These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9635#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1047 fasta sequence [AACGCCAAGTTGAACAGCGTGGTTGGACACATACTCCACTCCTCCATCCTTGTCCCATACCACGGCTGGAGGATTAGCCACAGGACGCACCACCAGAACCACGGTCATGTCGAGAAAGACGAGTCCTGGCAACCGCTGTCTGAGAGGCTGTACAATAGCCTGGACTATATGACGAAGAAATTGAGGTTCACCATGCCGTTTCCCATGCTGGCATTCCCATTATACTTGTTTGCAAGGAGTCCAGGGAAAAAAGGTTCACACTTCAACCCAAGCAGTGATCTGTTCCAACCAAATGAGAAGAAGGATGTGATAACATCAACTGCATCCTGGCTGGCAATGGTTGGGATTCTTGCTGGTCTGACCTTTGTGATGGGGCCCCTCAAAATGTTAAAGCTCTATGCTGTTCCATACGTGATATTTGTTATGTGGCTTGATTTTGTCACATATTTGCACCATCATGGCCATGAGGACAAGCTTCCTTGGTACCGTGGAAAGGAGTGGAGCTATCTGCGCGGAGGATTGACAACACTTGATCGGGACTACGGGTGGATCAACAACGTACACCATGACATTGGAACCCATGTCATTCATCATCTTTTCCCACAAATCCCACATTACCATCTTGTTGAGGCGACTGAGGCAGCAAAACCAGTGCTGGGAAAATACTACAAAGAGCCAGAGAAATCAGCTCCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACACCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCTCTGATGTAACAAACATGTGATTCTTTCGACAAGATATATAATACAGTAAAGAACGAGAAAAAAAAAA] [+] EMBL AK058242 [AACGCCAAGTTGAACAGCGTGGTTGGACACATACTCCACTCCTCCATCCTTGTCCCATACCACGGCTGGAGGATTAGCCACAGGACGCACCACCAGAACCACGGTCATGTCGAGAAAGACGAGTCCTGGCAACCGCTGTCTGAGAGGCTGTACAATAGCCTGGACTATATGACGAAGAAATTGAGGTTCACCATGCCGTTTCCCATGCTGGCATTCCCATTATACTTGTTTGCAAGGAGTCCAGGGAAAAAAGGTTCACACTTCAACCCAAGCAGTGATCTGTTCCAACCAAATGAGAAGAAGGATGTGATAACATCAACTGCATCCTGGCTGGCAATGGTTGGGATTCTTGCTGGTCTGACCTTTGTGATGGGGCCCCTCAAAATGTTAAAGCTCTATGCTGTTCCATACGTGATATTTGTTATGTGGCTTGATTTTGTCACATATTTGCACCATCATGGCCATGAGGACAAGCTTCCTTGGTACCGTGGAAAGGAGTGGAGCTATCTGCGCGGAGGATTGACAACACTTGATCGGGACTACGGGTGGATCAACAACGTACACCATGACATTGGAACCCATGTCATTCATCATCTTTTCCCACAAATCCCACATTACCATCTTGTTGAGGCGACTGAGGCAGCAAAACCAGTGCTGGGAAAATACTACAAAGAGCCAGAGAAATCAGCTCCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACACCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCT ] [-] EMBL CB623646 [ gtTTCACCATGCCGTTTCCCATGCTGGCATTCCCATTATACTTGTTTGCAAGGAGTCCAGGGAAAAAAGGTTCACACTTCAACCCAAGCAGTGATCTGTTCCAACCAAATGAGAAGAAGGATGTGATAACATCAACTGCATCCTGGCTGGCAATGGTTGGGATTCTTGCTGGTCTGACCTTTGTGATGGGGCCCCTCAAAATGTTAAAGCTCTATGCTGTTCCATACGTGATATTTGTTATGTGGCTTGATTTTGTCACATACTTGCACCATCATGGCCATGAGGACAAGCTTCCTTGGTACCGTGGAAAGGAGTGGAGCTATCTGCGAGGAGGATTGACAACACTTGATCGGGACTACGGGTGGATCAACAACGTACACCATGACATTGGAACCCATGTCATTCATCATCTTTTCCCACAAATCCCACATTACCATCTTGTTGAGGCGACTGAGGCAGCAAAACCAGTGCTGGGAAAATACTACAAAGAGCCAGAGAAATCAGCTCCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACGCCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTATTGCGAATGATTGAAGACGGAGATCACCTCTGATG ] [+] EMBL CB680483 [ CATGCTCGCATTCCCATTATACTTGTTTGCAAGGAGTCCAGGGAAAAAAGGTTCACACTTCAACCCAAGCAGTGATCTGTTCCAACCAAATGAGAAGAAGGATGTGATAACATCAACTGCATCCTGGCTGGCAATGGTTGGGATTCTTGCTGGTCTGACCTTTGTGATGGGGCCCCTCAAAATGTTAAAGCTCTATGCTGTTCCATACGTGATATTTGTTATGTGGCTTGATTTTGTCACATATTTGCACCATCATGGCCATGAGGACAAGCTTCCTTGGTACCGTGGAAAGGAGTGGAGCTATCTGCGCGGAGGATTGACAACACTTGATCGGGACTACGGGTGGATCAACAACGTACACCATGACATTGGAACCCATGTCATTCATCATCTTTTCCCACAAATCCCACATTACCATCTTGTTGAGGCGACTGAGGCAGCAAAACCAGTGCTGGGAAAATACTACAAAGAGCCAGAGAAATCAGCTCCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACACCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGNGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCTCTGATGTAACAAACATGTGATTCTTTCGACAAGATATATAATACAGTAAAGAACGAGAAAA ] [+] EMBL CF197273 [ aGGAGGATTGACAACACTTGATCGGGACTACGGGTGGATCAACAACGTACACCATGACATTGGAACCCATGTCATTCATCATCTTTTCCCACAAATCCCACATTACCATCTTGTTGAGGCGACTGAGGCAGCAAAACCAGTGCTGGGAAAATACTACAAAGAGCCAGAGAAATCAGCTCCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACGCCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCTCTGATGTAACAAACATGTGATTCTTTCGACAAGATATATAATACAGTAAAAAAaa ] [+] EMBL BE230020 [ CCCCTCCCATTCCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCACTATGTTAGTGACACCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTCTTCTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCTCTGATGTAACAAACATGTGATTCTTTCGACAAGATATATAATACAGTAAAGAGCGAGAAAAA ] [+] EMBL AU173910 [ CCACTTACTTGGTGTGCTAGCAAAGAGCTTAAACAGCGACCNCTATGTTAGTGACACCGGAGACGTAGTGTACTACCAAACTGACTTGAAAACTAGTTNTTNTGCACAAAGCTCGGATTGACAGAACATTAGTCTCTAGCTTATTTTTCGATTTCTCAGGAGCCTGGGCTTAACATCTGACCAGCCTCCTGGGCGTTGAGCCTAGAATTTCAAAGCATTATCATTGTAAAGGAGCATACATGTGTAATTCTTTCGAATGATTGAAGACGGAGATCACCTCTGATGTAACAAACATGTGATTCTTTCGACAAGATATATAATACAGTAAAGAGCGAGAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||