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Oryza sativa
cluster # 9599 cluster # 9599       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9599#0 length = 2688 sequences # 5  
consensus_9599#1 length = 689 sequences # 1  

consensusID : consensus_9599#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2688
fasta sequence
                              [GTTTTCTCCGCCACCGAGCGCATCTCGGCGTCGGCGGCTTGGGGGGAGAGTCAGAGATGCATCTGAGCGAGAACGAGGGGATCGAGGGCGTGCGGTTCGCGGTGACGGGCGGCCAGGGCTTCGTCGGCTCCGCACTGTGCCTCGAGCTGCTCCGCCGCGGCGCCCGGGAGGTCCGCTCCCTCGACCTCCGCGCCTCCTCCCCCTGGTCCGACCAGCTGCTCGGCGCCGGCGTCCGCTTCTTCCAAGGGGATGTTAGAAAGAAGGAAGATGTGGGGAAGGCTTTGCGCGGTGTGGACTGTGTTTTCCATCTCGCTTCGTATGGCATGTCAGGGAAGGAAATGGTACAGGCTGGGCGAGCCGACGAGGTCAATATAAATGGTACATGCAATGTGCTGGACGCTTGCCACGAGCATGGTGTTAGAAGGCTCGTGTATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATGGGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTAGCAAATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAAGCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGCGGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGGATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGATATTGGCAAGCATGGGACTTTTAGATGATATTCCTGACAGGAAGGGAATTCCTGTAGCTGCTGGTCAAGCATATTTCATATGTGATGGATCGCCTGTCAATACTTTTGAATTTCTCAGTCCTCTATTTCAAAGTTTGGATTACACAGTTCCACGAGTTAGAATGGATACCTCAGTTGCTCTTGCCATCTCAAGATTTTTTGTGTTCATGTATACACTACTCTATCCATGGTTGGATAGTAAATGGATTCCTCAGCCTCTTCTCCTTCCTGCTGAAGTATACAAGGTGGGTGTTACACACTACTTTTCATATTTGAAAGCTAGAGAGGAAATCGGCTATGTACCTATGGTGAGCCCGCGAGAAGGATTGGCTGCAACTATTTCCTACTGGCAGGAGAGGAAGAGAAAAGAACTAGATGGCCCAACCATATTTCCTTGGCTGTTTGTAACAATTGGCATGCTGGCATTGTTTTCTGCTGCTTACCTTCCACCCGTCGGTCCATTGAAATGGGTGCTTGACCTCCATTTATTTGTTTTCCGATCAAAGTTGGTGATTCGGTTAGTCTTTGTGATAGCAACTGCATTGCACGTTGGTGAAGCTGTTTATGCTTGGTTCTTGGCAAAGAAGTATGACCCGAGGAATGCTACAGGTTGGTTTTGGCAAACATTCATGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAGAATGAGAGAGTAGATTTGTGCTGTTATTCCCTTCACTTTGTCAGGAAATCTTCAACAGTAATTTCTAGCTGAAATGCCTCAGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGTCAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCCATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGTACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCTATGCTTTGAAACTGAACTATAAATCAATAATTGGAAAGCTGAACAAAAGCCAGCTTCTCTTGCCTGTCAGTTACGTACATATACAGCACAAACCCTGTCTTTTGCCAATGCAGAACTGGAGTACTCTTGGATTGGTCTTTGTTCCTTCTCTGCAGCTATCTACCTACCTCTGAACTGGAAGTCCCAAGAACTACAAGCATATTACAGCCTGATGGCAGAGTGACGACAGGTCAGTTAAACTGCTTCCATGAGAAAAATGAGTTGTTGCAGGCTTGCAGCTGTGTTGTGCCCCTCCACTCGTCTGATTCTTCTACCAACCTCGCAACCAACCTTTGCCCTTCATTTAATAAAAGCCAGTGTCGGCGGCGAGAGGAAGCAACCGAATGAAAAGAAGAAGAATAGGTGAGGTGAGGCCCGAGTGTTATTATCGGAGTTGGACTTGTGAACGACTTGTGAACTGCAGCCGCGCAATCCGTCGATTTGTGTGTGGCTCGCGTGCTTCTTCCAGATCACATTTCAGGTCCCTTCGGTTTGACTGTATGAGATGATTTTTCTGTCGAATGAATTGGCGTATGAGATAATTTTTCTGTCGATTGATTTTTCGGTTTGACTGAATGGGATGATTGCACGTTGCCGCAAGGAATATATGGTGTAAGTAAGGTCAAAGTCCTCTGATCTTGGAAAGAATTGGGCAGAAACATATCGTAGGAACAAAACGTGACACACGCTTGCATTTGTGCTGATGAGAAATGTAGGCATGCAGTTTCAGTTTTTGCATTGTACTGATGAGAATGATGTTTGTGATGGTTGCAATGGCTGGCATGTTTG]

