|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9631#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3210 fasta sequence
[TTGTCTTATTTGGTAACAAGGACCGTCTGCACATCGGAAAGGAGTTGTCAAAAGTATATTTGGATGATCGTGTCCATAAGCTGCTGAGGTATTTCAAACGAGAAGATGGTTGGAAGGCACGTGTGGATTCTGTCATGAAATTCCTTATGAATTGCATTTCTCGTTACCAAATGTCCCTAGATATACAGCAGGCAAGCAGTGATGGATGCAATCTTACCTTTAAGAAGTATTTCACAAGTAAATTCAGCACATTAGTAAAAGAATTAGCAAGGTGTATTGATACATTCTTTGATCATCTTCCAACTGATTCCCTGGGCAGGAATTTGGACAGGATGATGTTTGCCAAAAGTTTGTTAGATAAATTGCAACAACTGCTGTGTGCAGATGATGTCTCTGATGAGCTTCTTTTCACAATTTTCAAGCCTTCCGATGAACCTATTGACTCTTTTGATAGCCATGACCAGACAGATGATGCAACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATCTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTAGTCCATGACTCAAAACGACGTGGATGTTTCTTTAATGCCCTTGACGACAAGAATTTAGCAGAAATAATTATGCATGCAACCAAGGAGGGAGAGCAGAGGAACCAAAGAGAACAGAGGAGTGCCCACAATGCAAATCGATGGTCATCAGGGTCATCGAGGCATGACATAATTGCTGCTGGCAACAGTCGACCAATGAGATGGAGTCACTTTCCAGGTTCTGGAAACACAAGGAGAAGCAATGGCCACGATTCACGACTAAATGTGTGTCACACAAAAGAGGACATGCATAGAACACACTTTCAGCAACGCAAGTCCTATAGTGGTGACTATTCACAAGTTGCTCCTCCTAATCAATATTGGCACAATGGCAACAGACCATCCCGTGGCAGTTATGGTTATCTGGAAGTGTTTAGAGAACATCCAAATCATCATTCTGGTCAGGACTCACGTACTAGAAGTTATCATGAAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATGAACGGACCAATAACCATTGGATGGAAGAACCTCATCAGGTGCAGAATGCCACCTGTAACATGCCAGTTACTATGCAGCAAGGGATGAAAAGAAACTGGTGCGAAGCAGAAGCATCAGATTCACCCCAGCAGGTCAATGCAAAAATAAGATCCGAAAGTGCAGATCGACCTCATTTGCATGACGAACATGGAGGTTATGGAACTGCATCTCACCAACTGCCTGCAATTAAGCCCGAAGATGTTTCCGAGCAGCAGTGTGAGATGAAAACAGACAGCTATGAGGCAGAAGCATCAGAATCACCAAATGACAGCACAAGAGTAAGGCCTGAAAGTGTAGAGCAACCTTATTGTCAGGCACAGGGTGACAGTTCTGGAGCTGCTTCCCAGGAACCGGTTATCCCTGAGCAGAGAGGGATGTCAGGTGACTTGTGCGAAGCAGTATGCCACCAGAGCAACACGTCAGGTTCACCAAACAGGGGCAGTACTGAAGTAACACTCGAAGGTGCAGAACAACCTCATTGCCAGGCGCAGCCTGACGGTTCGGGAGTTGCTTCAAATGAAGCGCCTGTTCCTGAACAGCGATGGACGGAAGGGGACTTGGGTGAAGCAGCAGAACCTGGCCAGGGCAATGCAGAAAATAAAGCTGAAAGTGCAGAGGCAGATAGCTAGACTTTTGAGATCAGATACAGACATATAGATTTCCAGTCCTTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCTTTTGGTTTATATCCCCAAAATGTGTATAAGCAAGCACGTGGTGTGTAAATCTTTTTGGCTCCTCGACAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATACGTAAAAGACTAGAAGGTAGCTCAATAAAAAGGAAAANAAAGCGTAGAATTTTTTGGGCGAAAAAAAAAAAAAAAAAAA]
