|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9600#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2149 fasta sequence
[CCCTTCTCTTCTCCCTCTCGATCTCGACATACACTACACACCCTGTTCTTGCAGTACGCCAATTAAACCACCACCTCGTTCCTTTCCCTCATCTGCAAAGATCAAGCTCCACCGGAGTTGACGTACGAGGATGATGATGATGATGAGTTCTCTCTTCACTTGCGTCGTCGCCTCCATTTCGCGGAGGAAGAGGAGATGCGCTGCGACGAGAGCCTAATTAAGGCCACGCCGCCATTGTTGGTGTTGACTGGTGAGCTCGTCGTCGTCGTCGCCGTCGTACCTCCTCCCCGTTGTTCTTCCCTCGCTTGCACGCCGCCGCCGCCATGAGCCACTACACAATGCATGCGCACATCAACTACACCGCCCTGCCGCCGACGTCGCCGCTGCAGCTCCCGCTTCCGTACCTCCCGCCGCCTCCTCCGCCGCCGCAGCCGCCATTGCTGCAGCTCCAGCCGCCGCCGCCGCCGTCGTCGCCGGTGTCATTTGACACGGCGTTCCAGAGCAGGATCAGCCCTAGCATCCTGCTGATAATCTTGATCTTGGCTGTTATTTTCTTCGTCTCCGGGCTCCTGCATCTGCTCGTCCGGTTCATCCTCCGCCCGGCGCCGCGTGACGCCGGCGACGCCGACAGCGGCGACGCGAACGTGACCGCCTTCCAGGGGCAGCTCCAGCAGCTGTTCCACCTCCACGACGCCGGCGTGGACCAGTCCTTCATCGACACGCTGCCGGTGTTCCTCTACGGCGCCGTCGTCGGCGCCGGCAGGAAGGACCCGTTCGACTGCGCGGTCTGCCTCTGCGAGTTCGCCGACGACGACCGCCTCCGGCTCCTCCCCAAGTGCAGCCACGCCTTCCACGTCGACTGCATCGACACGTGGCTGCTGTCGCACTCCACCTGCCCGCTCTGCCGCCGCAGCCTCCTCGCCGACTTCTCCCCCTACGGCGGTGGCTGCAGCCCGCTGCTGTTCGTGCTCGAGTCCGGCTCGGAGGGCTCCATCTCCGATCGCCTCGACGCGGCGTCGTCGGCTCATCTCAGCCTCGTCATGGAGCAGGAGGAAGAAGCAGAGCCGGAACAGAAGCATGCAGAGGCGGCGGAGAAGGCGGACGAGGTGGTCGTCTCCGTCAAGCTTGGCAAGTTTCGGAGTCAGGCCACCGAAGTCGCCGCCGGCGGCGGCTGCGGCGGCAGCAGCAGCGCCAACCCCGAGCAGGACGTGCGGCGTTGCTACTCCATGGGGACGTACGAGTACGTCATGGACGAGAGGTCTCTGCTCCGCGTCGCCGTGAAGCCGCCGGCCAAGAAGCGCCCCACGACGCAGATGCCGGGCCACCGGGTCGCCATGTCGGAGTGCGACTGCCACTCCAAGCGGGAGAGCTTCCGCGGCCTCGACGCGCTGCCCGGCGGCAAGCTCGCGCAGGCGCAGCCGCCGAAGCCGCCGGCCAAGGTGGGGAAGAAGGAGAGCTTCTCCTTCTCCAAGATATGGATGCGCGGCGCGCCGCGGATCAGGAAGGACGGCGCGTCCTCCCGGCGCGCGTCGTCGTTCCGGCTCTCCTCCGTGCTGCAGCGCGCGGCGAGCGACGTCGGGGCAACGGCGGCGCCGAAGCCGCTGCGCCCGGACGTCGTGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGAGCGAGAAGAGCGCGAGCGGCAGCGTCGCGGACTGGGACCTCGAGTCCGCCGCCGCCACGGCGGCCGTCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCGCGCGGCGGACGCTGCTGTGGATCCGAGGACACCTGTGAAATGATCCATCCATGGAAGCATCATAGCTCTTCGTTCTTCTTGTGCATTCCCGCCATTAGATTGATTCATTCATTCACGCGGAGAGTGTGGAGTGGAATCGAAGAAATTCACGAGAAATTTGTGTTGAACGATCTGTGAAGTGAATACTACGCGGTAAAGAATTTAACTACTATTGTTTGCAGAGCATTGGAAATCTTGTGTCATTCTGTGTAGCTTGTACTTTGCATTTACTTGTTTTCAACTGTACATTGCTCCAGCAGCAAGGGTTTTCTTCAGGTTCAGGGTAAATTTCTGGTCTGAAACTGAAACATCACAAAAA]