[+] EMBL CB647917             [GTTTTCTCCGCCACCGAGCGCATCTCGGCGTCGGCGGCTTGGGGGGAGAGTCAGAGATGCATCTGAGCGAGAACGAGGGGATCGAGGGCGTGCGGTTCGCGGTGACGGGCGGCCAGGGCTTCGTCGGCTCCGCACTGTGCCTCGAGCTGCTCCGCCGCGGCGCCCGGGAGGTCCGCTCCCTCGACCTCCGCGCCTCCTCCCCCTGGTCCGACCAGCTGCTCGGCGCCGGCGTCCGCTTCTTCCAAGGGGATGTTAGAAAGAAGGAAGATGTGGGGAAGGCTTTGCGCGGTGTGGACTGTGTTTTCCATCTCGCTTCGTATGGCATGTCAGGGAAGGAAATGGTACAGGCTGGGCGAGCCGACGAGGTCAATATAAATGGTACATGCAATGTGCTGGACGCTTGCCACGAGCATGGTGTTAGAAGGCTCGTGTATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATGGGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTAGCAAATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAAGCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGCGGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGGATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL AK070855             [                                           GGGAGAGTCAGAGATGCATCTGAGCGAGAACGAGGGGATCGAGGGCGTGCGGTTCGCGGTGACGGGCGGCCAGGGCTTCGTCGGCTCCGCACTGTGCCTCGAGCTGCTCCGCCGCGGCGCCCGGGAGGTCCGCTCCCTCGACCTCCGCGCCTCCTCCCCCTGGTCCGACCAGCTGCTCGGCGCCGGCGTCCGCTTCTTCCAAGGGGATGTTAGAAAGAAGGAAGATGTGGGGAAGGCTTTGCGCGGTGTGGACTGTGTTTTCCATCTCGCTTCGTATGGCATGTCAGGGAAGGAAATGGTACAGGCTGGGCGAGCCGACGAGGTCAATATAAATGGTACATGCAATGTGCTGGACGCTTGCCACGAGCATGGTGTTAGAAGGCTCGTGTATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATGGGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTAGCAAATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAAGCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGCGGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGGATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGATATTGGCAAGCATGGGACTTTTAGATGATATTCCTGACAGGAAGGGAATTCCTGTAGCTGCTGGTCAAGCATATTTCATATGTGATGGATCGCCTGTCAATACTTTTGAATTTCTCAGTCCTCTATTTCAAAGTTTGGATTACACAGTTCCACGAGTTAGAATGGATACCTCAGTTGCTCTTGCCATCTCAAGATTTTTTGTGTTCATGTATACACTACTCTATCCATGGTTGGATAGTAAATGGATTCCTCAGCCTCTTCTCCTTCCTGCTGAAGTATACAAGGTGGGTGTTACACACTACTTTTCATATTTGAAAGCTAGAGAGGAAATCGGCTATGTACCTATGGTGAGCCCGCGAGAAGGATTGGCTGCAACTATTTCCTACTGGCAGGAGAGGAAGAGAAAAGAACTAGATGGCCCAACCATATTTCCTTGGCTGTTTGTAACAATTGGCATGCTGGCATTGTTTTCTGCTGCTTACCTTCCACCCGTCGGTCCATTGAAATGGGTGCTTGACCTCCATTTATTTGTTTTCCGATCAAAGTTGGTGATTCGGTTAGTCTTTGTGATAGCAACTGCATTGCACGTTGGTGAAGCTGTTTATGCTTGGTTCTTGGCAAAGAAGTATGACCCGAGGAATGCTACAGGTTGGTTTTGGCAAACATTCATGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAGAATGAGAGAGTAGATTTGTGCTGTTATTCCCTTCACTTTGTCAGGAAATCTTCAACAGTAATTTCTAGCTGAAATGCCTCAGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGTCAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCCATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGTACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCTATGCTTTGAAACTGAACTATAAATCAATAATTGGAAAGCTGAACAAAAGCCAGCTTCTCTTGCCTGTCAGTTACGTACATATACAGCACAAACCCTGTCTTTTGCCAATGCAGAACTGGAGTACTCTTGGATTGGTCTTTGTTCCTTCTCTGCAGCTATCTACCTACCTCTGAACTGGAAGTCCCAAGAACTACAAGCATATTACAGCCTGATGGCAGAGTGACGACAGGTCAGTTAAACTGCTTCCATGAGAAAAATGAGTTGTTGCAGGCTTGCAGCTGTGTTGTGCCCCTCCACTCGTCTGATTCTTCTACCAACCTCGCAACCAACCTTTGCCCTTCATTTAATAAAAGCCAGTGTCGGCGGCGAGAGGAAGCAACCGAATGAAAAGAAGAAGAATAGGTGAGGTGAGGCCCGAGTGTTATTATCGGAGTTGGACTTGTGAACGACTTGTGAACTGCAGCCGCGCAATCCGTCGATTTGTGTGTGGCTCGCGTGCTTCTTCCAGATCACATTTCAGGTCCCTTCGGTTTGACTGTATGAGATGATTTTTCTGTCGAATGAATTGGCGTATGAGATAATTTTTCTGTCGATTGATTTTTCGGTTTGACTGAATGGGATGATTGCACGTTGCCGCAAGGAATATATGGTGTAAGTAAGGTCAAAGTCCTCTGATCTTGGAAAGAATTGGGCAGAAACATATCGTAGGAACAAAACGTGACACACGCTTGCATTTGTGCTGATGAGAAATGTAGGCATGCAGTTTCAGTTTTTGCATTGTACTGATGAGAATGATGTTTGTGATGGTTGCAATGGCTGGCATGTTTG]
[+] EMBL OSS10785A            [                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATGGGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTANAACATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAAGCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGCGGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGGATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGATATTGGCAAGCATGGGACTTTTAGATGATATTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB647918             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CGAGAAGGATTGGCTGCAACTATTTCCTACTGGCAGGAGAGGAAGAGAAAAGAACTAGATGGCCCAACCATATTTCCTTGGCTGTTTGTAACAATTGGCATGCTGGCATTGTTTTCTGCTGCTTACCTTCCACCCGTCGGTCCATTGAAATGGGTGCTTGACCTCCATTTATTTGTTTTCCGATCAAAGTTGGTGATTCGGTTAGTCTTTGTGATAGCAACTGCATTGCACGTTGGTGAAGCTGTTTATGCTTGGTTCTTGGCAAAGAAGTATGACCCGAGGAATGCTACAGGTTGGTTTTGGCAAACATTCATGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAGAATGAGAGAGTAGATTTGTGCTGTTATTCCCTTCACTTTGTCAGGAAATCTTCAACAGTAATTTCTAGCTGAAATGCCTCAGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGTCAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCCATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGTACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCTATGCTTTGAAAGGGAACTATAAATCAATAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU162816             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TCTTTGTGATAGCAACTGC TTGCACGTTGGTG AGCTGTTTATGC TGGTTCTTGGC AAGAAGTATGACCCGAGG ATGCTACAGGTTGGTTTTGGCAAACATTC TGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAG ATGAGAGAGTAGATTTGTGCTGTTATTCCCTTCACTTTGTCAGG AATCTTCAACAGTAATTTCTAGCTG AATGCCTCAGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGTCAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCCATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGTACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCTATGCTTTGAAACTGAACTATAAATCAATAATTGGAAAGCTGAACAAAAaaaaa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]


