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Oryza sativa
cluster # 9664 cluster # 9664       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9664#0 length = 2597 sequences # 5  
consensus_9664#1 length = 651 sequences # 1  

consensusID : consensus_9664#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2597
fasta sequence
                              [CAATGCGTCGCGCCCTCGACTGGACACCTCCCCTCCCCGCCTCGCTCCTCACCACCACCCCTCGCCGCCTTCTCGAACCTTCTAGTACCTTCCCCCTCCCCCTCCTCCGCCCCTCTCCTCCTCCACCTCCTCCGATTTCTCCGCCTCCTCCGCCGCCGCCCGCAGCCGCGGAGCTCCCCGCCGCCGACATGG-ACGACGCCTGCGCCGTCTGCGCGGAGCCGCTCGAGTGGGTGGCCTACGGCGCCTGCGCCCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCGTCCTCCGCGACCTCCGCTGCTGCCTCTGCATCACCCCCTGCCCCGCCGTCTTCGTCACCAAGGCAATGGGGGACCGGACGAAGGTGATCCCCGATTTCTCGGCGCTCCGCGGCGCCGGCGGCGAGGGGAAGGCCGGGGAGTACTGGCACCACGAGGCCACGCAGACGTGGTTCGACGACGCCGACCAGTACAGGATGATCAGTGCCATGTGTCGGCTCTCTTGTAGCGTCTGTGATAGCAACAAGGAGGAGGAGGAGGAGCGTACTGGTAAAGCGGCCAAGGCGAAGCGTAAGAGCAAGATCCGGAGCGTTGATCAGCTCAAGGGGCATCTCCTCGATCGCCATGGCTTGTACATGTGTGACCTTTGCTTGGAAGGCAGAAAGGTATTTATTTGTGAGCAGAAGCTTTATACAATGTCTCAATTAAATCAGCACATAAAATCTGGTGATTCGGAGGTGGATGGCTCAGAGGTTGAGCGCCGTGGCTTTGGAGGGCATCCAATGTGTGAGTTTTGCAAAAGCCCATTTTATGGTGATAATGAATTATACACCCATATGACAAGAGAACATTTTTCCTGCCATATATGTCAAAGGCAACATTCTGGACAATATGACTACTTTAGGAACTATGATGACTTAGAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCCCTTCTGGCTCAACAAGCCGCCCTGTGCATGTCCCCAGTTCTGCTGGAAATGAAAGGCAAGACACATTCAGCAACAGCCAGGTGTTATCCAGTGTGGAGGACATTCTTGCAGCAAATAAAGCCCTGGTTGAGAAAATGCGGGCTGCATTAGGAATGGATCAGGATATGTTCAACGCATTTAAAGAGATCGCTGGGGAATATCGGCAAGGTGTTATCAATTCTTCAGAGTACCTTTCATATGTAAAGCAGTTTGGTCTCTTGCACCTTGTTCCTGAAATGGCCAGGTTATTGCCTGATGCTCAGAAGCAGAAGGAGCTTGCAGATGCCTACTATGCCAATTTGCGCCTTACAAGCCTCCAAGAAAATGGTGGGGGTGGAACCGATAACTCGAAACAAGGCAATCAGAATAAGAAGGGGAAGGGGGGAGTTCCTGACGCCATAGGAACCAGTAATGCTGCAACAGATCCGCTGAAAGATAAGTTGCTGAATACTGCCATCAAGTTCCAGTCAAATTACATGCCCCAGGAAGGGTGTTGTGGCGTGCAGCGAAAAGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGGGTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAATTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGTTTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGATGCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTTGATTTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAACTTGAGACTAGAACGGTCCACACCATACTGCATAGTGGAGTTTTGCAACTTCACATGAGTGAATTTGGGCTATAGACGGTTCTGTTGCTGTCAACTCAAAACTCCTTTTAATACGAAGTTATGGTCAAAATCGTACCT]

