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Oryza sativa
cluster # 9674 cluster # 9674       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9674#0 length = 2528 sequences # 6  

consensusID : consensus_9674#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2528
fasta sequence
                              [TCGTCTCCCCCCCTCTTTCTACAGCCATCCGCGCCCCGCCCCCCCGCGTCAACCAAACCCTAACTCGCCCAAATCCGCCTCTCGATCTCGCCTCCGCCGTCCGCCGCCGCCGCCGCCGCCGCCGGCCGCCAAAACCCTACCGCCTCTCGTCGCCTCCGTCCGCCGCAGACGCGCCCGGTATACAACAGGGTGATCGTCGGTTGAAAATGCCATCTGCATCCAAATCCAAGTCCAAAGACAGGTCAGCTGCCAAGGCACCAAAAGAGCAACCTAAGGTTGCAGCAAAGCCTATGGGGAATGGCACAGTTGCAAGTGCCTATAACAACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACGAGATAGATGAACATTCTCGTAGCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCAGAAGATCCAAAGGAAAAATCAACGAGTACTGCACCTCGAGTGGACTCTGTTCCAGGATGTGATGTCGATAAACGTGAGAAGATCAGACAGAAGAATGAGAAGAAGCATCAAAGGCAGAAGGAGAGGCGTGCCCAGGAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGGCTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGATCAACAACCTGGGGTTAATTTGAAGATTGATATAACTGATGAACTTGCAAAGATTGCGACCCTGGAGGTTAAATTCAAGTGTACAAAGCAAGAGATTGAAAGGGCTGTTGTTTCTTCCGAGGGTGATCTAGAAAAGGCTGAAGAGGTTTTGAAGACACAGAAGCAAGAATCAACAGCAACTGCATCTAAGCCTGAAGGATCTGGCGATTCAAGTGGCTTGGCTAACAAAGCGCAGCTAATGCTTGCACAGAACCCAACTAGGCCTCAAACAAATGGATTTTCTTCAGTTGGGGCTCAGCAAATGAGGAGAGATGAGAAGGACTTAAACTACAAGCTTTTGTTAAATGGTAGTGGTCCAAAGGAACATGCAGTTAAAGGGTTTCAACCATTGGCACCATCTGTTAAGCCAGAGATGGGCCGACCACAATTTGTTCAACCTGAGAAAAGGCGGCTTAATGCTAATTCGGTTCCATCGGTTTCTTACATCACATCATCCCCTTTACCTGTTGCAGCACCTCAAATAAAGTCTGAAACGCGACATGTGGCAGGGGGCAATGAGGTGAAAAATGCAATGCATAATGGAAACTTGAGAGAGTCGGTAGTTGTAATGCAGCGTCCCCAATCTGCAGCTGCCAAACAAAGCCTGCCATCTACAAGCCATAGTATGTTTGCGTCAGAACCTCCAAGGGAATGGTACTTAAATGGTGCATCAGGTGTGGATATGATGTTGAATGGTGGTTTAGGTCATGGCCTAAGAAATATGAGCTTGGATGGTGTTAATTCTTCCAAGCAGTTTGTGCATGCAAACCATCAACAAAGTTTTGTTTCCAATCCTATAGATCTGGCTGCTAATGGTTGGGGTGGTACCTGGGGCTCTGGAGGTACATCATCTTCCCTTGGTGCGGCTTCATCACTTGGGTTGTTTCGAGGATGGAGCTCGTCCGAGTCGTCTTCATCTCTATCTCGTCCTGATTGGAGAACTAATGGGCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC-GACACAT-GGTC-AACCATGTTCATGGGTGGCAGATCC-ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT-GCA-GGGGAGGATCTTCCTAGTTTCCCCTA-CCCTGTAGGTAAGAAGCCA-TCGAATAAAA-CAAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT-CCA-GTTGGTTGA-CA-AGTTTTACATGTGTATTGAA-CCGTGTTTGTGTAT-CCTCGACTGTTGG-CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAAGCCCCTATCTCTCTGAACAAATAGCTCACCAATTGTTCTTTGGTGATCTGTTGCTTTACTTGTTCTGTCTTGCGAATGCTGTTTTTTTTTGGGGGGGTGGGGCTGAGGGAGGGGGTTCATTCCAATGAAGTACTCCTATGTGTTTGTTTTTGGGGCTAACGGATCTTTTGCTTCTACCACTAGGTAATTCAAATATTGTTTAGATGGCTTCATGACTCTCTCTTTGTTTTACATCATTTGT]