[+] EMBL AK106866 [CCCTTCTCTTCTCCCTCTCGATCTCGACATACACTACACACCCTGTTCTTGCAGTACGCCAATTAAACCACCACCTCGTTCCTTTCCCTCATCTGCAAAGATCAAGCTCCACCGGAGTTGACGTACGAGGATGATGATGATGATGAGTTCTCTCTTCACTTGCGTCGTCGCCTCCATTTCGCGGAGGAAGAGGAGATGCGCTGCGACGAGAGCCTAATTAAGGCCACGCCGCCATTGTTGGTGTTGACTGGTGAGCTCGTCGTCGTCGTCGCCGTCGTACCTCCTCCCCGTTGTTCTTCCCTCGCTTGCACGCCGCCGCCGCCATGAGCCACTACACAATGCATGCGCACATCAACTACACCGCCCTGCCGCCGACGTCGCCGCTGCAGCTCCCGCTTCCGTACCTCCCGCCGCCTCCTCCGCCGCCGCAGCCGCCATTGCTGCAGCTCCAGCCGCCGCCGCCGCCGTCGTCGCCGGTGTCATTTGACACGGCGTTCCAGAGCAGGATCAGCCCTAGCATCCTGCTGATAATCTTGATCTTGGCTGTTATTTTCTTCGTCTCCGGGCTCCTGCATCTGCTCGTCCGGTTCATCCTCCGCCCGGCGCCGCGTGACGCCGGCGACGCCGACAGCGGCGACGCGAACGTGACCGCCTTCCAGGGGCAGCTCCAGCAGCTGTTCCACCTCCACGACGCCGGCGTGGACCAGTCCTTCATCGACACGCTGCCGGTGTTCCTCTACGGCGCCGTCGTCGGCGCCGGCAGGAAGGACCCGTTCGACTGCGCGGTCTGCCTCTGCGAGTTCGCCGACGACGACCGCCTCCGGCTCCTCCCCAAGTGCAGCCACGCCTTCCACGTCGACTGCATCGACACGTGGCTGCTGTCGCACTCCACCTGCCCGCTCTGCCGCCGCAGCCTCCTCGCCGACTTCTCCCCCTACGGCGGTGGCTGCAGCCCGCTGCTGTTCGTGCTCGAGTCCGGCTCGGAGGGCTCCATCTCCGATCGCCTCGACGCGGCGTCGTCGGCTCATCTCAGCCTCGTCATGGAGCAGGAGGAAGAAGCAGAGCCGGAACAGAAGCATGCAGAGGCGGCGGAGAAGGCGGACGAGGTGGTCGTCTCCGTCAAGCTTGGCAAGTTTCGGAGTCAGGCCACCGAAGTCGCCGCCGGCGGCGGCTGCGGCGGCAGCAGCAGCGCCAACCCCGAGCAGGACGTGCGGCGTTGCTACTCCATGGGGACGTACGAGTACGTCATGGACGAGAGGTCTCTGCTCCGCGTCGCCGTGAAGCCGCCGGCCAAGAAGCGCCCCACGACGCAGATGCCGGGCCACCGGGTCGCCATGTCGGAGTGCGACTGCCACTCCAAGCGGGAGAGCTTCCGCGGCCTCGACGCGCTGCCCGGCGGCAAGCTCGCGCAGGCGCAGCCGCCGAAGCCGCCGGCCAAGGTGGGGAAGAAGGAGAGCTTCTCCTTCTCCAAGATATGGATGCGCGGCGCGCCGCGGATCAGGAAGGACGGCGCGTCCTCCCGGCGCGCGTCGTCGTTCCGGCTCTCCTCCGTGCTGCAGCGCGCGGCGAGCGACGTCGGGGCAACGGCGGCGCCGAAGCCGCTGCGCCCGGACGTCGTGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGAGCGAGAAGAGCGCGAGCGGCAGCGTCGCGGACTGGGACCTCGAGTCCGCCGCCGCCACGGCGGCCGTCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCGCGCGGCGGACGCTGCTGTGGATCCGAGGACACCTGTGAAATGATCCATCCATGGAAGCATCATAGCTCTTCGTTCTTCTTGTGCATTCCCGCCATTAGATTGATTCATTCATTCACGCGGAGAGTGTGGAGTGGAATCGAAGAAATTCACGAGAAATTTGTGTTGAACGATCTGTGAAGTGAATACTACGCGGTAAAGAATTTAACTACTATTGTTTGCAGAGCATTGGAAATCTTGTGTCATTCTGTGTAGCTTGTACTTTGCATTTACTTGTTTTCAACTGTACATTGCTCCAGCAGCAAGGGTTTTCTTCAGGTTCAGGGTAAATTTCTGGTCTGAAACTGAAACATCACAAAAA]
[+] EMBL AU163545 [ CGACATACACTACACACCCTGTTCTTGCAGTACGCCAATTAAACCACCACCTCGTTCCTTTCCCTCATCTGCAAAGATCAAGCTCCACCGGAGTTGACGTACGAGGATGATGATGATGATGAGTTCTCTCTTCACTTGCGTCGTCGCCTCCATTTCGCGGAGGAAGAGGAGATGCGCTGCGACGAGAGCCTAATTAAGGCCACGCCGCCATTGTTGGTGTTGACTGGTGAGCTCGTCGTCGTCGTCGCCGTCGTACCTCCTCCCCGTTGTTCTTCCCTCGCTTGCACGCCGCCGCCGCCATGAGCCACTACACAATGCATGCGCACATCAACTACAACGCCCTGCCGCCGACGTCGCCGCTGCAGCTCCCGTTTCCGTANCTNCCGCCGCCTCCTCCGCCGNCGAAGCCGCCATTGCTGCAGTTCCAGCCGCCGCCGCCGCC ]
consensusID : consensus_9600#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 1735 fasta sequence