[+] EMBL AK063298             [CAATGCGTCGCGCCCTCGACTGGACACCTCCCCTCCCCGCCTCGCTCCTCACCACCACCCCTCGCCGCCTTCTCGAACCTTCTAGTACCTTCCCCCTCCCCCTCCTCCGCCCCTCTCCTCCTCCACCTCCTCCGATTTCTCCGCCTCCTCCGCCGCCGCCCGCAGCCGCGGAGCTCCCCGCCGCCGACATGG ACGACGCCTGCGCCGTCTGCGCGGAGCCGCTCGAGTGGGTGGCCTACGGCGCCTGCGCCCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCGTCCTCCGCGACCTCCGCTGCTGCCTCTGCATCACCCCCTGCCCCGCCGTCTTCGTCACCAAGGCAATGGGGGACCGGACGAAGGTGATCCCCGATTTCTCGGCGCTCCGCGGCGCCGGCGGCGAGGGGAAGGCCGGGGAGTACTGGCACCACGAGGCCACGCAGACGTGGTTCGACGACGCCGACCAGTACAGGATGATCAGTGCCATGTGTCGGCTCTCTTGTAGCGTCTGTGATAGCAACAAGGAGGAGGAGGAGGAGCGTACTGGTAAAGCGGCCAAGGCGAAGCGTAAGAGCAAGATCCGGAGCGTTGATCAGCTCAAGGGGCATCTCCTCGATCGCCATGGCTTGTACATGTGTGACCTTTGCTTGGAAGGCAGAAAGGTATTTATTTGTGAGCAGAAGCTTTATACAATGTCTCAATTAAATCAGCACATAAAATCTGGTGATTCGGAGGTGGATGGCTCAGAGGTTGAGCGCCGTGGCTTTGGAGGGCATCCAATGTGTGAGTTTTGCAAAAGCCCATTTTATGGTGATAATGAATTATACACCCATATGACAAGAGAACATTTTTCCTGCCATATATGTCAAAGGCAACATTCTGGACAATATGACTACTTTAGGAACTATGATGACTTAGAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCCCTTCTGGCTCAACAAGCCGCCCTGTGCATGTCCCCAGTTCTGCTGGAAATGAAAGGCAAGACACATTCAGCAACAGCCAGGTGTTATCCAGTGTGGAGGACATTCTTGCAGCAAATAAAGCCCTGGTTGAGAAAATGCGGGCTGCATTAGGAATGGATCAGGATATGTTCAACGCATTTAAAGAGATCGCTGGGGAATATCGGCAAGGTGTTATCAATTCTTCAGAGTACCTTTCATATGTAAAGCAGTTTGGTCTCTTGCACCTTGTTCCTGAAATGGCCAGGTTATTGCCTGATGCTCAGAAGCAGAAGGAGCTTGCAGATGCCTACTATGCCAATTTGCGCCTTACAAGCCTCCAAGAAAATGGTGGGGGTGGAACCGATAACTCGAAACAAGGCAATCAGAATAAGAAGGGGAAGGGGGGAGTTCCTGACGCCATAGGAACCAGTAATGCTGCAACAGATCCGCTGAAAGATAAGTTGCTGAATACTGCCATCAAGTTCCAGTCAAATTACATGCCCCAGGAAGGGTGTTGTGGCGTGCAGCGAAAAGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGGGTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAATTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGTTTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGATGCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTTGATTTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAACTTGAGACTAGAACGGTCCACACCATACTGCATAGTGGAGTTTTGCAACTTCACATGAGTGAATTTGGGCTATAGACGGTTCTGTTGCTGTCAACTCAAAACTCCTTTTAATACGAAGTTATGGTCAAAATCGTACCT]
[+] EMBL AU181858             [                                                                                                      TCCTCCGCCCCTCTCCTCCTCCACCTCCTCCGATTTCTCCGCCTCCTCCGCCGCCGCCCGCAGCCGCGGAGCTCCCCGCCGCCGACATGGNACGACGCCTGCGCCGTCTGCGCGGAGCCGNTCGAGTGGGTGGCCTACGGCGCCTGCGCCCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCGTCCTCCGCGACCTCCGCTGCTGCCTCTGCATCACCCCCTGCCCCGCCGTCTTCGTCACCAAGGCAATGGGGGACCGGACGAAGGTGATCCCCGATTTCTCGGCGCTCCGCGGCGCCGNCGGCGAGGGGAAGGCCGGGGAGTACTGGCACCACNAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB644135             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TGGCCCTTAGGTTGAGCGCCGTGGCTTTGGAGGGCATCCAATGTGTGAGTTTTGCAAAAGCCCATTTTATGGTGATAATGAATTATACACCCATATGACAAGAGAACATTTTTCCTGCCATATATGTCAAAGGCAACATTCTGGACAATATGACTACTTTAGGAACTATGATGACTTAGAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCCCTTCTGGCTCAACAAGCCGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB644140             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               AAAGAGATCGCTGGGGAATATCGGCAAGGTGTTATCAATTCTTCAGAGTACCTTTCATATGTAAAGCAGTTTGGTCTCTTGCACCTTGTTCCTGAAATGGCCAGGTTATTGCCTGATGCTCAGAAGCAGAAGGAGCTTGCAGATGCCTACTATGCCAATTTGCGCCTTACAAGCCTCCAAGAAAATGGTGGGGGTGGAACCGATAACTCGAAACAAGGCAATCAGAATAAGAAGGGGAAGGGGGGAGTTCCTGACGCCATAGGAACCAGTAATGCTGCAACAGATCCGCTGAAAGATAAGTTGCTGAATACTGCCATCAAGTTCCAGTCAAATTACATGCCCCAGGAAGGGTGTTGTGGCGTGCAGCGAAAAGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGGGTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAATTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGTTTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGATGCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTTGA TTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAACTTGAGACTAGAACGGTCCACGCCATACTGCATAGTG                                                                                                     ]
[+] EMBL AU181859             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  AGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGGGTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAATTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGTTTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGATGCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTTGATTTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAACTTGAGACTAGAACGGTCCACACCATACTGCATAGTGGAGTTTTGCAACTTCACATGAGTGAATTTGGGCTAaaaaaaa                                                           ]