[+] EMBL AK065999             [TCGTCTCCCCCCCTCTTTCTACAGCCATCCGCGCCCCGCCCCCCCGCGTCAACCAAACCCTAACTCGCCCAAATCCGCCTCTCGATCTCGCCTCCGCCGTCCGCCGCCGCCGCCGCCGCCGCCGGCCGCCAAAACCCTACCGCCTCTCGTCGCCTCCGTCCGCCGCAGACGCGCCCGGTATACAACAGGGTGATCGTCGGTTGAAAATGCCATCTGCATCCAAATCCAAGTCCAAAGACAGGTCAGCTGCCAAGGCACCAAAAGAGCAACCTAAGGTTGCAGCAAAGCCTATGGGGAATGGCACAGTTGCAAGTGCCTATAACAACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACGAGATAGATGAACATTCTCGTAGCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCAGAAGATCCAAAGGAAAAATCAACGAGTACTGCACCTCGAGTGGACTCTGTTCCAGGATGTGATGTCGATAAACGTGAGAAGATCAGACAGAAGAATGAGAAGAAGCATCAAAGGCAGAAGGAGAGGCGTGCCCAGGAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGGCTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGATCAACAACCTGGGGTTAATTTGAAGATTGATATAACTGATGAACTTGCAAAGATTGCGACCCTGGAGGTTAAATTCAAGTGTACAAAGCAAGAGATTGAAAGGGCTGTTGTTTCTTCCGAGGGTGATCTAGAAAAGGCTGAAGAGGTTTTGAAGACACAGAAGCAAGAATCAACAGCAACTGCATCTAAGCCTGAAGGATCTGGCGATTCAAGTGGCTTGGCTAACAAAGCGCAGCTAATGCTTGCACAGAACCCAACTAGGCCTCAAACAAATGGATTTTCTTCAGTTGGGGCTCAGCAAATGAGGAGAGATGAGAAGGACTTAAACTACAAGCTTTTGTTAAATGGTAGTGGTCCAAAGGAACATGCAGTTAAAGGGTTTCAACCATTGGCACCATCTGTTAAGCCAGAGATGGGCCGACCACAATTTGTTCAACCTGAGAAAAGGCGGCTTAATGCTAATTCGGTTCCATCGGTTTCTTACATCACATCATCCCCTTTACCTGTTGCAGCACCTCAAATAAAGTCTGAAACGCGACATGTGGCAGGGGGCAATGAGGTGAAAAATGCAATGCATAATGGAAACTTGAGAGAGTCGGTAGTTGTAATGCAGCGTCCCCAATCTGCAGCTGCCAAACAAAGCCTGCCATCTACAAGCCATAGTATGTTTGCGTCAGAACCTCCAAGGGAATGGTACTTAAATGGTGCATCAGGTGTGGATATGATGTTGAATGGTGGTTTAGGTCATGGCCTAAGAAATATGAGCTTGGATGGTGTTAATTCTTCCAAGCAGTTTGTGCATGCAAACCATCAACAAAGTTTTGTTTCCAATCCTATAGATCTGGCTGCTAATGGTTGGGGTGGTACCTGGGGCTCTGGAGGTACATCATCTTCCCTTGGTGCGGCTTCATCACTTGGGTTGTTTCGAGGATGGAGCTCGTCCGAGTCGTCTTCATCTCTATCTCGTCCTGATTGGAGAACTAATGGGCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACAT GGTC AACCATGTTCATGGGTGGCAGATCC ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTTCCAATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT GCA GGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA CAAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAACGGACGCCCCTATCTCTCTGAACAAATAGCTCACCAATTGTTCTTTGGTGATCTGTTGCTTTACTTGTTCTGTCTTGCGAATGCTGTTTTTTTTTGGGGGGGTGGGGCTGAGGGAGGGGGTTCATTCCAATGAAGTACTCCTATGTGTTTGTTTTTGGGGCTAACGGATCTTTTGCTTCTACCACTAGGTAATTCAAATATTGTTTAGATGGCTTCATGACTCTCTCTTTGTTTTACATCATTTGT]
[+] EMBL CB647762             [                                                                                                                                                                                                                                                                                                                                   gACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCATCTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACCACATAGATGAACATTCTCGTATCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTTCTGGTGAGTCACAACATCCGAAGGAAGAATCAGCGAGTACTGCACCTCGAGTGGACTCTGTTCCACGATGTGATGTCGATAAACGTGAGAAGATCATACAGAAGAATGAGAAGAAGCATCAAAGGCACAATGAGAGGCGTGCCCATCAGTTACATGAGCGCTGCAAGGGATACCTAATGTCGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAGCAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGACTATGCAGCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL BI801164             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    TGGAGAACTAATGGCCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACAT GGTCAAACCATGTTCATGGGT GCAGATCC ACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATGAAAGCAATTTT CCATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT GCA GGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA C AAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTTAAAAAAAAAa                                                                                                                                                                                                                                                ]
[+] EMBL BI811920             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             aTGGCTACACCTCAAT  ACTGGA  CTTGACACAACGTTGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCC GACACATGGGTC AACCATGTTCAT GGT GCAGATCC CCAAGACCATCTGGGAACCTTGGTGGTCCA GCATTGCTGGGTTACATGAAAGCCATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATT GCCTTCTTTCT GCACGGGGAGGATCTTCCTAGTTTCCCCTA CCCTGTAGGTAAGAAGCCC TCGAATAAAA CCAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGAT CCC GTTGGTTGA CACAGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAA                                                                                                                                                                                                                                                 ]
[+] EMBL BI811919             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CCTGGACACGACGTTGTTACCCCCTCCAGCGAAGAGTGAATGCCTGTCCAGACACAT GGTC AACCATGTTCAT GGTGCCAGATCCAACAAGACCATCTGGGAACCTTGGTGGTCCA GCATT CTGGGTTACATGAAACCCATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATTGCCCTTCTTTCTCACACGGGGAGGATCTTCCTAGTTTCCCCTACCCCTGTAGGTAAGAAGCCACTCGAATAAAACCCAAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGATCCCACGTTGGTTGACCC AGTTTTACATGTGTATTGAACCCGTGTTTGTGTATCCCTCGACTGTTGGCCCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAAAA                                                                                                                                                                                                                                                 ]
[-] EMBL AU225203             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     CCCCTA CCCTGTAGGTAAGAAGCCA TCGAATAAAA CAAAGTAAAAGATGTTATTNGTTTNTGTTCTNGTTTTGGTCTCAGAT CCA GTTGGTTGA CA AGTTTTACATGTGTATTGAA CCGTGTTTGTGTAT CCTCGACTGTTGG CCGAGATTAGTCATCTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAAAAAAgcggc                                                                                                                                                                                                                                               ]