>consensus_9599#0 GTTTTCTCCGCCACCGAGCGCATCTCGGCGTCGGCGGCTTGGGGGGAGAGTCAGAGATGC ATCTGAGCGAGAACGAGGGGATCGAGGGCGTGCGGTTCGCGGTGACGGGCGGCCAGGGCT TCGTCGGCTCCGCACTGTGCCTCGAGCTGCTCCGCCGCGGCGCCCGGGAGGTCCGCTCCC TCGACCTCCGCGCCTCCTCCCCCTGGTCCGACCAGCTGCTCGGCGCCGGCGTCCGCTTCT TCCAAGGGGATGTTAGAAAGAAGGAAGATGTGGGGAAGGCTTTGCGCGGTGTGGACTGTG TTTTCCATCTCGCTTCGTATGGCATGTCAGGGAAGGAAATGGTACAGGCTGGGCGAGCCG ACGAGGTCAATATAAATGGTACATGCAATGTGCTGGACGCTTGCCACGAGCATGGTGTTA GAAGGCTCGTGTATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATG GGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTAGCA AATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAA GCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGC GGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGG ATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGATATTGG CAAGCATGGGACTTTTAGATGATATTCCTGACAGGAAGGGAATTCCTGTAGCTGCTGGTC AAGCATATTTCATATGTGATGGATCGCCTGTCAATACTTTTGAATTTCTCAGTCCTCTAT TTCAAAGTTTGGATTACACAGTTCCACGAGTTAGAATGGATACCTCAGTTGCTCTTGCCA TCTCAAGATTTTTTGTGTTCATGTATACACTACTCTATCCATGGTTGGATAGTAAATGGA TTCCTCAGCCTCTTCTCCTTCCTGCTGAAGTATACAAGGTGGGTGTTACACACTACTTTT CATATTTGAAAGCTAGAGAGGAAATCGGCTATGTACCTATGGTGAGCCCGCGAGAAGGAT TGGCTGCAACTATTTCCTACTGGCAGGAGAGGAAGAGAAAAGAACTAGATGGCCCAACCA TATTTCCTTGGCTGTTTGTAACAATTGGCATGCTGGCATTGTTTTCTGCTGCTTACCTTC CACCCGTCGGTCCATTGAAATGGGTGCTTGACCTCCATTTATTTGTTTTCCGATCAAAGT TGGTGATTCGGTTAGTCTTTGTGATAGCAACTGCATTGCACGTTGGTGAAGCTGTTTATG CTTGGTTCTTGGCAAAGAAGTATGACCCGAGGAATGCTACAGGTTGGTTTTGGCAAACAT TCATGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAGAATGAGAGAGTAGATTTGTG CTGTTATTCCCTTCACTTTGTCAGGAAATCTTCAACAGTAATTTCTAGCTGAAATGCCTC AGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGT CAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCC ATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGT ACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGT TGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCT ATGCTTTGAAACTGAACTATAAATCAATAATTGGAAAGCTGAACAAAAGCCAGCTTCTCT TGCCTGTCAGTTACGTACATATACAGCACAAACCCTGTCTTTTGCCAATGCAGAACTGGA GTACTCTTGGATTGGTCTTTGTTCCTTCTCTGCAGCTATCTACCTACCTCTGAACTGGAA GTCCCAAGAACTACAAGCATATTACAGCCTGATGGCAGAGTGACGACAGGTCAGTTAAAC TGCTTCCATGAGAAAAATGAGTTGTTGCAGGCTTGCAGCTGTGTTGTGCCCCTCCACTCG TCTGATTCTTCTACCAACCTCGCAACCAACCTTTGCCCTTCATTTAATAAAAGCCAGTGT CGGCGGCGAGAGGAAGCAACCGAATGAAAAGAAGAAGAATAGGTGAGGTGAGGCCCGAGT GTTATTATCGGAGTTGGACTTGTGAACGACTTGTGAACTGCAGCCGCGCAATCCGTCGAT TTGTGTGTGGCTCGCGTGCTTCTTCCAGATCACATTTCAGGTCCCTTCGGTTTGACTGTA TGAGATGATTTTTCTGTCGAATGAATTGGCGTATGAGATAATTTTTCTGTCGATTGATTT TTCGGTTTGACTGAATGGGATGATTGCACGTTGCCGCAAGGAATATATGGTGTAAGTAAG GTCAAAGTCCTCTGATCTTGGAAAGAATTGGGCAGAAACATATCGTAGGAACAAAACGTG ACACACGCTTGCATTTGTGCTGATGAGAAATGTAGGCATGCAGTTTCAGTTTTTGCATTG TACTGATGAGAATGATGTTTGTGATGGTTGCAATGGCTGGCATGTTTG