[TTTTTCTTCCATCGCCATCACCTGCTGCTGTGTGTCCTCTGTCCTTCTTCATCGCCAATGGCTGCCATGCCAACACCAAGATCCTTCTCCTACCCCTAGCTCATCGCAAAACAAGCTAGAAATCGTCTCTTCTCCCAAGAAAATTCATCTTTGGATCGTAGAGCGTATTTGAAGAATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCCGTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTGCGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGGGGCAGCTGCAGCAGCTGTTCCACCTCCACGACGCCGGCGTCGACCA-GGCCTTCAT-CGAC-GCGCTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGGCGGCGAGGATGGCAAGGACCCGTTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGACGACCAGCTCCGGCTGCTGCCCAAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACACCTGGCTCCTCTCCCACTCCACCTGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTCGCCGACGTGCACCCCCGTCGTCATGGTGCTCGAGTCCGAGAGCTCCCGCGACATGGTCCACGCCGCCGACGATGAGCCAGCCGACGACGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGTGGTCGAGGTGAAGCTTGGGAAGTTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAACGCCATCGCCGGCGAAGGGGATAGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAATGCCAAGGCTGGTGGTCTCGGGCAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGTCATGGACGCGCACGCCTCCCTCCGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGCGGCGGCCTCCAAGTCGCGCCGCCGCGGCGCCATGTCGGAGTGCGAGTTCGGCGCCTCCAAGCGCGGCGAGTCCTCGCTCCGCCTGCCGCCGTTCCGCGCGACGCCGCGCAAGAACCCCGACGACGACGCGGCCGCGGCCGCCGGCGCGAAGCTCGCCAAGGACAGCTTCTCCGTGTCCAAGATCTGGATGGTGCCGTCCAAGAAAGAGCCCGGCGCCGCCGCCGAGAGGCGCGCGGTGTCGTTCCGGTGGCCGGCGGCGAAGGACTGGGACGTCGAGGCCGGGAGCTGCGGCGGGAACAGCGCCGTGTCGTCGGTGGCGGCGGAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTGGGTCGTCGGAGGCAGCAGGCAGCTCAGCAGAGTCGGGAGCTGTTCATGATCACCATTTCGATCATCAAATCCCAAAATGAAACCAAAAAAAAAAAGATGATTCTTTTGTTCAGTTCTTTTACCCCCTCCTTTTGCTTGCTAGGTTATTGGTAGCGAACTAGCGATTGCATCCAACAGCAAGAGAAATTGTAAAACCCATATGCTACGAAGAGAAGAAATTTTCCTTTCATTTTTAACTGCATTTGAGATTTTAAGTCCGGGTTGGTTTCAATTTTCAGCAAAGTGACTCCCTGATCATTACTCGAAAGAAAACATTACCTAT]
[-] EMBL BI801443 [TTTTTCTTCCATCGCCATCACCTGCTGCTGTGTGTCCTCTGTCCTTCTTCATCGCCAATGGCCGCCATGCCAACACCAAGATCCTTCTCCTACCCCTAGCTCATCGCAAAACAAGCTAGAAATCGTCTCTTCTCCCAAGAAAAATCATCTTGGGATCGTAGAGCGTATTTGAAGAATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCCGTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTGCGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGGGGCAGCTGCAGCAG TGTTCCA CTCCACGACGCCGGCGTCGACCAGGGCCTTCATCCGACAGCGC ]
