These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9640#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1738 fasta sequence [CCATTAATTGAGCTCCAGCCGTCCGGGAGACGAGATAATTCCGTTCAATTTCAAGTTAATCCCGCGGCAGCCATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGGTAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAG-TCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAAGCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGCGCGACGGCGG-CGAGGACGGTGGCTTCGTACGCCCGCCGCGAC-GACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA-GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAATTGGACGAGAAATCAGTTCTCT] [+] EMBL AK068186 [CCATTAATTGAGCTCCAGCCGTCCGGGAGACGAGATAATTCCGTTCAATTTCAAGTTAATCCCGCGGCAGCCATGGCTGCGCTTCTCATGAACACCGGCGCTGTCTCGATGCCCTTCCCCACCACGCGCACCGCCGCGCGACGGCGAACCAGCAGAAGCAGATGCCAGGCTTCATCTAGCGGCGGTAGCAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTGACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGCCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCGAAGCAG TCGGAGTTCGTCGGGTACACGGGGAAGCCGCTCTACTCGGCGTGGTTCGGCGGCGAGGCCGAGCAGCGCGCGGTGTTCGTGGACGAGGTGAGGTGCGTCGGCTGCCTCAAGTGCGCGCTCTACGCCAACAAGACGTTCGCCGTCGAGTCCGTCTACGGCCGCGCCCGCGTCGTCGCGCAGTGGGCCGACGCCGAGGACAAGATCCTCGACGCCATCCAGACATGCCCCGTCGACTGCATCTCGATGGTCGAGAGGTCAGATCTCGCGGCTCTCGAGTTCTTGATGTCCAAACAGCCGCGCGGCAGAGTCCGGGTCTCGGAAGGCAACACCGTGGGCGCTCGCGCACCCGACATCTTCAACGAGGTAAGCAAGTTTCAGAAGAGGTTCCAGGAGATGAAGCAGAAGTCTGCCACGAGAGAATCCGAGGAGTCGGAGGCAGCAAGGCAATCGAGGAGCTCGGCAGTTCAGACGATCAGGTCGATCTCGAACTGGTGGTACTGGCAGCCGTTCAGAGCTCCGGCGACCACCGTACTCGCTTCTCTCCACCTGCCGGCGCCGCCGCCTTCTCCTTCCATGCCCGCCGACCCGGTGACGGACAGGCTCCAAGAAGCGGCAGCTCGACGCAAAGCGGGAGGCGCGACGGCGG CGAGGACGGTGGCTTCGTACGCCCGCCGCGAC GACTACTGGACTCCGCAGCTGAACCTGCCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTTCTCCTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGATGGCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTATGTGGTTTGGACGAGAAATCAGTTCTCT] [+] EMBL OSS1913A [ AAGCAGATGCCAGGCTTCATCTAGCGGCGGTAG AGCAACGAAGGAGGCGGCGAGA NTACCGCGGGAGGAGCGGGCGCGNTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCGTCGCCGCAGTCGGAGATCAAGGNCGCGTACCGGTCGCTGCAGAAGCGGTGCCACCCCGACGTCGCCGGCGCCAAGGGCCACGACATGGCCATCGTCCTCAACGAGGTCTACTCCCTCCTCTCCGACCCCGCCGCCCGCCTCGCCTACGACCAGGAGCAAGCG AG AGTTCGGAGTTCGTCGGGTACACGGGGAAGCCG TNTACTNGGCGTTGT ] [+] EMBL OSS2115A [ AAGCAGATGCCAGGTTTCATCTAGCGGCGGTA NAGCAACGAAGGAGGCGGCGAGAGCTACCGCGGGAGGAGCGGGCGCGGTGGGTCGACGACGTGGGTNACGGAGTACGACCTGTACGGGCTGCTGGGCGTGGAGCGGTCNTCGCCGCANTCGGAGATCAAGGCCGCNTACCGNTCGCTGCAGAAGCG ] [+] EMBL BQ907788 [ CGAC GCGGCCGAGGACGGTGGCTTCGTACGCCCGCCGCGACTGACTACTGGACTCCGCAGCTGAACCT CCGTCCCTAGCATCGCCGCCGGAGCGACCTCACCGGAGGCAGAGCGCTT CTCCCCGCAGCCAGACGCGGCGAGCAACCCCCACCGGCGAT GCGGGGTGACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACAT AAGATACATAGGATATGTTG CCATAC AGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAAaa ] [+] EMBL AU174229 [ ACATTGGGCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAA ] [+] EMBL AU222946 [ GCAGCATCGACCTGACGGCGCCGCTGCTGATGGCGATCATCTCGGCCGGGTTCGTGGGTTACAACAGGGAGGAGGTGGCCGGAGTCGGCGGCGGCGGCATCCAGGAGCACGTCGGTGGCGCCGCCGCTCTGGGTCTCGTGAACAGCTTCGAGCTCAAGATCGTCCTAGCCTCCGTGACATGGTTCATCATCGGCGCGGCGATTGCCGGATTCATTCAGTTTCTCGCGAGGAGCGAAGTGAACTTCAGGAAATGAAGCGAATACATGATTTATTCACGATGACATAAAGATACATAGGATA GATGAAGTATACATAGTAGTATAGATGCATGTATATAAAGGTTACTGCAATTAAGGAATTTATTAGTGGTGAAAAAATGAGATATAAAGTAGAGCAAAATGAAATGTACGAGACGTATAGCATTCAGCTTAAAAAAA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||