCGCCGACGTACCTCCCCGC 669
                      ********* ********* * ****** **** **  ********** ***********

consensus_9549#0      GCACTGCTTCCAGACCACCGACGACGCCACCGGCAAGGTCCGCGAGTTCGACCTCATCGA 756
consensus_9549#1      GCACTGCTTCCGGACACACGACGGCGCCAGCGGCGAAACGCGCGAGTACAACCTCATCGA 729
                      *********** ***   ***** ***** **** *    ******* * **********

consensus_9549#0      CGGCGGCGTCGCCGCCAACAACCCGACGATGGTGGCCATGACGCAGATCACCAAGAAGAT 816
consensus_9549#1      CGGCGGTGTCGCCGCCAACAACCCTACGATGGTGGCCATGACAATGATCACGGAGGAGAT 789
                      ****** ***************** *****************   ******  ** ****

consensus_9549#0      AATGGTGAAGGACAAGGAGGAG---CTGTACCCGGTAAAGCCGTCG-------------- 859
consensus_9549#1      CATGGCGAAGGAGAAGGCGGCGGCGCTGTACCTGCTGAAGCCGCCGCCGGAGGAGGAGGA 849
                       **** ****** **** ** *   ******* * * ****** **              

consensus_9549#0      -GACTGCGGTAAGTTCCTGGTGCTGTCCGTGGGCACCGGGTCGACGTCGGACCAGGGGAT 918
consensus_9549#1      GGAGCACGGCCGGTTCCTGGTGCTGTCCATCGGCACCGGCCTGACCTCCGACGAGGGCCT 909
                       **   ***   **************** * ********   *** ** *** ****  *

consensus_9549#0      GTACACGGCGAGGCGGTGCTCGCGGTGGGGGATCGTCCGGTGGCTGCGCAACAAGGGGAT 978
consensus_9549#1      CTACACGGCGGAGAAGTGCTCCCGGTGGGGGGCGCTCTCGTGGCTGCGCCACGGCGGGAT 969
                       *********  *  ****** *********    **  ********** **   *****

consensus_9549#0      GGCGCCCATCATCGACATCTTCATGGCGGCCAGCTCCGACCTCGTCGACATCCACGCCGC 1038
consensus_9549#1      GGCCCCCATCATCGACATCTTCATGGCGGCGAGTTCCGACCTCGTCGACATCCACGTCGC 1029
                      *** ************************** ** ********************** ***

consensus_9549#0      CGTCATTTTCCAGTCGCTNCACAGCGACGGCGACTACCTCCGCATCCAGGACAACACGCT 1098
consensus_9549#1      CGTCAAGTTCCAGCTGCTCCACAGCGAGCGGAACTACCTCCGCGTGCAGGCCAACTCGCT 1089
                      *****  ******  *** ********  *  *********** * **** **** ****

consensus_9549#0      CCACGGCGACGCCGCCACGGTGGACGCCGCCACCAGGGACAACATGCGGGCGCTCGTCGG 1158
consensus_9549#1      GCGCGGTGCGGCGGCGGCGGTGGACGCGGCGACGCCGGAGAACATGGGGAGCCTCGTCGG 1149
                       * *** *  ** **  ********** ** **   *** ****** **   ********

consensus_9549#0      GATCGGCGAGCGGATGCTGGCGCAGCGGGTGTCGAGGGTCAACGTCGAGACCGGCAGGTA 1218
consensus_9549#1      CGTCGGCGAGCGGTTGCTGGCGCAGCGGGTGTCGAGGGTGAACGTGGAGACCGGGAGGTA 1209
                        *********** ************************* ***** ******** *****

consensus_9549#0      CGTCGAGGTGCCCGGCGCCGGCAGCAACGCCGACGCGCTGAAGGGCTTCGCCAGGCAGCT 1278
consensus_9549#1      CGAGGAGGTGCCCGGCGAGGGGAGCAACGCCGACGCGCTTGCTCGGATCGCCGGGAATCT 1269
                      **  *************  ** *****************     *  ***** ** * **

consensus_9549#0      CTCCGAGGAGAGGAGGGCGAGGCTAGGTCGGCGAAAGCCTGCGGCGGCGGCGGCGAAGGA 1338
consensus_9549#1      CTCCGAGGAGAGGACGGCGAGGATCAAGCGGCGGAACACTGTGCAGGCTGGTGTGACTGG 1329
                      ************** ******* *    ***** **  *** *  *** *  * **  * 

consensus_9549#0      GAGCCCAGCGGCGTGGCGTGCAAGCGTTAGTAACTGTACACGCATCATGTGACGCGATCT 1398
consensus_9549#1      G-----------------TTTTAGGAGTAGTCA-TGAAATCCCATCATGT--CCCATTGC 1369
                      *                 *   **   **** * ** *  * ********  * *  *  

consensus_9549#0      TTTTTATTTTTCTTTTTTTTTTTTTACCTTTCTAGCGGACATGGGGAATAACAAGACGTG 1458
consensus_9549#1      TCCACGTCTACTGTATTTCCGGGCGGGGGCCATTCCGAATTTCCGGTCGATCATCTCAAA 1429
                      *     * *    * ***              *  ** *  *  **   * **   *   

consensus_9549#0      ACAGTAGTGCAATCGGTTTGTAACGTGCGTATACCAACATTGATCCATTTCTTCAAAAAA 1518
consensus_9549#1      ATGTTTTT----TCGGTTGAAAAATTCGGTATAT-GCTGTTAAAAAGTTTAAATAAGGTA 1484
                      *   *  *    ******   **  *  *****      ** *    ***    **   *

consensus_9549#0      AAAAAAAAAAAAAA----- 1532
consensus_9549#1      AATAAATAATACCAGCTCC 1503
                      ** *** ** *  *