>consensus_9664#0 CAATGCGTCGCGCCCTCGACTGGACACCTCCCCTCCCCGCCTCGCTCCTCACCACCACCC CTCGCCGCCTTCTCGAACCTTCTAGTACCTTCCCCCTCCCCCTCCTCCGCCCCTCTCCTC CTCCACCTCCTCCGATTTCTCCGCCTCCTCCGCCGCCGCCCGCAGCCGCGGAGCTCCCCG CCGCCGACATGGACGACGCCTGCGCCGTCTGCGCGGAGCCGCTCGAGTGGGTGGCCTACG GCGCCTGCGCCCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCGTCCTCC GCGACCTCCGCTGCTGCCTCTGCATCACCCCCTGCCCCGCCGTCTTCGTCACCAAGGCAA TGGGGGACCGGACGAAGGTGATCCCCGATTTCTCGGCGCTCCGCGGCGCCGGCGGCGAGG GGAAGGCCGGGGAGTACTGGCACCACGAGGCCACGCAGACGTGGTTCGACGACGCCGACC AGTACAGGATGATCAGTGCCATGTGTCGGCTCTCTTGTAGCGTCTGTGATAGCAACAAGG AGGAGGAGGAGGAGCGTACTGGTAAAGCGGCCAAGGCGAAGCGTAAGAGCAAGATCCGGA GCGTTGATCAGCTCAAGGGGCATCTCCTCGATCGCCATGGCTTGTACATGTGTGACCTTT GCTTGGAAGGCAGAAAGGTATTTATTTGTGAGCAGAAGCTTTATACAATGTCTCAATTAA ATCAGCACATAAAATCTGGTGATTCGGAGGTGGATGGCTCAGAGGTTGAGCGCCGTGGCT TTGGAGGGCATCCAATGTGTGAGTTTTGCAAAAGCCCATTTTATGGTGATAATGAATTAT ACACCCATATGACAAGAGAACATTTTTCCTGCCATATATGTCAAAGGCAACATTCTGGAC AATATGACTACTTTAGGAACTATGATGACTTAGAGATGCATTTCCAGAGAGACCATTTTC TCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGC TCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCT CGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATT CATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAA CAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCC GTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCC TACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGA TTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCAC AGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCA AGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGA TCCCTTCTGGCTCAACAAGCCGCCCTGTGCATGTCCCCAGTTCTGCTGGAAATGAAAGGC AAGACACATTCAGCAACAGCCAGGTGTTATCCAGTGTGGAGGACATTCTTGCAGCAAATA AAGCCCTGGTTGAGAAAATGCGGGCTGCATTAGGAATGGATCAGGATATGTTCAACGCAT TTAAAGAGATCGCTGGGGAATATCGGCAAGGTGTTATCAATTCTTCAGAGTACCTTTCAT ATGTAAAGCAGTTTGGTCTCTTGCACCTTGTTCCTGAAATGGCCAGGTTATTGCCTGATG CTCAGAAGCAGAAGGAGCTTGCAGATGCCTACTATGCCAATTTGCGCCTTACAAGCCTCC AAGAAAATGGTGGGGGTGGAACCGATAACTCGAAACAAGGCAATCAGAATAAGAAGGGGA AGGGGGGAGTTCCTGACGCCATAGGAACCAGTAATGCTGCAACAGATCCGCTGAAAGATA AGTTGCTGAATACTGCCATCAAGTTCCAGTCAAATTACATGCCCCAGGAAGGGTGTTGTG GCGTGCAGCGAAAAGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGG GTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAA TTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGT TTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGAT GCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTT GATTTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAAC TTGAGACTAGAACGGTCCACACCATACTGCATAGTGGAGTTTTGCAACTTCACATGAGTG AATTTGGGCTATAGACGGTTCTGTTGCTGTCAACTCAAAACTCCTTTTAATACGAAGTTA TGGTCAAAATCGTACCT



consensusID : consensus_9664#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 651
fasta sequence
                              [GCATTGTGCTTGTCTGTATTCAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCC]

