These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9674#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2528 fasta sequence [TCGTCTCCCCCCCTCTTTCTACAGCCATCCGCGCCCCGCCCCCCCGCGTCAACCAAACCCTAACTCGCCCAAATCCGCCTCTCGATCTCGCCTCCGCCGTCCGCCGCCGCCGCCGCCGCCGCCGGCCGCCAAAACCCTACCGCCTCTCGTCGCCTCCGTCCGCCGCAGACGCGCCCGGTATACAACAGGGTGATCGTCGGTTGAAAATGCCATCTGCATCCAAATCCAAGTCCAAAGACAGGTCAGCTGCCAAGGCACCAAAAGAGCAACCTAAGGTTGCAGCAAAGCCTATGGGGAATGGCACAGTTGCAAGTGCCTATAACAACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACGAGATAGATGAACATTCTCGTAGCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCAGAAGATCCAAAGGAAAAATCAACGAGTACTGCACCTCGAGTGGACTCTGTTCCAGGATGTGATGTCGATAAACGTGAGAAGATCAGACAGAAGAATGAGAAGAAGCATCAAAGGCAGAAGGAGAGGCGTGCCCAGGAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGGCTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGATCAACAACCTGGGGTTAATTTGAAGATTGATATAACTGATGAACTTGCAAAGATTGCGACCCTGGAGGTTAAATTCAAGTGTACAAAGCAAGAGATTGAAAGGGCTGTTGTTTCTTCCGAGGGTGATCTAGAAAAGGCTGAAGAGGTTTTGAAGACACAGAAGCAAGAATCAACAGCAACTGCATCTAAGCCTGAAGGATCTGGCGATTCAAGTGGCTTGGCTAACAAAGCGCAGCTAATGCTTGCACAGAACCCAACTAGGCCTCAAACAAATGGATTTTCTTCAGTTGGGGCTCAGCAAATGAGGAGAGATGAGAAGGACTTAAACTACAAGCTTTTGTTAAATGGTAGTGGTCCAAAGGAACATGCAGTTAAAGGGTTTCAACCATTGGCACCATCTGTTAAGCCAGAGATGGGCCGACCACAATTTGTTCAACCTGAGAAAAGGCGGCTTAATGCTAATTCGGTTCCATCGGTTTCTTACATCACATCATCCCCTTTACCTGTTGCAGCACCTCAAATAAAGTCTGAAACGCGACATGTGGCAGGGGGCAATGAGGTGAAAAATGCAATGCATAATGGAAACTTGAGAGAGTCGGTAGTTGTAATGCAGCGTCCCCAATCTGCAGCTGCCAAACAAAGCCTGCCATCTACAAGCCATAGTATGTTTGCGTCAGAACCTCCAAGGGAATGGTACTTAAATGGTGCATCAGGTGTGGATATGATGTTGAATGGTGGTTTAGGTCATGGCCTAAGAAATATGAGCTTGGATGGTGTTAATTCTTCCAAGCAGTTTGTGCATGCAAACCATCAACAAAGTTTTGTTTCCAATCCTATAGATCTGGCTGCTAATGGTTGGGGTGGTACCTGGGGCTCTGGAGGTACATCATCTTCCCTTGGTGCGGCTTCATCACTTGGGTTGTTTCGAGGATGGAGCTCGTCCGAGTCGTCTTCATCTCTATCTCGTCCTGATTGGAGAACTAATGGGCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC-GACACAT-GGTC-AACCATGTTCATGGGTGGCAGATCC-ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT-GCA-GGGGAGGATCTTCCTAGTTTCCCCTA-CCCTGTAGGTAAGAAGCCA-TCGAATAAAA-CAAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT-CCA-GTTGGTTGA-CA-AGTTTTACATGTGTATTGAA-CCGTGTTTGTGTAT-CCTCGACTGTTGG-CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAAGCCCCTATCTCTCTGAACAAATAGCTCACCAATTGTTCTTTGGTGATCTGTTGCTTTACTTGTTCTGTCTTGCGAATGCTGTTTTTTTTTGGGGGGGTGGGGCTGAGGGAGGGGGTTCATTCCAATGAAGTACTCCTATGTGTTTGTTTTTGGGGCTAACGGATCTTTTGCTTCTACCACTAGGTAATTCAAATATTGTTTAGATGGCTTCATGACTCTCTCTTTGTTTTACATCATTTGT] [+] EMBL AK065999 [TCGTCTCCCCCCCTCTTTCTACAGCCATCCGCGCCCCGCCCCCCCGCGTCAACCAAACCCTAACTCGCCCAAATCCGCCTCTCGATCTCGCCTCCGCCGTCCGCCGCCGCCGCCGCCGCCGCCGGCCGCCAAAACCCTACCGCCTCTCGTCGCCTCCGTCCGCCGCAGACGCGCCCGGTATACAACAGGGTGATCGTCGGTTGAAAATGCCATCTGCATCCAAATCCAAGTCCAAAGACAGGTCAGCTGCCAAGGCACCAAAAGAGCAACCTAAGGTTGCAGCAAAGCCTATGGGGAATGGCACAGTTGCAAGTGCCTATAACAACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACGAGATAGATGAACATTCTCGTAGCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCAGAAGATCCAAAGGAAAAATCAACGAGTACTGCACCTCGAGTGGACTCTGTTCCAGGATGTGATGTCGATAAACGTGAGAAGATCAGACAGAAGAATGAGAAGAAGCATCAAAGGCAGAAGGAGAGGCGTGCCCAGGAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGGCTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGATCAACAACCTGGGGTTAATTTGAAGATTGATATAACTGATGAACTTGCAAAGATTGCGACCCTGGAGGTTAAATTCAAGTGTACAAAGCAAGAGATTGAAAGGGCTGTTGTTTCTTCCGAGGGTGATCTAGAAAAGGCTGAAGAGGTTTTGAAGACACAGAAGCAAGAATCAACAGCAACTGCATCTAAGCCTGAAGGATCTGGCGATTCAAGTGGCTTGGCTAACAAAGCGCAGCTAATGCTTGCACAGAACCCAACTAGGCCTCAAACAAATGGATTTTCTTCAGTTGGGGCTCAGCAAATGAGGAGAGATGAGAAGGACTTAAACTACAAGCTTTTGTTAAATGGTAGTGGTCCAAAGGAACATGCAGTTAAAGGGTTTCAACCATTGGCACCATCTGTTAAGCCAGAGATGGGCCGACCACAATTTGTTCAACCTGAGAAAAGGCGGCTTAATGCTAATTCGGTTCCATCGGTTTCTTACATCACATCATCCCCTTTACCTGTTGCAGCACCTCAAATAAAGTCTGAAACGCGACATGTGGCAGGGGGCAATGAGGTGAAAAATGCAATGCATAATGGAAACTTGAGAGAGTCGGTAGTTGTAATGCAGCGTCCCCAATCTGCAGCTGCCAAACAAAGCCTGCCATCTACAAGCCATAGTATGTTTGCGTCAGAACCTCCAAGGGAATGGTACTTAAATGGTGCATCAGGTGTGGATATGATGTTGAATGGTGGTTTAGGTCATGGCCTAAGAAATATGAGCTTGGATGGTGTTAATTCTTCCAAGCAGTTTGTGCATGCAAACCATCAACAAAGTTTTGTTTCCAATCCTATAGATCTGGCTGCTAATGGTTGGGGTGGTACCTGGGGCTCTGGAGGTACATCATCTTCCCTTGGTGCGGCTTCATCACTTGGGTTGTTTCGAGGATGGAGCTCGTCCGAGTCGTCTTCATCTCTATCTCGTCCTGATTGGAGAACTAATGGGCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACAT GGTC AACCATGTTCATGGGTGGCAGATCC ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTTCCAATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT GCA GGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA CAAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAACGGACGCCCCTATCTCTCTGAACAAATAGCTCACCAATTGTTCTTTGGTGATCTGTTGCTTTACTTGTTCTGTCTTGCGAATGCTGTTTTTTTTTGGGGGGGTGGGGCTGAGGGAGGGGGTTCATTCCAATGAAGTACTCCTATGTGTTTGTTTTTGGGGCTAACGGATCTTTTGCTTCTACCACTAGGTAATTCAAATATTGTTTAGATGGCTTCATGACTCTCTCTTTGTTTTACATCATTTGT] [+] EMBL CB647762 [ gACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACCACATAGATGAACATTCTCGTATCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCACAACATCCGAAGGAAGAATCAGCGAGTACTGCACCTCGAGTGGACTCTGTTCCACGATGTGATGTCGATAAACGTGAGAAGATCATACAGAAGAATGAGAAGAAGCATCAAAGGCACAATGAGAGGCGTGCCCATCAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGACTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGA ] [+] EMBL BI801164 [ TGGAGAACTAATGGCCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACAT GGTCAAACCATGTTCATGGGT GCAGATCC ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTT CCATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT GCA GGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA C AAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTTAAAAAAAAAa ] [+] EMBL BI811920 [ aTGGCTACACCTCAAT ACTGGA CTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACATGGGTC AACCATGTTCAT GGT GCAGATCC CCAAGACCATCTGGGAACCTTGGTGGTCCA GCATTGCTGGGTTACATGAAAGCCATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATT GCCTTCTTTCT GCACGGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCC TCGAATAAAA CCAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCC GTTGGTTGA CACAGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAA ] [+] EMBL BI811919 [ CCTGGACACGACGTTGTTACCCCCTCCAGCGAAGAGTGAATGCCTGTCCAGACACAT GGTC AACCATGTTCAT GGTGCCAGATCCAACAAGACCATCTGGGAACCTTGGTGGTCCA GCATT CTGGGTTACATGAAACCCATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATTGCCCTTCTTTCTCACACGGGGAGGATCTTCCTAGTTTCCCCTACCCCTGTAGGTAAGAAGCCACTCGAATAAAACCCAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGATCCCACGTTGGTTGACCC AGTTTTACATGTGTATTGAACCCGTGTTTGTGTATCCCTCGACTGTTGGCCCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAA ] [-] EMBL AU225203 [ CCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA CAAAGTAAAAGATGTTATTNGTTTNTGTTCTNGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAgcggc ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||