consensusID : consensus_9599#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 689
fasta sequence
                              [CTCCCTTTCTTGGTTTTCCGATCAAAGTTGGGTGTTGGGGTTGTCTTNGTGATAGCCAATGCATTGCCCGTGGGGAAAGCCGTTTCTGCTTGGTTCTGGGCAAAGAAGTATGACCCGAGGAATGGTACAGGTTGGTTTTGGCAACCATTCATGTTCGGGTTCTTTTCTCTTCGGTATCGGCTTAAGAGAATGGGAGAGTAGATTTGTGCTGTTATTCCCTTCCCTTTGTCAGGAAATCTTCAACAGTAATTTTTAGTTGAAATGCCTCGGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTTTGAGTCATATGGGACTTCGGTCAGTCTTGAGAAGCGGAGTGTGCAGAACCCATGGTCTTCTTTTATAGTAGGTATTCAGCCATGGTTTTGGTTTTTGCATGAAGCCAAACCCCCCAGCCCATTGTTAGAGTTGCAGCTTGTACCCTTAGCTTAGATGGCATTTGTTTTGGGTCTGGAGAGACCAATTGAACTTAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGGGGCTATGCCATACTGTACCTCCTATGCTTTGAAACTGAACTTTAAATCAATAATTGGAAAGGTGAACAAAAGCCAGCTTCTCTTGCCTGTCAGTTACGTTCATTTCCAGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[-] EMBL CA762169             [CTCCCTTTCTTGGTTTTCCGATCAAAGTTGGGTGTTGGGGTTGTCTTNGTGATAGCCAATGCATTGCCCGTGGGGAAAGCCGTTTCTGCTTGGTTCTGGGCAAAGAAGTATGACCCGAGGAATGGTACAGGTTGGTTTTGGCAACCATTCATGTTCGGGTTCTTTTCTCTTCGGTATCGGCTTAAGAGAATGGGAGAGTAGATTTGTGCTGTTATTCCCTTCCCTTTGTCAGGAAATCTTCAACAGTAATTTTTAGTTGAAATGCCTCGGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTTTGAGTCATATGGGACTTCGGTCAGTCTTGAGAAGCGGAGTGTGCAGAACCCATGGTCTTCTTTTATAGTAGGTATTCAGCCATGGTTTTGGTTTTTGCATGAAGCCAAACCCCCCAGCCCATTGTTAGAGTTGCAGCTTGTACCCTTAGCTTAGATGGCATTTGTTTTGGGTCTGGAGAGACCAATTGAACTTAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGGGGCTATGCCATACTGTACCTCCTATGCTTTGAAACTGAACTTTAAATCAATAATTGGAAAGGTGAACAAAAGCCAGCTTCTCTTGCCTGTCAGTTACGTTCATTTCCAGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9599#1 CTCCCTTTCTTGGTTTTCCGATCAAAGTTGGGTGTTGGGGTTGTCTTNGTGATAGCCAAT GCATTGCCCGTGGGGAAAGCCGTTTCTGCTTGGTTCTGGGCAAAGAAGTATGACCCGAGG AATGGTACAGGTTGGTTTTGGCAACCATTCATGTTCGGGTTCTTTTCTCTTCGGTATCGG CTTAAGAGAATGGGAGAGTAGATTTGTGCTGTTATTCCCTTCCCTTTGTCAGGAAATCTT CAACAGTAATTTTTAGTTGAAATGCCTCGGCATATGCACTTTTAACTGCTGTGGAACTTC ATTTTTTTGAGTCATATGGGACTTCGGTCAGTCTTGAGAAGCGGAGTGTGCAGAACCCAT GGTCTTCTTTTATAGTAGGTATTCAGCCATGGTTTTGGTTTTTGCATGAAGCCAAACCCC CCAGCCCATTGTTAGAGTTGCAGCTTGTACCCTTAGCTTAGATGGCATTTGTTTTGGGTC TGGAGAGACCAATTGAACTTAATGGAGTTGTAAGTTGTCATTGTTACAATTGGCATATGT TTGGGGGCTATGCCATACTGTACCTCCTATGCTTTGAAACTGAACTTTAAATCAATAATT GGAAAGGTGAACAAAAGCCAGCTTCTCTTGCCTGTCAGTTACGTTCATTTCCAGCCCCAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9599#0      GTTTTCTCCGCCACCGAGCGCATCTCGGCGTCGGCGGCTTGGGGGGAGAGTCAGAGATGC 60
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      ATCTGAGCGAGAACGAGGGGATCGAGGGCGTGCGGTTCGCGGTGACGGGCGGCCAGGGCT 120