[+] EMBL AK064699 [ TTCTTCCATCGCCATCACCTGCTGCTGTGTGTCCTCTGTCCTTCTTCATCGCCAATGGCTGCCATGCCAACACCAAGATCCTTCTCCTACCCCTAGCTCATCGCAAAACAAGCTAGAAATCGTCTCTTCTCCCAAGAAAATTCATCTTTGGATCGTAGAGCGTATTTGAAGAATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCCGTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTGCGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGGGGCAGCTGCATCAGCTGTTCCACCTCCACGACGCCGGCGTCGACCA GGCCTTCAT CGAC GCGCTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGGCGGCGAGGATGGCAAGGACCCGTTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGACGACCAGCTCCGGCTGCTGCCCAAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACACCTGGCTCCTCTCCCACTCCACCTGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTCGCCGACGTGCACCCCCGTCGTCATGGTGCTCGAGTCCGAGAGCTCCCGCGACATGGTCCACGCCGCCGACGATGAGCCAGCCGACGACGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGTGGTCGAGGTGAAGCTTGGGAAGTTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAACGCCATCGCCGGCGAAGGGGATAGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAATGCCAAGGCTGGTGGTCTCGGGCAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGTCATGGACGCGCACGCCTCCCTCCGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGCGGCGGCCTCCAAGTCGCGCCGCCGCGGCGCCATGTCGGAGTGCGAGTTCGGCGCCTCCAAGCGCGGCGAGTCCTCGCTCCGCCTGCCGCCGTTCCGCGCGACGCCGCGCAAGAACCCCGACGACGACGCGGCCGCGGCCGCCGGCGCGAAGCTCGCCAAGGACAGCTTCTCCGTGTCCAAGATCTGGATGGTGCCGTCCAAGAAAGAGCCCGGCGCCGCCGCCGAGAGGCGCGCGGTGTCGTTCCGGTGGCCGGCGGCGAAGGACTGGGACGTCGAGGCCGGGAGCTGCGGCGGGAACAGCGCCGTGTCGTCGGTGGCGGCGGAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTGGGTCGTCGGAGGCAGCAGGCAGCTCAGCAGAGTCGGGAGCTGTTCATGATCACCATTTCGATCATCAAATCCCAAAATGAAACCAAAAAAAAAAAGATGATTCTTTTGTTCAGTTCTTTTACCCCCTCCTTTTGCTTGCTAGGTTATTGGTAGCGAACTAGCGATTGCATCCAACAGCAAGAGAAATTGTAAAACCCATATGCTACGAAGAGAAGAAATTTTCCTTTCATTTTTAACTGCATTTGAGATTTTAAGTCCGGGTTGGTTTCAATTTTCAGCAAAGTGACTCCCTGATCATTACTCGAAAGAAAACATTACCTAT]
[+] EMBL AK101056 [ TCCTTCTTCATCGCCAATGGCTGCCATGCCAACACCAAGATCCTTCTCCTACCCCTAGCTCATCGCAAAACAAGCTAGAAATCGTCTCTTCTCCCAAGAAAATTCATCTTTGGATCGTAGAGCGTATTTGAAGAATGAGCAATTCGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGATTGACGGCGTGGAGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCCGTCTTGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTGCGGCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGGGGCAGCTGCAGCAGCTGTTCCACCTCCACGACGCCGGCGTCGACCA GGCCTTCAT CGAC GCGCTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGGCGGCGAGGATGGCAAGGACCCGTTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGACGACCAGCTCCGGCTGCTGCCCAAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACACCTGGCTCCTCTCCCACTCCACCTGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTCGCCGACGTGCACCCCCGTCGTCATGGTGCTCGAGTCCGAGAGCTCCCGCGACATGGTCCACGCCGCCGACGATGAGCCAGCCGACGTCGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGTGGTCGAGGTGAAGCTTGGGAAGTTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAACGCCATCGCCGGCGAAGGGGATAGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAATGCCAAGGCTGGTGGTCTCGGGCAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGTCATGGACGCGCACGCCTCCCTCCGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGCGGCGGCCTCCAAGTCGCGCCGCCGCGGCGCCATGTCGGAGTGCGAGTTCGGCGCCTCCAAGCGCGGCGAGTCCTCGCTCCGCCTGCCGCCGTTCCGCGCGACGCCGCGCAAGAACCCCGACGACGACGCGGCCGCGGCCGCCGGCGCGAAGCTCGCCAAGGACAGCTTCTCCGTGTCCAAGATCTGGATGGTGCCGTCCAAGAAAGAGCCCGGCGCCGCCGCCGAGAGGCGCGCGGTGTCGTTCCGGTGGCCGGCGGCGAAGGACTGGGACGTCGAGGCCGGGAGCTGCGGCGGGAACAGCGCCGTGTCGTCGGTGGCGGCGGAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTGGGTCGTCGGAGGCAGCAGGCAGCTCAGCAGAGTCGGGAGCTGTTCATGATCACCATTTCGATCATCAAATCTCAAAATGAAACCAAAAAAAAAAAGATGATTCCTTTGTTCAGTTCTTTTACCCCCTCCTTTTGCTTGCTAGGTTATTGGTAGCGAACTAGCGATTGCATCCAACAGCAAGAGAAATTGTAAAACCCATATGCTACGAAGAGAAGAAA ]
consensusID : consensus_9600#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 529 fasta sequence
[GATTATCAGCACGATGCTAGTCATGATCGTGGTCGGGTCCTCCGTGTGAAATTACTCGTTCGGGGTCTCCTCCGTCGTCCAGCGGACGTGCAGCAATGTCGGGTCAACCGCGGCACGAAACCCCCTGCGCCCGGAAGTCGGGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGACAGAGAAGAGCGCGAGCGGCAGCGTCGCGGAGTGGGACCTGGAGTCCGCCGCCGCCACGGCGGCCGTCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCGCGCGGCGGACGCTGCTGTGGATCCGAGGTCACCTGTGAAATGATCCATCCATGGAAGCATCATAGCTGTTCGTTCTTCTTGTGCATTCCCGCCATTAGATTGATTCATTCATTCACGCGGAGAGTGTGGAGTGGAATCGAAGAAATTCACGAGAAATTTGTGTTGAACGATCTGTGAAGTGAATACTTCACGGGAAAGAATTTAACTACTATTGT]
[-] EMBL CB685018 [GATTATCAGCACGATGCTAGTCATGATCGTGGTCGGGTCCTCCGTGTGAAATTACTCGTTCGGGGTCTCCTCCGTCGTCCAGCGGACGTGCAGCAATGTCGGGTCAACCGCGGCACGAAACCCCCTGCGCCCGGAAGTCGGGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGACAGAGAAGAGCGCGAGCGGCAGCGTCGCGGAGTGGGACCTGGAGTCCGCCGCCGCCACGGCGGCCGTCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCGCGCGGCGGACGCTGCTGTGGATCCGAGGTCACCTGTGAAATGATCCATCCATGGAAGCATCATAGCTGTTCGTTCTTCTTGTGCATTCCCGCCATTAGATTGATTCATTCATTCACGCGGAGAGTGTGGAGTGGAATCGAAGAAATTCACGAGAAATTTGTGTTGAACGATCTGTGAAGTGAATACTTCACGGGAAAGAATTTAACTACTATTGT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9600#0 CCCTTCTCTTCTCCCTCTCGATCTCGACATACACTACACACCCTGTTCTTGCAGTACGCC 60
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ------------------------------------------------------------
consensus_9600#0 AATTAAACCACCACCTCGTTCCTTTCCCTCATCTGCAAAGATCAAGCTCCACCGGAGTTG 120
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ------------------------------------------------------------
consensus_9600#0 ACGTACGAGGATGATGATGATGATGAGTTCTCTCTTCACTTGCGTCGTCGCCTCCATTTC 180
