These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9570#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 832 fasta sequence [TGAGCAAAACGGTGGGATAGATTCATAGATAGATAGTAGTAGTACTGGATAGATAGAAAGATAGATAGTCCAGCCAGAAAGGTGCCGTCGCCTGTCTGTCTGGTCCAAGAAACAGAAACGTTCGTGTCGCCGTATAAGTTGCAGAACTCGTCGATCTCCAGTGTATAAGCGAATCAGTTTGTGGTTTGTTCCGGGAGGAAGAACAGAAGACCGGAAGGGTTGGCTGCGATGGCCGGAGGGAAGGCGGTGTACTCGTTCCAGGAGGTGAGCAAGC-ACAACGACCGGAAGGATTGCTGGCTCATCATCGCCGGCAAGGTGTACGACGTGTCGCCGTTCAT-GGAGGAGCACCCC-GGCGGCGACGAGGTCCTGC-TGG-C-GTGCACCG-GCAAGGACGC-G-ACCGCGGATTTCAACGACATCGGGCACACGGCGACGGCGAAGGAGCTGATGCCGCAGTACTGCATCGGCGAGGTCGACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGAGGACGCGAGCGCCAAGCCGGACGCCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCCGGTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCCAAGACCAAGACGGCGTAGGGCTAGGGCGGCTCTGCCGCCGCAGGCTGGGGGCCTCTTGGAATCGTCATCTGAATATTTGGGTCCATAGGTCGAAGTGTCAGACTGTCAATTAAGTGTACCAGTGCTAAGTGCTAGTTAATTATTAGTAATCTCCGTAAAGAAAAATAAATGTTTGCCGATGAAGTTCTGTTTTCTAAAAAAAAAA] [+] EMBL AK066861 [TGAGCAAAACGGTGGGATAGATTCATAGATAGATAGTAGTAGTACTGGATAGATAGAAAGATAGATAGTCCAGCCAGAAAGGTGCCGTCGCCTGTCTGTCTGGTCCAAGAAACAGAAACGTTCGTGTCGCCGTATAAGTTGCAGAACTCGTCGATCTCCAGTGTATAAGCGAATCAGTTTGTGGTTTGTTCCGGGAGGAAGAACAGAAGACCGGAAGGGTTGGCTGCGATGGCCGGAGGGAAGGCGGTGTACTCGTTCCAGGAGGTGAGCAAGC ACAACGACCGGAAGGATTGCTGGCTCATCATCGCCGGCAAGGTGTACGACGTGTCGCCGTTCAT GGAGGAGCACCCC GGCGGCGACGAGGTCCTGC TGG C GTGCACCG GCAAGGACGC G ACCGCGGATTTCAACGACATCGGGCACACGGCGACGGCGAAGGAGCTGATGCCGCAGTACTGCATCGGCGAGGTCGACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGAGGACGCGAGCGCCAAGCCGGACGCCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCCGGTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCCAAGACCAAGACGGCGTAGGGCTAGGGCGGCTCTGCCGCCGCAGGCTGGGGGCCTCTTGGAATCGTCATCTGAATATTTGGGTCCATAGGTCGAAGTGTCAGACTGTCAATTAAGTGTACCAGTGCTAAGTGCTAGTTAATTATTAGTAATCTCCGTAAAGAAAAATAAATG ] [+] EMBL CB967219 [ AGAAACAGAAACGTTCGTGTCGCCGTATAAGTTGCAGAACTCGTCGATCTCCAGTGTATAAGCGAATCAG TTGTGG TTGTTCCGGGAGGAAGAACAGAAGACCGGAAGGGTTGGCTGCGATGGCCGGAGGGAAGGCGGTGTACTCGTTCCAGGAGGTGAGCAAGC ACAACGACCGGAAGGATTGCTGGCTCATCATCGCCGGCAAGGTGTACGACGTGTCGCCGTTCATAGGAGGAGCACCCCNGGCGGCGACGAGGTCCTGC TGGNC GTGCACCGCGCAAGGACGCAGAACCGCGGATTTCA ] [+] EMBL BI795671 [ GTGGACCAGCAACAACGGCCGGAAGGATTGCTGGCTCATCATCGCCGGCAAGGTGTACGACG GTCGCCGTTCAT GGAGGAGCACCCC GGCGGCGACGAGGTCCTGCATGG CAGTGCACCG GCAAGGACGC G ACCGCGGATTTCAACGACATCGGGCACACGGCGACGGCGAAGGA CTGATGCC CAGTACTGCATCGGCGAGGTCGACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGA GACGCGAGCGCCAAGCCGGACGCCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCC GTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCC AGACC AGACGGCGTAGGGCTA GGCGGCTCTGCCGCTGCAGGCTGGGGGCCTCTTGGAATCGTCATCTGAATATTTGGGTCCATAGGTCGAAGTGTCAGACTGTCAATTAAGTGTACCAGTGCTAAGTGCTAGTTAATTATTAGTAATCTCCGTAAAGAAAAATAAATGTTTGCCGATGAAGTTCTGTTTTCTAAAAAAAAAA] [+] EMBL OSC4131 [ GCGAAGGAGCTGATGCCGCAGTACTGCATCGGCGAGGTCGACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGAGGACGCGAGCGCCAAGCCGGATGNCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCCGGTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCCAAGACCAAGACGGCGTAGGGCTAGGG ] [+] EMBL AU098330 [ CGAAGGAGCTGATGCCGCAGTACTGCATCGGCGAGGTCGACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGAGGACGCGAGCGCCAAGCCGGACGCCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCCGGTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCCAAGACCAAGACGGCGTAGGGCTAGGGCGGCTCTGCCGCCGCAGGCTGGGGGCCTCTTGGAATCGTCATCTGAATATTTGGGTCCATAGGTCGAAGTGTCAGACTGTCAATTAAGTGTACCAGTGCTAAGTGCTAGTTAATTATTAGTAATCTCCGTAAAGAAAAATAAATGTTTGCCGATGAAaaaaaaa ] [+] EMBL BI799935 [ ACGCCTCCACGGTCCCGGCCAAGCCGGCCTACCGCGTCGTCTCCGA GACGCGAGCGCCAAGCCGGACGCCGCGAGCCAGGGCGCCTGGCTCACGGCGCTGCAGCTCGCCGTGCCGGTTGTGCTGCTGGGGCTGGCCTACGCGCTCCAGGACTTCGCCAAGACCAAGACGGCGTAGGGCTA GGCGGCTCTGCCGCTGCA GCTGGGGCCCTCTTGGAATCGTCATCTGAATATTTGGGTCCATAGGTCGAAGTGTCAGACTGTCAATTAAGTGTACCAGTGCTAAGTGCTAGTTAATTATTAGTAATCTCCGTAAAGAAAAATAAATGTTT CCGATGAAGTTCTGTTTTCTAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||