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TCGTCGGCTCCGCACTGTGCCTCGAGCTGCTCCGCCGCGGCGCCCGGGAGGTCCGCTCCC 180
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TCGACCTCCGCGCCTCCTCCCCCTGGTCCGACCAGCTGCTCGGCGCCGGCGTCCGCTTCT 240
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TCCAAGGGGATGTTAGAAAGAAGGAAGATGTGGGGAAGGCTTTGCGCGGTGTGGACTGTG 300
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TTTTCCATCTCGCTTCGTATGGCATGTCAGGGAAGGAAATGGTACAGGCTGGGCGAGCCG 360
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      ACGAGGTCAATATAAATGGTACATGCAATGTGCTGGACGCTTGCCACGAGCATGGTGTTA 420
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GAAGGCTCGTGTATGTAAGCACGTATAATGTGGTTTTTGGAGGAGAGCCGATTGTCAATG 480
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GGAACGAGGCGCTGCCTTATTTCCCTGTTGAAGACCATGTTGATGCCTATGCGCGTAGCA 540
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      AATCAATTGCTGAACAGTTGGTGCTGAAGAGTAATGGCCGGCAAACTAAGAGTGATAAAA 600
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GCAGTCGTCTTTATACATGCTCAATACGTCCCGCCGCTATCTATGGTCCAGGTGAAGAGC 660
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GGCATCTTCCAAGGATACTATCCCTTGCGAAGTTGGGATTAGCATTCTTCAAGATTGGGG 720
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      ATCCAAATGTGAAGTCAGATTGGGTCTATGTGGATAATCTTGTTCTTGCACTGATATTGG 780
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      CAAGCATGGGACTTTTAGATGATATTCCTGACAGGAAGGGAATTCCTGTAGCTGCTGGTC 840
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      AAGCATATTTCATATGTGATGGATCGCCTGTCAATACTTTTGAATTTCTCAGTCCTCTAT 900
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TTCAAAGTTTGGATTACACAGTTCCACGAGTTAGAATGGATACCTCAGTTGCTCTTGCCA 960
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TCTCAAGATTTTTTGTGTTCATGTATACACTACTCTATCCATGGTTGGATAGTAAATGGA 1020
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TTCCTCAGCCTCTTCTCCTTCCTGCTGAAGTATACAAGGTGGGTGTTACACACTACTTTT 1080
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      CATATTTGAAAGCTAGAGAGGAAATCGGCTATGTACCTATGGTGAGCCCGCGAGAAGGAT 1140
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TGGCTGCAACTATTTCCTACTGGCAGGAGAGGAAGAGAAAAGAACTAGATGGCCCAACCA 1200
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TATTTCCTTGGCTGTTTGTAACAATTGGCATGCTGGCATTGTTTTCTGCTGCTTACCTTC 1260
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      CACCCGTCGGTCCATTGAAATGGGTGCTTGACCTCCATTTATTTGTTTTCCGATCAAAGT 1320
consensus_9599#1      --------------------------------CTCCCTTTCTTGGTTTTCCGATCAAAGT 28
                                                      **** *** ** ****************