[+] EMBL AK108417             [GCATTGTGCTTGTCTGTATTCAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCC]


>consensus_9664#1 GCATTGTGCTTGTCTGTATTCAGATGCATTTCCAGAGAGACCATTTTCTCTGTGAGGATA AAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGCTCAAGAGGCATA ATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCTCGTCGTCCATGC AAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATTCATCTCGGGTGC CATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAACAAGACAAAGCT TTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCCGTCAGGAGGTCC ATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCCTACCAGCACAAT CAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGATTGGGGACCAGC AGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCACAGCAGGGTACAA GAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCAAGAGAACTGAGA ACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGATCC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9664#0      CAATGCGTCGCGCCCTCGACTGGACACCTCCCCTCCCCGCCTCGCTCCTCACCACCACCC 60
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      CTCGCCGCCTTCTCGAACCTTCTAGTACCTTCCCCCTCCCCCTCCTCCGCCCCTCTCCTC 120
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      CTCCACCTCCTCCGATTTCTCCGCCTCCTCCGCCGCCGCCCGCAGCCGCGGAGCTCCCCG 180
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      CCGCCGACATGGACGACGCCTGCGCCGTCTGCGCGGAGCCGCTCGAGTGGGTGGCCTACG 240
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCGCCTGCGCCCACCGCGAGGTCTGCTCCACCTGCGTCGCCCGCCTCCGCTTCGTCCTCC 300
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCGACCTCCGCTGCTGCCTCTGCATCACCCCCTGCCCCGCCGTCTTCGTCACCAAGGCAA 360
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TGGGGGACCGGACGAAGGTGATCCCCGATTTCTCGGCGCTCCGCGGCGCCGGCGGCGAGG 420
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GGAAGGCCGGGGAGTACTGGCACCACGAGGCCACGCAGACGTGGTTCGACGACGCCGACC 480
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AGTACAGGATGATCAGTGCCATGTGTCGGCTCTCTTGTAGCGTCTGTGATAGCAACAAGG 540
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AGGAGGAGGAGGAGCGTACTGGTAAAGCGGCCAAGGCGAAGCGTAAGAGCAAGATCCGGA 600
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCGTTGATCAGCTCAAGGGGCATCTCCTCGATCGCCATGGCTTGTACATGTGTGACCTTT 660
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCTTGGAAGGCAGAAAGGTATTTATTTGTGAGCAGAAGCTTTATACAATGTCTCAATTAA 720
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      ATCAGCACATAAAATCTGGTGATTCGGAGGTGGATGGCTCAGAGGTTGAGCGCCGTGGCT 780
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TTGGAGGGCATCCAATGTGTGAGTTTTGCAAAAGCCCATTTTATGGTGATAATGAATTAT 840
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      ACACCCATATGACAAGAGAACATTTTTCCTGCCATATATGTCAAAGGCAACATTCTGGAC 900
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AATATGACTACTTTAGGAACTATGATGACTTAGAGATGCATTTCCAGAGAGACCATTTTC 960
consensus_9664#1      ---------GCATTGTG---CTTGTCTGTATTCAGATGCATTTCCAGAGAGACCATTTTC 48
                                * **  *     **      *  ***************************

consensus_9664#0      TCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGC 1020
consensus_9664#1      TCTGTGAGGATAAAGGGTGCTTGGAGAAGAAGTTTGTTGTCTTTGAAAGTGAAGCAGAGC 108
                      ************************************************************

consensus_9664#0      TCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCT 1080
consensus_9664#1      TCAAGAGGCATAATGGTGTGGAACACGGGAAGCACATGCCTGGTGCTGTTGACAGTAGCT 168
                      ************************************************************

consensus_9664#0      CGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATT 1140
consensus_9664#1      CGTCGTCCATGCAAAATGGCATTGCAGCTGTAGGCCATGGGTTGGGAGGTCAAAGTGATT 228
                      ************************************************************

