cluster # 9660

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Oryza sativa
cluster # 9660 cluster # 9660 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9660#0 length = 1444 sequences # 6
consensusID : consensus_9660#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1444
fasta sequence
                              [CGGCAGTGCTGGTTGCCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCGCCGGTCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGATCGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCAGCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTCCTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTTTTTTCTCCCCCAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACTGAAGTTTAATGGTAATCTCCCTCTTCACACCTTAAGCAAGTATCACTTGAATACAACTACGGCTCTACCTTAT]

[+] EMBL CB661537             [CGGCAGTGCTGGTTGCCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCGCCGGTCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGATCGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCAGCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTCCTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGg                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK071966             [               CCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCGCCGGTCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGATCGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCAGCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTCCTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTTTTTTCTCCCCCAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACTGAAGTTTAATGGTAATCTCCCTCTTCACACCTTAAGCAAGTATCACTTGAATACAACTACGGCTCTACCTTAT]
[+] EMBL AK103712             [               CCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCGCCGGTCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGATCGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCAGCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTCCTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCGACTCCGATTGGCGATTGGACAACACTGAAGGCATGTCAACTATTTCCGATCAGAAGAAACGGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACAAGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAAGGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAAAAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACTCTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTTTTTTCTCCCCCAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACTGAAGTTTAATGGTAATCTCCCTCCTCACACCTTAAGCAAGTA                               ]
[-] EMBL CB631788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTTTTTTCTCCCCTAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACGGAAGTTTAATGGTAATCTCCCTCTTCACACCTAAAaaagaa                                ]
[-] EMBL CB661538             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCAAAGAAGCATTTCGGATTTGGACAGTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAAAAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATGTTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGCGATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTTTTTTCTCCCCCAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACTGAAGTTTAATGGTAATCTCCCTCTTCACACCTTAAGCAAGTATCAaaaaaaaag                   ]
[+] EMBL AU181542             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTGAGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCACAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATCTTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTATGCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCTTCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCACGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGCGAGTGCAGGCACAGATCAGATAGA                                                                                                                                                                ]




>consensus_9660#0
CGGCAGTGCTGGTTGCCTCCTCCGCACGCGCAACGGCGCGACCGGCGACTCTCCTCGCCG
CCGGTCACCGGTCGCCTGGCCCGCCTCTCGCGCCCCGCCAGCCACCGCATCGGCGCAGAT
CGACGGACGCCGAGACGCGCAGCCGCAGTCGCGCAGAGGCGCCGAGTGCCTGAGGGCTCA
GCCAGCCGCCGACCGCCGCGGCCGCCTGGCCCCCCTGCCCGTCTCGTCTTCTCCAGTCTC
CTCCAATCCTTCGTGGCAGGTCTCCAAACTCCGGCTCCCCGCTGCGGCGCTCCACCTCCG
ACTCCGATTGGCGATTGGACAACACTGAAGGCATGTCAACTATTTCCGATCAGAAGAAAC
GGACCTTAGAAGCCCTTCAACAACGTTATGCTGCTGCAAAAGCTAAGAAACTGCAAGACA
AGCCTAGGTGTCAGACAAGGAATAAAGATAGTGCGCCCAAGCCCAATCTTGATGCATCAA
GGAAAGGCAAAGCTCCAGATTTCATTCCATCTCGAACTTCTGCTCCGTTTCCTTCAAAAA
AAGGTCTAGCAATCTCCAGTTCTTCTGCTTCCTCAGGTGGAGAAACCAATCCTGTATACT
CTGAACTTTCATTTGCTCCACATGATAATTTGCTCCAAAGAAGCATTTCGGATTTGGACA
GTATGGATGTTGTGCACAATGTTGTTTATGACATAATTCAGAAAGGTGGAGATGCTGGAA
AAATTACCAAGGGAGCCAAAAAGTTAAAGCTGGAAAAAGGGATTCTGCTGGATAACTATG
TTCACAGGGGTCCTAGATTAGTTGATGCACAGGCAAAATCTTTGTTAATTCATTCAAAGC
GATCAAAAAGGCACATGTCACTTAAGCAACATAAGAAATGTGGGTCATTTGATTTACCTG
AGACACTCCGCAAGTTTGACCTCTACAAGCCAATGCATGAGATGTGGAAAGAGTATATCA
CAGAGCTTACCAAAAGCACACCGAAAAAGCAGTTATCTGAAACCCTCCTCTCAGCAGATC
TTCATGGGGCTCTTGTAATAGTGGCAGAATGCAAATCAGCCTCTTCTTATCAAGGCGTAT
GCGGCATCATGATTCGCGATACTGCAGAGACTTTTGGAATCATATCAGATGACAATCGCT
TCCGAGTTGTGCCAAAAGCTGGGTCAGTTTTCATCCTCCAAGCAGACTGTTGGAAGGTCA
CGCTGATCGGTGACAAACTGTCACCCAGGGAGAAGCTGAAGGAGAACCAGCGTCAGCAGC
GAGTGCAGGCACAGATCAGATAGAGTTTTTCATCCTTTGTCTGTTGTAATTTTGGTTGTT
TTTTCTCCCCCAGAAACATGTACAGGGTTTAGTTGTTTAGGTGTTGTTACTGAAGTTTAA
TGGTAATCTCCCTCTTCACACCTTAAGCAAGTATCACTTGAATACAACTACGGCTCTACC
TTAT
clustalw multiple alignements is not computed in this case