These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3210 fasta sequence [TTGTCTTATTTGGTAACAAGGACCGTCTGCACATCGGAAAGGAGTTGTCAAAAGTATATTTGGATGATCGTGTCCATAAGCTGCTGAGGTATTTCAAACGAGAAGATGGTTGGAAGGCACGTGTGGATTCTGTCATGAAATTCCTTATGAATTGCATTTCTCGTTACCAAATGTCCCTAGATATACAGCAGGCAAGCAGTGATGGATGCAATCTTACCTTTAAGAAGTATTTCACAAGTAAATTCAGCACATTAGTAAAAGAATTAGCAAGGTGTATTGATACATTCTTTGATCATCTTCCAACTGATTCCCTGGGCAGGAATTTGGACAGGATGATGTTTGCCAAAAGTTTGTTAGATAAATTGCAACAACTGCTGTGTGCAGATGATGTCTCTGATGAGCTTCTTTTCACAATTTTCAAGCCTTCCGATGAACCTATTGACTCTTTTGATAGCCATGACCAGACAGATGATGCAACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATCTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTAGTCCATGACTCAAAACGACGTGGATGTTTCTTTAATGCCCTTGACGACAAGAATTTAGCAGAAATAATTATGCATGCAACCAAGGAGGGAGAGCAGAGGAACCAAAGAGAACAGAGGAGTGCCCACAATGCAAATCGATGGTCATCAGGGTCATCGAGGCATGACATAATTGCTGCTGGCAACAGTCGACCAATGAGATGGAGTCACTTTCCAGGTTCTGGAAACACAAGGAGAAGCAATGGCCACGATTCACGACTAAATGTGTGTCACACAAAAGAGGACATGCATAGAACACACTTTCAGCAACGCAAGTCCTATAGTGGTGACTATTCACAAGTTGCTCCTCCTAATCAATATTGGCACAATGGCAACAGACCATCCCGTGGCAGTTATGGTTATCTGGAAGTGTTTAGAGAACATCCAAATCATCATTCTGGTCAGGACTCACGTACTAGAAGTTATCATGAAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATGAACGGACCAATAACCATTGGATGGAAGAACCTCATCAGGTGCAGAATGCCACCTGTAACATGCCAGTTACTATGCAGCAAGGGATGAAAAGAAACTGGTGCGAAGCAGAAGCATCAGATTCACCCCAGCAGGTCAATGCAAAAATAAGATCCGAAAGTGCAGATCGACCTCATTTGCATGACGAACATGGAGGTTATGGAACTGCATCTCACCAACTGCCTGCAATTAAGCCCGAAGATGTTTCCGAGCAGCAGTGTGAGATGAAAACAGACAGCTATGAGGCAGAAGCATCAGAATCACCAAATGACAGCACAAGAGTAAGGCCTGAAAGTGTAGAGCAACCTTATTGTCAGGCACAGGGTGACAGTTCTGGAGCTGCTTCCCAGGAACCGGTTATCCCTGAGCAGAGAGGGATGTCAGGTGACTTGTGCGAAGCAGTATGCCACCAGAGCAACACGTCAGGTTCACCAAACAGGGGCAGTACTGAAGTAACACTCGAAGGTGCAGAACAACCTCATTGCCAGGCGCAGCCTGACGGTTCGGGAGTTGCTTCAAATGAAGCGCCTGTTCCTGAACAGCGATGGACGGAAGGGGACTTGGGTGAAGCAGCAGAACCTGGCCAGGGCAATGCAGAAAATAAAGCTGAAAGTGCAGAGGCAGATAGCTAGACTTTTGAGATCAGATACAGACATATAGATTTCCAGTCCTTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCTTTTGGTTTATATCCCCAAAATGTGTATAAGCAAGCACGTGGTGTGTAAATCTTTTTGGCTCCTCGACAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATACGTAAAAGACTAGAAGGTAGCTCAATAAAAAGGAAAANAAAGCGTAGAATTTTTTGGGCGAAAAAAAAAAAAAAAAAAA] [+] EMBL AK103560 [TTGTCTTATTTGGTAACAAGGACCGTCTGCACATCGGAAAGGAGTTGTCAAAAGTATATTTGGATGATCGTGTCCATAAGCTGCTGAGGTATTTCAAACGAGAAGATGGTTGGAAGGCACGTGTGGATTCTGTCATGAAATTCCTTATGAATTGCATTTCTCGTTACCAAATGTCCCTAGATATACAGCAGGCAAGCAGTGATGGATGCAATCTTACCTTTAAGAAGTATTTCACAAGTAAATTCAGCACATTAGTAAAAGAATTAGCAAGGTGTATTGATACATTCTTTGATCATCTTCCAACTGATTCCCTGGGCAGGAATTTGGACAGGATGATGTTTGCCAAAAGTTTGTTAGATAAATTGCAACAACTGCTGTGTGCAGATGATGTCTCTGATGAGCTTCTTTTCACAATTTTCAAGCCTTCCGATGAACCTATTGACTCTTTTGATAGCCATGACCAGACAGATGATGCAACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATCTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTAGTCCATGACTCAAAACGACGTGGATGTTTCTTTAATGCCCTTGACGACAAGAATTTAGCAGAAATAATTATGCATGCAACCAAGGAGGGAGAGCAGAGGAACCAAAGAGAACAGAGGAGTGCCCACAATGCAAATCGATGGTCATCAGGGTCATCGAGGCATGACATAATTGCTGCTGGCAACAGTCGACCAATGAGATGGAGTCACTTTCCAGGTTCTGGAAACACAAGGAGAAGCAATGGCCACGATTCACGACTAAATGTGTGTCACACAAAAGAGGACATGCATAGAACACACTTTCAGCAACGCAAGTCCTATAGTGGTGACTATTCACAAGTTGCTCCTCCTAATCAATATTGGCACAATGGCAACAGACCATCCCGTGGCAGTTATGGTTATCTGGAAGTGTTTAGAGAACATCCAAATCATCATTCTGGTCAGGACTCACGTACTAGAAGTTATCATGAAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATGAACGGACCAATAACCATTGGATGGAAGAACCTCATCAGGTGCAGAATGCCACCTGTAACATGCCAGTTACTATGCAGCAAGGGATGAAAAGAAACTGGTGCGAAGCAGAAGCATCAGATTCACCCCAGCAGGTCAATGCAAAAATAAGATCCGAAAGTGCAGATCGACCTCATTTGCATGACGAACATGGAGGTTATGGAACTGCATCTCACCAACTGCCTGCAATTAAGCCCGAAGATGTTTCCGAGCAGCAGTGTGAGATGAAAACAGACAGCTATGAGGCAGAAGCATCAGAATCACCAAATGACAGCACAAGAGTAAGGCCTGAAAGTGTAGAGCAACCTTATTGTCAGGCACAGGGTGACAGTTCTGGAGCTGCTTCCCAGGAACCGGTTATCCCTGAGCAGAGAGGGATGTCAGGTGACTTGTGCGAAGCAGTATGCCACCAGAGCAACACGTCAGGTTCACCAAACAGGGGCAGTACTGAAGTAACACTCGAAGGTGCAGAACAACCTCATTGCCAGGCGCAGCCTGACGGTTCGGGAGTTGCTTCAAATGAAGCGCCTGTTCCTGAACAGCGATGGACGGAAGGGGACTTGGGTGAAGCAGCAGAACCTGGCCAGGGCAATGCAGAAAATAAAGCTGAAAGTGCAGAGGCAGATAGCTAGACTTTTGAGATCAGATACAGACATATAGATTTCCAGTCCTTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCTTTTGGTTTATATCCCCAAAATGTGTATAAGCAAGCACGTGGTGTGTAAATCTTTTTGGCTCCTCGACAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATACGTAAAAGACTAGAAGGTAGCTCAATAAAAAGGAA ] [+] EMBL CF306545 [ AACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATTTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATG ] [+] EMBL CB641256 [ AAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTA ] [+] EMBL OSR3073A [ AAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATTGACGGACCAATAACCATTGGGTGGGAGGACCTCATCAGGTGCAGGATGCCACCTGTAACATG ] [+] EMBL OSR29391A [ AAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCAC ] [+] EMBL AU173431 [ GCTAGACTTTTNAGATCAGATACNGACATATAGATTTCCNGTCCNTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCNTTTGGTTTATATCCCCNAAATGTGTATAAGCAAGCACGTGGTGTGTNAATNTTTTTGGCTCCTCGNCAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATATGTNAAAGACTAGAAGGTAGCTCAATNAAAAGGAAAANAAAGCGTAGAATTTTTTGGGCGAAAAAAAAAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||