consensus_9664#0      CATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAA 1200
consensus_9664#1      CATCTCGGGTGCCATTGCAATCATTAAGCATTTCTTCTAGTTCTGGGCAATCATCAGAAA 288
                      ************************************************************

consensus_9664#0      CAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCC 1260
consensus_9664#1      CAAGACAAAGCTTTGCGAGAAATCGGGTACTTCAGCAAGCATGTGTTCCTCCTCTTTCCC 348
                      ************************************************************

consensus_9664#0      GTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCC 1320
consensus_9664#1      GTCAGGAGGTCCATGATGCTAGAGTAGGTTCTGTCCTTCAAGAAGCTTCATTCCCTTCCC 408
                      ************************************************************

consensus_9664#0      TACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGA 1380
consensus_9664#1      TACCAGCACAATCAAGGAAGGCACCAGCACATAGTCAGAGCTCAAGGACTGCAGCAAGGA 468
                      ************************************************************

consensus_9664#0      TTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCAC 1440
consensus_9664#1      TTGGGGACCAGCAGTTTCGTCCTTTATCAGTTACTAGTAACAGGAATGTTGCTTTAGCAC 528
                      ************************************************************

consensus_9664#0      AGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCA 1500
consensus_9664#1      AGCAGGGTACAAGAACATTACCTGAAAACACCCATGTATCTGGGCTTGCACAATACAGCA 588
                      ************************************************************

consensus_9664#0      AGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGA 1560
consensus_9664#1      AGAGAACTGAGAACATGCACCAAGCTGTTCAGCCTCAGTTCCTAAAAAATAATTCTTTGA 648
                      ************************************************************

consensus_9664#0      TCCCTTCTGGCTCAACAAGCCGCCCTGTGCATGTCCCCAGTTCTGCTGGAAATGAAAGGC 1620
consensus_9664#1      TCC--------------------------------------------------------- 651
                      ***                                                         

consensus_9664#0      AAGACACATTCAGCAACAGCCAGGTGTTATCCAGTGTGGAGGACATTCTTGCAGCAAATA 1680
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AAGCCCTGGTTGAGAAAATGCGGGCTGCATTAGGAATGGATCAGGATATGTTCAACGCAT 1740
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TTAAAGAGATCGCTGGGGAATATCGGCAAGGTGTTATCAATTCTTCAGAGTACCTTTCAT 1800
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      ATGTAAAGCAGTTTGGTCTCTTGCACCTTGTTCCTGAAATGGCCAGGTTATTGCCTGATG 1860
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      CTCAGAAGCAGAAGGAGCTTGCAGATGCCTACTATGCCAATTTGCGCCTTACAAGCCTCC 1920
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AAGAAAATGGTGGGGGTGGAACCGATAACTCGAAACAAGGCAATCAGAATAAGAAGGGGA 1980
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AGGGGGGAGTTCCTGACGCCATAGGAACCAGTAATGCTGCAACAGATCCGCTGAAAGATA 2040
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AGTTGCTGAATACTGCCATCAAGTTCCAGTCAAATTACATGCCCCAGGAAGGGTGTTGTG 2100
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCGTGCAGCGAAAAGAAGGGAGAACAACAGATGGATCTTCTCAGGGTCTGCCTTTGAAGG 2160
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GTGCTTGGCAAAGCCGTGGGGGCCAGAGACTCTTCATGAGCAAAGCAAAGAAGTGACGAA 2220
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TTGGTTTTGCAGGTCAAGTTAGTTAGACCTGCCATTTGAGCCGCTACGAAATGTCAAGGT 2280
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TTGTGTCTATCTGGTGTGTGTCTGATAGTTGAGTACATGAGTGCAGCAATCATGTGTGAT 2340
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GCGTTTGCATTTTGATTTTTTTTTCTTTTTTGTCTATCATGTGTGGTGCGTTTGCATTTT 2400
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      GATTTTTTTTTCTTTTTGTCTATTTTTTGTGTGGTGCGTGCGTTTGGTAGACCATGGAAC 2460
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TTGAGACTAGAACGGTCCACACCATACTGCATAGTGGAGTTTTGCAACTTCACATGAGTG 2520
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      AATTTGGGCTATAGACGGTTCTGTTGCTGTCAACTCAAAACTCCTTTTAATACGAAGTTA 2580
consensus_9664#1      ------------------------------------------------------------
                                                                                  

consensus_9664#0      TGGTCAAAATCGTACCT 2597
consensus_9664#1      -----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)