cluster # 9580

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Oryza sativa
cluster # 9580 cluster # 9580 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9580#0 length = 824 sequences # 6
consensusID : consensus_9580#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 824
fasta sequence
                              [CAAAAGGCCAGASAACGCCCGTTGCGCCGCCTCCCAAACTCCGCCTCCTCCTCCTCCGCTGCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGGGCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGGCGCCG-GGA-AGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTTATGT-GGACAAGGCTGGCCAAAAGAAGCAGGACTACGAGAA-GACCAAGGCCAAC-TTCGATAAGAAGGAGAGCAC-AAGCTCAAA--GAAAGC-TAAGA-CCCATGA-TGAT-GGA-GAAGGCTCTGACAAGTCCAAGTCTGAGGTCGACGATGACCAGGATGGTGGTAGCGATGAGGAAAATGAGGACGATGAAGAGTAAATAGTGTATCCGGGGGCATGAGGTAGCAAACTGTGTCTTAGGTCCCCTATTAGCTTTACTAGTTTGCTATCTTCGACCCTAAGATGTTGGGAATAGGCGTGCGTGGGTGTGAAGGGGGACCGTTTAGAATTATGGTACTCAGAATGTTTTCCTACAGTGGATTAGCAAAGAAAAAGCCTGAATGCCGCCTGCTGTTCTGTTGCTTTTCTTTTGCTAACCACTTGTCACAGAACTTTGTTTCATTTGCTAATCTAGTAGCAATTCAGTTAAAAA]

[+] EMBL AB079636             [CAAAAGGCCAGASAACGCCCGTTGCGCCGCCTCCCAAACTCCGCCTCCTCCTCCTCCGCTGCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGGGCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGGCGCCG GGA AGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGGCAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTTATGT GGACAAGGCTGGCCAAAAGAAGCAGGACTACGAGAA GACCAAGGCCAAC TTCGATAAGAAGGAGAGCAC AAGCTCAAA  GAAAGC TAAGA CCCATGA TGAT GGA GAAGGCTCTGACAAGTCCAAGTCTGAGGTCGACGATGACCAGGATGGTGGTAGCGATGAGGAAAATGAGGACGATGAAGAGTAAATAGTGTATCC GGGGCATGAGGTAGCAAACTGTGTCTTAGGTCCCATATTASCTTTACTAGTTT                                                                                                                                                                                                                ]
[+] EMBL OSC02271             [                         GCCGCCTCCCAAACTCCGCCTCCTCCTCCTCCGCTGCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGGGCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGG GCCGTGTA AGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CF291336             [                                        CCGCCTCCTCCTCCTCCGCTGCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGGGCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGGCGCCG GGA AGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTTATGT GGACAAGGCTGGCCAAAAGAAGCAGGACTACGAGAA GACCAAGGCCAAC TTCGATAAGAAGGAGAGCAC AAGCTCAAA  GAAAGC TAAGA CCCATGA TGATGGGA GAAGGCTCTGACAAGTCCAAGTCTGAGGTCGACGAT ACCAGGATGGTGGTAGCGATGAGGAAAATGAGGACGATGAAGAGTAAATAGTGTATCCGGGGGCATGA                                                                                                                                                                                                                                                            ]
[+] EMBL C73471               [                                                       CCGCTGCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGGGCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGGCGCCG GGANAGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTTATGTGGGACAAGGCTGGCCAAAAGAANCAGGACTACGAGAAGGACCAAGGCCAACTTTCGATAAGAAGGAGAGCACAAAGCTCAAAAGGAAAGCTTANGACCCCTTGATTGAT GGAGGAAGGTTTTGACAAGTC                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL AU101282             [                                                                                                                                                       CAGG TCAAGGCCGCC GCGGCGCCG GGA AGCGGAAGAA GCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCTTCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCGCCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTTATGT GGACAAGGCTGGCCAAAAGAAGCAGGACTACGAGAA GACCAAGGCCAAC TTCGATAAGAAGGAGAGCAC AAGCTCAAA  GAAAGC TAAGA CCCATGA TGAT GGA GAAGGCTCTGACAAGTCCAAGTCTGAGGTCGACGATGACCAGGATGGTGGTAGCGATGAGGAAAATGAGGACGATGAAGAGTAAATAGTGTATCCGGGGGCATGAGGTAGCAAACTGTGTCTTAGGTCCCCTATTAGCTTTACTAGTTTGCTATCTTCGACCCTAAGATGTTGGGAATAGGCGTGCGTGGGTGTGAAGGGGGACCGTTTAGAATTATGGTACTCAGAATGTTTTCCTACAGTGGATTAGCAAAGAAAAAGCCTGAATGCCGCCTGCTGTTCTGTTGCTTTTCTTTTGCTAACCACTTGTCACAGAACTTTGTTTCATTTGCTAATCTAGTAGCAATTCAGTTAAAAA]
[+] EMBL AU225802             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            gccgctCTGTGTCTTAGGTCCCCTATTAGCTTTACTAGTTTGCTATCTTCGACCCTAAGATGTTGGGAATAGGCGTGCGTGGGTGTGAAGGGGGACCGTTTAGAATTATGGTACTCAGAATGTTTTCCTACAGTGGATTAGCAAAGAAAAAGCCTGAATGCCGCCTGCTGTTCTGTTGCTTTTCTTTTGCTAACCACTTGTCACAGAACTTTGTTTCATTTGCTAATCTAGTAGCAATTCAGagcgg  ]




>consensus_9580#0
CAAAAGGCCAGASAACGCCCGTTGCGCCGCCTCCCAAACTCCGCCTCCTCCTCCTCCGCT
GCACCCCCGCAAAAACCCTAGCGCACCGACTTCGCGATCTCCGCGCCGCAGCCATGAAGG
GCAAGGCCGACGCCTCCAAGAAGGGCGAGGGCAGGCTCAAGGCCGCCGGCGGCGCCGGGA
AGCGGAAGAAGGCCGCCGCTAGCGGCAAGCCGAAGCGCCCGCCGTCTGCTTTCTTCGTCT
TCATGTCTGAGTTCAGGCAGGAGTACCAGGCAGCGCATCCTGACAACAAGAGTGTCGCCG
CCGTGAGCAAGGCTGCAGGGGAGAAGTGGCGAGCTATGTCTGAGCAAGAGAAGGCACCTT
ATGTGGACAAGGCTGGCCAAAAGAAGCAGGACTACGAGAAGACCAAGGCCAACTTCGATA
AGAAGGAGAGCACAAGCTCAAAGAAAGCTAAGACCCATGATGATGGAGAAGGCTCTGACA
AGTCCAAGTCTGAGGTCGACGATGACCAGGATGGTGGTAGCGATGAGGAAAATGAGGACG
ATGAAGAGTAAATAGTGTATCCGGGGGCATGAGGTAGCAAACTGTGTCTTAGGTCCCCTA
TTAGCTTTACTAGTTTGCTATCTTCGACCCTAAGATGTTGGGAATAGGCGTGCGTGGGTG
TGAAGGGGGACCGTTTAGAATTATGGTACTCAGAATGTTTTCCTACAGTGGATTAGCAAA
GAAAAAGCCTGAATGCCGCCTGCTGTTCTGTTGCTTTTCTTTTGCTAACCACTTGTCACA
GAACTTTGTTTCATTTGCTAATCTAGTAGCAATTCAGTTAAAAA
clustalw multiple alignements is not computed in this case