consensus_9599#0      TGGTGATTCGGTTAGTCTTTGTGATAGCAACTGCATTGCACGTTGGTGAAGCTGTTTATG 1380
consensus_9599#1      TGGGTGTTGGGGTTGTCTTNGTGATAGCCAATGCATTGCCCGTGGGGAAAGCCGTTTCTG 88
                      ***   ** ** * ***** ******** * ******** *** **  **** **** **

consensus_9599#0      CTTGGTTCTTGGCAAAGAAGTATGACCCGAGGAATGCTACAGGTTGGTTTTGGCAAACAT 1440
consensus_9599#1      CTTGGTTCTGGGCAAAGAAGTATGACCCGAGGAATGGTACAGGTTGGTTTTGGCAACCAT 148
                      ********* ************************** ******************* ***

consensus_9599#0      TCATGCTCGGGTTCTTTTCTCTTCGGTATCTGCTTAAGAGAATGAGAGAGTAGATTTGTG 1500
consensus_9599#1      TCATGTTCGGGTTCTTTTCTCTTCGGTATCGGCTTAAGAGAATGGGAGAGTAGATTTGTG 208
                      ***** ************************ ************* ***************

consensus_9599#0      CTGTTATTCCCTTCACTTTGTCAGGAAATCTTCAACAGTAATTTCTAGCTGAAATGCCTC 1560
consensus_9599#1      CTGTTATTCCCTTCCCTTTGTCAGGAAATCTTCAACAGTAATTTTTAGTTGAAATGCCTC 268
                      ************** ***************************** *** ***********