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ------------------------------------------------------------
consensus_9600#0 GCGGAGGAAGAGGAGATGCGCTGCGACGAGAGCCTAATTAAGGCCACGCCGCCATTGTTG 240
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 -------------------------------------------------------TTTTT 5
consensus_9600#0 GTGTTGACTGGTGAGCTCGTCGTCGTCGTCGCCGTCGTACCTCCTCCCCGTTGTTCTTCC 300
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CTTCCATCGCCATCACCTGCTGCTGTGTGTCCTCTGTCCTTCTTCATCGCCAATGGCTGC 65
consensus_9600#0 CTCGCTTGCACGCCGCCGCCGCCATGAGCCACTACACAATGCATGCGCACATCAACTACA 360
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CATGCCAACACCAAGATCCTTCTCCTACCCCTAGCTCATCGCAAAACAAGCTAGAAATCG 125
consensus_9600#0 CCGCCCTGCCGCCGACGTCGCCGCTGCAGCTCCCGCTTCCGTACCTCCCGCCGCCTCCTC 420
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TCTCTTCTCCCAAGAAAATTCATCTTTGGATCGTAGAGCGTATTTGAAGAATGAGCAATT 185
consensus_9600#0 CGCCGCCGCAGCCGCCATTGCTGCAGCTCCAGCCGCCGCCGCCGCCGTCGTCGCCGGTGT 480
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CGACGTGGCAGCCGTCGCCGCCGCAGACTCCGGCGGCGGCGGCGTCGTCGGCGTCGGGGA 245
consensus_9600#0 CATTTGACACGGCGTTCCAGAGCAGGATCAGCCCTAGCATCCTGCTGATAATCTTGATCT 540
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TTGACGGCGTGG------AGAACAAGATAAGCCCGAGCATCGTGTTCATCGTGGCCGTCT 299
consensus_9600#0 TGGCTGTTATTTTCTTCGTCTCCGGGCTCCTGCATCTGCTCGTCCGGTTCATCCTCCGCC 600
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TGGCGATCGTGTTCTTCGTGTGCGGGCTGCTGCACCTGCTGGTGCGGCACCTGCTGCG-- 357
consensus_9600#0 CGGCGCCGCGTGACGCCGGCGACGCCGACAGCGGCGACGCGAACGTGACCGCCTTCCAGG 660
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ----GCTGCACCGGCAGCGGAGGGCGAGGGAGGACGCCGAGAGCGCGACGGCGTTCGAGG 413
consensus_9600#0 GGCAGCTCCAGCAGCTGTTCCACCTCCACGACGCCGGCGTGGACCAGTCCTTCATCGACA 720
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 GGCAGCTGCAGCAGCTGTTCCACCTCCACGACGCCGGCGTCGACCAGGCCTTCATCGACG 473
consensus_9600#0 CGCTGCCGGTGTTCCTCTACGGCGCCGTCGTCGGCGCCGGCAGG---------AAGGACC 771
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CGCTCCCGGTGTTCCTGTACCGGAACGTCGTCGGCGTCGGCGGCGAGGATGGCAAGGACC 533
consensus_9600#0 CGTTCGACTGCGCGGTCTGCCTCTGCGAGTTCGCCGACGACGACCGCCTCCGGCTCCTCC 831
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CGTTCGACTGCGCTGTCTGCCTGTGCGAGTTCGCCGCCGACGACCAGCTCCGGCTGCTGC 593
consensus_9600#0 CCAAGTGCAGCCACGCCTTCCACGTCGACTGCATCGACACGTGGCTGCTGTCGCACTCCA 891
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CCAAGTGCAGCCACGCGTTCCACCTCGAGTGCATCGACACCTGGCTCCTCTCCCACTCCA 653
consensus_9600#0 CCTGCCCGCTCTGCCGCCGCAGCCTCCTCGCCGACTTCTCCCCCTACGGCGGTGGCTGCA 951
