cluster # 9614

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Oryza sativa
cluster # 9614 cluster # 9614 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9614#0 length = 556 sequences # 6

consensusID : consensus_9614#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 556
fasta sequence

                              [ATTCTATACTCGACAAGGGATACTGCAAGAATGGTGAGCACTGCAACTTTTCCCA-TTCAATACCGAATGATGGATATCCATCAAGAAACAGTCGGCACTTCGATAGGCAAAATTCAGGCAACGAGAGACGGTATG-ACA-GGCAAAACGAGAGGACTGATCGGCA-GTTTGATCGGCAATCGTCAGGCAACGAGAGGCGTGATGACAGGCACAACGGCA-GGGATAGTGACAGGCATG-ATGACAGGCTGACTGATACTAGGTCACAATCAAGAGAGAGGCAGTAGATCCGTTCTCAGTTTCATCTGTTGTATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCTGAATTGTC-ATGTAGAA-C--GTTGTAGTTATAAATC-ATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACA-AGCAGTAATACATTCTGAATAAATCCTGGTGTCAGGTAGGAAAAAAATACTAAAGCACCCCCCCTGGTGATATGCTCCAAAAAAAAAA]

[+] EMBL AK062804             [ATTCTATACTCGACAAGGGATACTGCAAGAATGGTGAGCACTGCAACTTTTCCCA TTCAATACCGAATGATGGATATCCATCAAGAAACAGTCGGCACTTCGATAGGCAAAATTCAGGTAACGAGAGACGGTACG ACA GGCAAAACGAGAGGACTGATCGGCA GTTTGATCGGCAATCGTCAGGCAACGAGAGGCGTGATGACAAGCACAACGGCA GGGATAGTGACAGGCATG ATGACAGGCTGACTGATACTAGGTCACAATCAAGAGAGAGGCAGTAGATCCGTTCTCAGTTTCATCTGTTGTATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCAGAATTGTC ATGTAGAA CA GTTGTAGTTATAAATC ATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACA AGCAGTAATACATTCTGAATAAATCCTGGT                                                          ]
[+] EMBL BI808206             [                                                   CCCACTTCAATACCGAATGATGGATATCCATCAAGAAACAGTCGGCACTTCGATA GCCAAATTCAGGCAACGAGAGACGGTATG ACACGGCAAAACGAGAGGACTGATC GCACGTTTGATCGGCAATCGTCAGGCAACGAGAGGCGTGATGACAGGCACAACGGCACGGGATAGTGACAGGCATG ATGACAGGCTGACTGATACTAGGTCAC ATCAAGAGAGAGGCAGTAGATCCGTTCTCAGTTTCATCTGTTGTATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCTGAATTGTC ATGTAGAA C  GTTGTAGTTATAAATC ATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACA AGCAGTAATACATTCTGAATAAATCCTGGTGTCAGGTAGGAAATGGGTACTAAAGCACCCCCCCTGGTGATATGCTCCAAAAAAAAAA]
[+] EMBL BQ908909             [                                                    CCA TTCAATACCGAATGATGGATATCCATCAAGNAACAGTCGGCACTTCGATAGGCNAAATTCAGGCAACGAGAGACGGTATGTACA GGCNAAACGAGAGGACTGATCGGCA GTTTGATCGGCAATCGTCAGGCAACGAGAGGCGTGATGACAGGCACAACGGCA GGGATAGTGACAGGCATGTATGACAGGCTGACTGATACTAGGTCACAATCAAGAGAGAGGCAGTAGATCCGTTCTCAGTTTCATCTGTTGTATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTNGCATCTCCTCTGAATTGTC ATGTAGAA CCNGTTGTAGTTATAAATC ATGTGCATCCTAa                                                                                                                 ]
[+] EMBL AU166562             [                                                                                                                                                                                                                                                                                   nAGAGGCAGTAGATCCGTTNTCAGTTTCATCTGTTGAATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTTTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCANAATTGTCNATGTAGAA CTAGTTGTAGTTATAAATCAATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACA AGCAGTAATACATTNTGAATAAAaaaaaaa                                                          ]
[+] EMBL BI798582             [                                                                                                                                                                                                                                                                                                                                      TGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCTGAATTGTC ATGTAGAACC  GTTGTAGTTATAAATC ATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACACAGCAGTAATACCTTCTGAATAAATCCTGGTGTCAGGTAGGAAAAAAAaaa                                      ]
[+] EMBL BI799059             [                                                                                                                                                                                                                                                                                                                                      TGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTTTCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCTGAATTGTC ATGTAGAACC  GTTGTAGTTATAAATC ATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACC ACCAGTAATACCTTCTGAATAAATCCTGGTGTCAGGTAAAAAAAAAA                                         ]




>consensus_9614#0
ATTCTATACTCGACAAGGGATACTGCAAGAATGGTGAGCACTGCAACTTTTCCCATTCAA
TACCGAATGATGGATATCCATCAAGAAACAGTCGGCACTTCGATAGGCAAAATTCAGGCA
ACGAGAGACGGTATGACAGGCAAAACGAGAGGACTGATCGGCAGTTTGATCGGCAATCGT
CAGGCAACGAGAGGCGTGATGACAGGCACAACGGCAGGGATAGTGACAGGCATGATGACA
GGCTGACTGATACTAGGTCACAATCAAGAGAGAGGCAGTAGATCCGTTCTCAGTTTCATC
TGTTGTATCCTCCCTTTTGTTGTAGTTCCTCAGTAGACATCCATATCACATATGCATGTT
TCTGAACTTGGTGCATTGTAGCGAGTTGCATCTCCTCTGAATTGTCATGTAGAACGTTGT
AGTTATAAATCATGTGCATCCTACCCTTCTGTTTCTTGCTTCGGAACAAGCAGTAATACA
TTCTGAATAAATCCTGGTGTCAGGTAGGAAAAAAATACTAAAGCACCCCCCCTGGTGATA
TGCTCCAAAAAAAAAA

clustalw multiple alignements is not computed in this case