[+] EMBL AK103560 [TTGTCTTATTTGGTAACAAGGACCGTCTGCACATCGGAAAGGAGTTGTCAAAAGTATATTTGGATGATCGTGTCCATAAGCTGCTGAGGTATTTCAAACGAGAAGATGGTTGGAAGGCACGTGTGGATTCTGTCATGAAATTCCTTATGAATTGCATTTCTCGTTACCAAATGTCCCTAGATATACAGCAGGCAAGCAGTGATGGATGCAATCTTACCTTTAAGAAGTATTTCACAAGTAAATTCAGCACATTAGTAAAAGAATTAGCAAGGTGTATTGATACATTCTTTGATCATCTTCCAACTGATTCCCTGGGCAGGAATTTGGACAGGATGATGTTTGCCAAAAGTTTGTTAGATAAATTGCAACAACTGCTGTGTGCAGATGATGTCTCTGATGAGCTTCTTTTCACAATTTTCAAGCCTTCCGATGAACCTATTGACTCTTTTGATAGCCATGACCAGACAGATGATGCAACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATCTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTAGTCCATGACTCAAAACGACGTGGATGTTTCTTTAATGCCCTTGACGACAAGAATTTAGCAGAAATAATTATGCATGCAACCAAGGAGGGAGAGCAGAGGAACCAAAGAGAACAGAGGAGTGCCCACAATGCAAATCGATGGTCATCAGGGTCATCGAGGCATGACATAATTGCTGCTGGCAACAGTCGACCAATGAGATGGAGTCACTTTCCAGGTTCTGGAAACACAAGGAGAAGCAATGGCCACGATTCACGACTAAATGTGTGTCACACAAAAGAGGACATGCATAGAACACACTTTCAGCAACGCAAGTCCTATAGTGGTGACTATTCACAAGTTGCTCCTCCTAATCAATATTGGCACAATGGCAACAGACCATCCCGTGGCAGTTATGGTTATCTGGAAGTGTTTAGAGAACATCCAAATCATCATTCTGGTCAGGACTCACGTACTAGAAGTTATCATGAAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATGAACGGACCAATAACCATTGGATGGAAGAACCTCATCAGGTGCAGAATGCCACCTGTAACATGCCAGTTACTATGCAGCAAGGGATGAAAAGAAACTGGTGCGAAGCAGAAGCATCAGATTCACCCCAGCAGGTCAATGCAAAAATAAGATCCGAAAGTGCAGATCGACCTCATTTGCATGACGAACATGGAGGTTATGGAACTGCATCTCACCAACTGCCTGCAATTAAGCCCGAAGATGTTTCCGAGCAGCAGTGTGAGATGAAAACAGACAGCTATGAGGCAGAAGCATCAGAATCACCAAATGACAGCACAAGAGTAAGGCCTGAAAGTGTAGAGCAACCTTATTGTCAGGCACAGGGTGACAGTTCTGGAGCTGCTTCCCAGGAACCGGTTATCCCTGAGCAGAGAGGGATGTCAGGTGACTTGTGCGAAGCAGTATGCCACCAGAGCAACACGTCAGGTTCACCAAACAGGGGCAGTACTGAAGTAACACTCGAAGGTGCAGAACAACCTCATTGCCAGGCGCAGCCTGACGGTTCGGGAGTTGCTTCAAATGAAGCGCCTGTTCCTGAACAGCGATGGACGGAAGGGGACTTGGGTGAAGCAGCAGAACCTGGCCAGGGCAATGCAGAAAATAAAGCTGAAAGTGCAGAGGCAGATAGCTAGACTTTTGAGATCAGATACAGACATATAGATTTCCAGTCCTTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCTTTTGGTTTATATCCCCAAAATGTGTATAAGCAAGCACGTGGTGTGTAAATCTTTTTGGCTCCTCGACAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATACGTAAAAGACTAGAAGGTAGCTCAATAAAAAGGAA ]