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CCTGCCCGCTCTGCCGGAGGAGCCTCCTCGCCGAGCTCTCGCCG---------ACGTGCA 704
consensus_9600#0 GCCCGCTGCTGTTCGTGCTCGAGTCCGGCTCGGAGGGCTCCATCTCCGATCGCCTCGACG 1011
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 CCCCCGTCGTCATGGTGCTCGAGTCCGA---GAGCTCCCGCGACATGGTCCACGCCGCCG 761
consensus_9600#0 CGGCGTCGTCGGCTCATCTCAGCCTCGTCATGGAGCAGGAGGAAGAAGCAGAGCCGGAAC 1071
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ACGATGAGCCAGCCGACGACGGTGGCGAAGACGCGCCGGGAGCGGAGGAGGTGGTCGAGG 821
consensus_9600#0 AGAAGCATGCAGAGGCGGCGGAGAAGGCGGACGAGGTGGTCGTCTCCGTCAAGCTTGGCA 1131
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TGAAGCTTGGGAAGTTCATGTGCGTCGAAGGCAACGTCTTCTTCAACGTCAA---CGCCA 878
consensus_9600#0 AGTTTCGGAGTCAGGCCACCGAAGTCGCCGCCGGCGGCGGCTGCGGCGGCAGCAGCAGCG 1191
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TCGCCGGCGAAGGGGATAGAGCCGGCACGAGCAGCAACGGCAATGGCGACGCCAATGCCA 938
consensus_9600#0 CCAACCCCGAGCAGGACGTGCGGCGTTGCTACTCCATGGGGACGTACGAGTACGTCATGG 1251
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 AGGCTGGTGGTCTCGGGCAAAGACGGTGCCATTCCATGGGATCCTACGAGTACGTCATGG 998
consensus_9600#0 ACGAGAGGTCTCTGCTCCGCGTCGCCGTGAAGCCGCCGGCCAAGAAGCGCCCCACGACGC 1311
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ACGCGCACGCCTCCCTCCGCGTGTCCATCAAGCCGCCGAGGAAGAAGCCGGCGGCGGCG- 1057
consensus_9600#0 AGATGCCGGGCCACCGGGTCGCCATGTCGGAGTGCGACTGCCACTCCAAGCGGGAGAGCT 1371
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 --------------------GCCTCCAAGTCGCGCCGCCGCGGCGCCATGTCGGAGTGCG 1097
consensus_9600#0 TCCGCGGCCTCGACGCGCTGCCCGGCGGCAAGCTCGCGCAGGCGCAGCCGCCGAAGCCGC 1431
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 AGTTCGGC---------------GCCTCCAAGCGCGGCGAGTCCTCGCTCCGCCTGCCGC 1142
consensus_9600#0 CGGCCAAGGTGGGGAAGAAGGAGAGCTTCTCCTTCTCCAAGATATGGATGCGCGGCGCGC 1491
consensus_9600#2 ----------------------------------------------GATTATCAGCACGA 14
consensus_9600#1 CGTTCCGCGCGACGCCGCGCAAGAACCCCGACGACGACGCGGCCGCGGCCGCCGGCGCGA 1202
* * ** **
consensus_9600#0 CGCGGATCAGGAAGGACGGCGCGTCCTCCCGGCGCGCGTCGTCGTTCCGGCTCTCCTCCG 1551
consensus_9600#2 TGCTAGTCATGATCGTGGTCGGGTCCTCCGTGTGAAATTACTCGTTCGGGGTCTCCTCCG 74
consensus_9600#1 AGCTCGCCAAG------GACAGCTTCTCCGTGTCCAAGATCTGGAT---GGTGCCGTCCA 1253
** ** * * * * **** * * * * * * * ***
consensus_9600#0 TGCTGCAGCGCGCGGCGAGCGACGTCGGGGCAACGGCGGCGCCGAAGCCGCTGCGCCCGG 1611
consensus_9600#2 TCGTCCAGCGGACGTGCAGCAATGTCGGGTCAACCGCGGCACGAAACCCCCTGCGCCCGG 134
consensus_9600#1 AGAAAGAGC---CCGGCGCCGCCGCCGAGAGGCGCGCGGTGTCG---TTCCGGTGGCCGG 1307