>consensus_9674#0 TCGTCTCCCCCCCTCTTTCTACAGCCATCCGCGCCCCGCCCCCCCGCGTCAACCAAACCC TAACTCGCCCAAATCCGCCTCTCGATCTCGCCTCCGCCGTCCGCCGCCGCCGCCGCCGCC GCCGGCCGCCAAAACCCTACCGCCTCTCGTCGCCTCCGTCCGCCGCAGACGCGCCCGGTA TACAACAGGGTGATCGTCGGTTGAAAATGCCATCTGCATCCAAATCCAAGTCCAAAGACA GGTCAGCTGCCAAGGCACCAAAAGAGCAACCTAAGGTTGCAGCAAAGCCTATGGGGAATG GCACAGTTGCAAGTGCCTATAACAACTTCTCTGGAAAATTCCATCTGTTGGAGCCATCAT CTTCTTTGCTGGTTAGCCAGGGCAATGACAAATTAAGGAATACAGACGAGATAGATGAAC ATTCTCGTAGCTCCCATGGTACAGGAGACTTTGATTGTGCCTCTAACAATGGTAGCTGTT CTGGTGAGTCAGAAGATCCAAAGGAAAAATCAACGAGTACTGCACCTCGAGTGGACTCTG TTCCAGGATGTGATGTCGATAAACGTGAGAAGATCAGACAGAAGAATGAGAAGAAGCATC AAAGGCAGAAGGAGAGGCGTGCCCAGGAGTTACATGAGCGCTGCAAGGGATACCTAATGT CGAGAAAGCTAGAGGCACTTGCGCAGAAGCTTGTTGCTATGGGTTTCTCATCAGATCAAG CAACAATGGCCCTTATACAGAATGAGGGCTGCCTTGAAGAGTCTGTTGCCTGGCTATGCA GCTTTGATGGAAGTGAGGAAGCCAAACAGCAAACAGCAGCAGATCAACAACCTGGGGTTA ATTTGAAGATTGATATAACTGATGAACTTGCAAAGATTGCGACCCTGGAGGTTAAATTCA AGTGTACAAAGCAAGAGATTGAAAGGGCTGTTGTTTCTTCCGAGGGTGATCTAGAAAAGG CTGAAGAGGTTTTGAAGACACAGAAGCAAGAATCAACAGCAACTGCATCTAAGCCTGAAG GATCTGGCGATTCAAGTGGCTTGGCTAACAAAGCGCAGCTAATGCTTGCACAGAACCCAA CTAGGCCTCAAACAAATGGATTTTCTTCAGTTGGGGCTCAGCAAATGAGGAGAGATGAGA AGGACTTAAACTACAAGCTTTTGTTAAATGGTAGTGGTCCAAAGGAACATGCAGTTAAAG GGTTTCAACCATTGGCACCATCTGTTAAGCCAGAGATGGGCCGACCACAATTTGTTCAAC CTGAGAAAAGGCGGCTTAATGCTAATTCGGTTCCATCGGTTTCTTACATCACATCATCCC CTTTACCTGTTGCAGCACCTCAAATAAAGTCTGAAACGCGACATGTGGCAGGGGGCAATG AGGTGAAAAATGCAATGCATAATGGAAACTTGAGAGAGTCGGTAGTTGTAATGCAGCGTC CCCAATCTGCAGCTGCCAAACAAAGCCTGCCATCTACAAGCCATAGTATGTTTGCGTCAG AACCTCCAAGGGAATGGTACTTAAATGGTGCATCAGGTGTGGATATGATGTTGAATGGTG GTTTAGGTCATGGCCTAAGAAATATGAGCTTGGATGGTGTTAATTCTTCCAAGCAGTTTG TGCATGCAAACCATCAACAAAGTTTTGTTTCCAATCCTATAGATCTGGCTGCTAATGGTT GGGGTGGTACCTGGGGCTCTGGAGGTACATCATCTTCCCTTGGTGCGGCTTCATCACTTG GGTTGTTTCGAGGATGGAGCTCGTCCGAGTCGTCTTCATCTCTATCTCGTCCTGATTGGA GAACTAATGGGCCTTCACCATGTGACTACACCTCAATAGACTGGAGCCTTGACACAACGT TGTTAAACCCTGCAGCGAAGAGTGAATGGCTGTCCGACACATGGTCAACCATGTTCATGG GTGGCAGATCCACAAGACCATCTGGGAACCTTGGTGGTCCAGGCATTGCTGGGTTACATG AAAGCAATTTTCCCATGGATCCTTCTCCATCACCCCGACCCTATGATTGGCCTTCTTTCT GCAGGGGAGGATCTTCCTAGTTTCCCCTACCCTGTAGGTAAGAAGCCATCGAATAAAACA AAGTAAAAGATGTTATTTGTTTCTGTTCTTGTTTTGGTCTCAGATCCAGTTGGTTGACAA GTTTTACATGTGTATTGAACCGTGTTTGTGTATCCTCGACTGTTGGCCGAGATTAGTCAT CTTTCTGTGTATGCTGTGCATGAAAAATGAAGGAAGAAATTGAAGATATCTTGGCTTAAA AAAAAAAGCCCCTATCTCTCTGAACAAATAGCTCACCAATTGTTCTTTGGTGATCTGTTG CTTTACTTGTTCTGTCTTGCGAATGCTGTTTTTTTTTGGGGGGGTGGGGCTGAGGGAGGG GGTTCATTCCAATGAAGTACTCCTATGTGTTTGTTTTTGGGGCTAACGGATCTTTTGCTT CTACCACTAGGTAATTCAAATATTGTTTAGATGGCTTCATGACTCTCTCTTTGTTTTACA TCATTTGT



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)