[+] EMBL CF306545 [ AACTGTTGATCTTCATGACCATGATATCTCCCTAGATGACCCTTTGGAGATAAAGTCTCTTTGTATCAAAACCCTGATGGATCTTTCAAAAATGCGGCTTCCTTGTGAAGACAATGAGAGTTCGATTCGGGACTTATGCTTGAAACGAGCGAAACTGGTATTCTGCACTGCTTCTAGTTCATTTGAGTTGTTCAGGTTGCAAAACGTGATGCCTATAAGCATTTTGGTTATTGATGAGGCAGCACAACTAAAAGAATGCGAAGCACTGGTTCCTCTCTTGCTCCCAGGGATAGAGCACATTCTGCTGATTGGAGATGAAAACCAATTATCATCATTGGTAAAGAGTAAGATTGCTAAAGATGCTGACTTTGGCCGAAGTCTCTATGAGAGATTGTGTACAATGGGTTATAGAAAGCATTTGCTGGAAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATG ]
[+] EMBL CB641256 [ AAGTACAATATAGGATGCACCCTGGCATCAACAAATTTCCAAATGCCAACTTTTATGATAACCGAATTTCTGATGGTCCCAGTGTCCAACAGGAAGACTATATGAAGAGTTATCTCCCTGGCCCTATTTATGGTGCTTATTCATTCATTCATATTGAAAACGATATGGAAATGCTTGATGAACTTGGCCAGAGTTCCAAAAATATGGTTGAGGTTGCTGTAGCGACCAATATTGTTGAAAGACTTGCAAAAGAGTGCTCTGAGAAGAGGCAGCGAACCAGCCTTGGTGTGATATCTCCATATACTGCCCAAGTAATTGCATTGCAAGAAAGACTTGGAAAACAGTTCAAGAATCATGAGTTTCTGTCTGTTACAGTAAAATCCATTGATGGATTTCAAGGTGGAGAGGAGGACATAATATTGATTTCAACCGTTAGGTCCAACAAAAATGGCAAAGTAGGATTCCTCTCGGATGCTGGGAGAATTAATGTGGCTCTGACAAGAGCAAAGTATTGCCTTTGGATCCTTGGAAATGGAGCCACTTTGCTGGCAAGCAATTCAATATGGGCAGAATTA ]
[+] EMBL OSR3073A [ AAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCACAACAAGCACCATATAGGACTTTTGGTGGTCGGGGTAGAGGGAGACCTACATATCATGGTAGAGGTAGGGGAGGATGGTATTGACGGACCAATAACCATTGGGTGGGAGGACCTCATCAGGTGCAGGATGCCACCTGTAACATG ]
[+] EMBL OSR29391A [ AAACCATGTGCAGTACTCCTCAAACAGGCAATGGGAGGTTTCCTTATTCTGGATCAATTCAGAGGGAGAAATCACAGAGGCAAACTAGTATCCTTGGTGAACGGCAACCTTTAGGAGGTGACGGCAATAAAGGATTTCAGGATGGGACTTCTGGTTATCCATGCCGGCGCAATTCTTCTCAAATTAGGCCAAATACATATGAAGCCGGTGCTCCTGAACTTCAAAGTATGAATAAGCACAGGGAGTTCAGTAGTTATCCAC ]
[+] EMBL AU173431 [ GCTAGACTTTTNAGATCAGATACNGACATATAGATTTCCNGTCCNTTTTTTTTTTGCTCTGTATAGGATAGTGTTCCCCCNTTTGGTTTATATCCCCNAAATGTGTATAAGCAAGCACGTGGTGTGTNAATNTTTTTGGCTCCTCGNCAGTAGGGAGAACCTAGGAACCAACCTGGGAAGCAATATGTNAAAGACTAGAAGGTAGCTCAATNAAAAGGAAAANAAAGCGTAGAATTTTTTGGGCGAAAAAAAAAAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||