*** * * * ** * **** * * * ****
consensus_9600#0 ACGTCGTGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGAGCGAGA 1671
consensus_9600#2 AAGTCGGGAGCCCCGTCACGGAGTCGGAGTACAACGTGTCGGCGTGGGACAAGACAGAGA 194
consensus_9600#1 CGGCGAAGGACTGGGACGTCGAGGCCGGGAGCTGCG-----GCG-GGAACAGCGCCGTGT 1361
* * * * * *** * * * * ** *** ** *** * *
consensus_9600#0 AGAGCGCGAGCGGCAGCGTCGCGGACTGGGACCTCGAGTCCGCCGCCGCCACGGCGGCCG 1731
consensus_9600#2 AGAGCGCGAGCGGCAGCGTCGCGGAGTGGGACCTGGAGTCCGCCGCCGCCACGGCGGCCG 254
consensus_9600#1 CGT-CGGTGGCGGCGGAGGAGCGGCCGTCGTTCGCGAGGAGGACGCTGCTCTGG--GTCG 1418
* ** ***** * * **** * * *** * *** ** ** * **
consensus_9600#0 TCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCG 1791
consensus_9600#2 TCCCCGGCGCAGGCGCCGGCAACGGGCTCAGCTCGAGGGCCGACGAGGCGCCGTCGTTCG 314
consensus_9600#1 TCGGAGGCA-----GCAGGCAGCTCAGCAGAGTCGGGAGCTGTTCATGATCACCATTTCG 1473
** *** ** **** * *** * ** * * * * ****
consensus_9600#0 CGCGGCGGACGCTGCTGTGGATCCGAGGACACCTGTGAAATGATCCATCCATGGAAGCAT 1851
consensus_9600#2 CGCGGCGGACGCTGCTGTGGATCCGAGGTCACCTGTGAAATGATCCATCCATGGAAGCAT 374
consensus_9600#1 ATCATCAAATCCCAAAATGAAACCAAAAAAA---AAAAGATGATTCTTTTGTTCAGTTCT 1530
* * * * ** * ** * * * ***** * * * * *
consensus_9600#0 CATAGCTCTTCGTTCTTCTTG-TGCATTCCCGCCATTAGATTGATTCATTCATTCACGCG 1910
consensus_9600#2 CATAGCTGTTCGTTCTTCTTG-TGCATTCCCGCCATTAGATTGATTCATTCATTCACGCG 433
consensus_9600#1 TTTACCCCCTCCTTTTGCTTGCTAGGTTATTGGTAGCGAACTAGCGATTGCATCCAACAG 1590
** * ** ** * **** * ** * * * * * *** ** *
consensus_9600#0 GAGAGTGTGGAGTGGAATCGAAGAAATTC----ACGAGAAATTTGTGTTGAACGATCTG- 1965
consensus_9600#2 GAGAGTGTGGAGTGGAATCGAAGAAATTC----ACGAGAAATTTGTGTTGAACGATCTG- 488
consensus_9600#1 CAAGAGAAATTGTAAAACCCATATGCTACGAAGAGAAGAAATTTTCCTTTCATTTTTAAC 1650
* ** ** * * * * * ******** ** * *
consensus_9600#0 TGAAGTGAATACTACGCGGTAAAGAATTTAACTACTATTGTTTGCAGAGCATTGGAAATC 2025
consensus_9600#2 TGAAGTGAATACTTCACGGGAAAGAATTTAACTACTATTGT------------------- 529
consensus_9600#1 TGCATTTGAGATTTTAAGTCCGGG---TTGGTTTCAATTTTCAGCAAAGTGACTCCCTGA 1707
** * * * * * * * ** * * *** *
consensus_9600#0 TTGTGTCATTCTGTGTAGCTTGTACTTTGCATTTACTTGTTTTCAACTGTACATTGCTCC 2085
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 TCATTACTCGAAAGAAAACATTACCTAT-------------------------------- 1735
consensus_9600#0 AGCAGCAAGGGTTTTCTTCAGGTTCAGGGTAAATTTCTGGTCTGAAACTGAAACATCACA 2145
consensus_9600#2 ------------------------------------------------------------
consensus_9600#1 ------------------------------------------------------------
consensus_9600#0 AAAA 2149
consensus_9600#2 ----
consensus_9600#1 ----
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||