consensus_9599#0      AGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTCTGAGTCATATGTGACTTCTGT 1620
consensus_9599#1      GGCATATGCACTTTTAACTGCTGTGGAACTTCATTTTTTTGAGTCATATGGGACTTCGGT 328
                       ************************************* *********** ****** **

consensus_9599#0      CAGTCTTGAGAAGCAGAGTGTGCAGAACCCATGGTCTTCTATGATAGTAGGTATTCAGCC 1680
consensus_9599#1      CAGTCTTGAGAAGCGGAGTGTGCAGAACCCATGGTCTTCTTTTATAGTAGGTATTCAGCC 388
                      ************** ************************* * *****************

consensus_9599#0      ATGGTTTTCGATCTTGCATGAAGCCAAACCACACAGCACATTGTTAGAGTTGCAGCTTGT 1740
consensus_9599#1      ATGGTTTTGGTTTTTGCATGAAGCCAAACCCCCCAGCCCATTGTTAGAGTTGCAGCTTGT 448
                      ******** * * ***************** * **** **********************

consensus_9599#0      ACCATTAGCTTAGATGGCATTTGTTTTGGGACTGGAGAGAACAATTGAACATAATGGAGT 1800
consensus_9599#1      ACCCTTAGCTTAGATGGCATTTGTTTTGGGTCTGGAGAGACCAATTGAACTTAATGGAGT 508
                      *** ************************** ********* ********* *********

consensus_9599#0      TGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGAGGCTATACCATACTGTACCTCCT 1860
consensus_9599#1      TGTAAGTTGTCATTGTTACAATTGGCATATGTTTGGGGGCTATGCCATACTGTACCTCCT 568
                      ************************************ ****** ****************

consensus_9599#0      ATGCTTTGAAACTGAACTATAAATCAATAATTGGAAAGCTGAACAAAAGCCAGCTTCTCT 1920
consensus_9599#1      ATGCTTTGAAACTGAACTTTAAATCAATAATTGGAAAGGTGAACAAAAGCCAGCTTCTCT 628
                      ****************** ******************* *********************

consensus_9599#0      TGCCTGTCAGTTACGTACATATACAGCACAAACCCTGTCTTTTGCCAATGCAGAACTGGA 1980
consensus_9599#1      TGCCTGTCAGTTACGTTCATTTCCAGCCCCAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 688
                      **************** *** * **** * **              **   * **    *

consensus_9599#0      GTACTCTTGGATTGGTCTTTGTTCCTTCTCTGCAGCTATCTACCTACCTCTGAACTGGAA 2040
consensus_9599#1      A----------------------------------------------------------- 689
                                                                                  

consensus_9599#0      GTCCCAAGAACTACAAGCATATTACAGCCTGATGGCAGAGTGACGACAGGTCAGTTAAAC 2100
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TGCTTCCATGAGAAAAATGAGTTGTTGCAGGCTTGCAGCTGTGTTGTGCCCCTCCACTCG 2160
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TCTGATTCTTCTACCAACCTCGCAACCAACCTTTGCCCTTCATTTAATAAAAGCCAGTGT 2220
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      CGGCGGCGAGAGGAAGCAACCGAATGAAAAGAAGAAGAATAGGTGAGGTGAGGCCCGAGT 2280
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GTTATTATCGGAGTTGGACTTGTGAACGACTTGTGAACTGCAGCCGCGCAATCCGTCGAT 2340
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TTGTGTGTGGCTCGCGTGCTTCTTCCAGATCACATTTCAGGTCCCTTCGGTTTGACTGTA 2400
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TGAGATGATTTTTCTGTCGAATGAATTGGCGTATGAGATAATTTTTCTGTCGATTGATTT 2460
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TTCGGTTTGACTGAATGGGATGATTGCACGTTGCCGCAAGGAATATATGGTGTAAGTAAG 2520
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      GTCAAAGTCCTCTGATCTTGGAAAGAATTGGGCAGAAACATATCGTAGGAACAAAACGTG 2580
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      ACACACGCTTGCATTTGTGCTGATGAGAAATGTAGGCATGCAGTTTCAGTTTTTGCATTG 2640
consensus_9599#1      ------------------------------------------------------------
                                                                                  

consensus_9599#0      TACTGATGAGAATGATGTTTGTGATGGTTGCAATGGCTGGCATGTTTG 2688
consensus_9599#1      ------------------------------------------------
                                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)