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Oryza sativa
cluster # 9684 cluster # 9684       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9684#0 length = 1547 sequences # 3  
consensus_9684#1 length = 885 sequences # 2  
consensus_9684#2 length = 808 sequences # 1  

consensusID : consensus_9684#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1547
fasta sequence
                              [GGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTCGTACACGGACCGGTTCGAGCAGCTAACCGGGGAACCTGCGGGGTCGGGACTGGGAGGACGTCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGTGCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCGGCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCGGCAACTCGTCTTCTCCCGCTTCCTCC-AAGGCGTTGGT-GGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTCTCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAATTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTGTTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATAGAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTCTGGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTATAAATTGGTTCACGGGTAACCGCATCAAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTATCTCT]

[+] EMBL BE040934             [GGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTCGTACACGGACCGGTTCGAGCAGCTAACCGGGGAACCTGCGGGGTCGGGACTGGGAGGACGTCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGTGCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCGGCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCGGCAACTCGTCTTCTCCCGCTTTCTCCAAAGGCGTTGGTGGGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCTTCCATCAAATTCAAAATGGGAAAGGGTGCTTCTCAAGAATGGGGGCACAGCATTGGCTGGAGCcgctnc                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CB662088             [                                                                                                                                                                    AAGAGCGTGGAGCAGTGCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCGGCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCGGCAACTCGTCTTCTCCCGCTTCCTCC AAGGCGTTGGT GGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTCTCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAATTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTGTTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATAGAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL AK108757             [                                                                                                                                                                                                                                                                                             TGGAGCAGATCGTCGGCAACTCGTCTTC CCCGCTTCCTCC AAGGCGTTGGT GGCCTCCGACGACGACAACAAGCCACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCACCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTCTCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAATTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTGTTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATAGAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTCTGGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTATAAATTGGTTCACGGGTAACCGCATCAAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTATCTCT]


>consensus_9684#0 GGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTC GTACACGGACCGGTTCGAGCAGCTAACCGGGGAACCTGCGGGGTCGGGACTGGGAGGACG TCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGT GCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCG GCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCG GCAACTCGTCTTCTCCCGCTTCCTCCAAGGCGTTGGTGGCCTCCGACGACGACAACAAGC CACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCA CCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTC TCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAA TTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTG TTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATA GAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAG CGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAG TTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTA TCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTG CCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACG ATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGG AGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAA ATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTT GTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAA GGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGT TGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTT GTCTGGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAA AAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGT ATCCTTGTATAAATTGGTTCACGGGTAACCGCATCAAAGTAGGGCTGTAACCTTGTAAGG CTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTATCTCT



consensusID : consensus_9684#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 885
fasta sequence
                              [GCACAAGGGGCTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGNGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTCTGGGATGCTTGGTGNGTACTATCTGTTCAGTGCCAATTCTCTACAACGAAGGAGAAAAAAAATTGCAGNATCCATTTGTAATGGGATATGTANATTAAANTAGTTTGATGGGCATGCATCCTTGGATNAAATTGGNTCACGGGTAACCGCATCAAAAGTAGGGCTGTAACCCTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGACCAAAAAAAAAAAAA]

[+] EMBL CA767331             [GCACAAGGGGCTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGNGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTCTGGGATGCTTGGTGNGTACTATCTGTTCAGTGCCAATTCTCTACAACGAAGGAGAAAAAAAATTGCAGNATCCATTTGTAATGGGATATGTANATTAAANTAGTTTGATGGGCATGCATCCTTGGATNAAATTGGNTCACGGGTAACCGCATCAAAAGTAGGGCTGTAACCCTGTAAG                                               ]
[-] EMBL CA762599             [                                                                                                                                                                                                                             ACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCGTGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTCTGGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGAAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTAT AAATCGGTTCACGGGTAACCGCATC AAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGACCAAAAAAAAAAAAA]


>consensus_9684#1 GCACAAGGGGCTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAGCGT CACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTG CAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCT TTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCT TGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATT ATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGT TAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATA ATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTG GGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGT TAGCTGCGGTAGAGCATTGNGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGA TTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTTGTC TGGGATGCTTGGTGNGTACTATCTGTTCAGTGCCAATTCTCTACAACGAAGGAGAAAAAA AATTGCAGNATCCATTTGTAATGGGATATGTANATTAAANTAGTTTGATGGGCATGCATC CTTGGATNAAATTGGNTCACGGGTAACCGCATCAAAAGTAGGGCTGTAACCCTGTAAGGC TGTTGTTGAAGTTTAGTGTTGTATTGGGGACCAAAAAAAAAAAAA



consensusID : consensus_9684#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 808
fasta sequence
                              [CAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTATAAATTGGTTCACGGGTAACCGCATCAAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTTAAAAAAAAAAAAAG]

[-] EMBL CB662089             [CAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTATAAATTGGTTCACGGGTAACCGCATCAAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTTAAAAAAAAAAAAAG]


>consensus_9684#2 CAGTGATGAATGCAGTACTGCTCCAAGCGTCACTAGAAAAGATAGGTGTGGAGACACGAG TCCAAACTGCACTGATGATGCAAGAAGTTGCAGAGCCATACATAAGGCGACGAGCCATAC GCCATCTTGAAAAAGGAAGGGTCGTTATCTTTGCTGGTATTGGTGCTGGCATAGGAAATC CACTTTTCACCACAGATACAGCTGCTGCCTTGAGAGCTTCTGAAATCAATGCAGATGTTG TGCTTAAAGGTACCGCCGGAGATGACGATTATGGTTGTCCTCCTAGGGGCAACAACAATC CACCTTTTGAGCACATCTCATTTAGGGAGTTAGCGGCTAGAGGATTCAGCAGAATGGATA TGACAGCGATTACATGTTGTCAGGAAAATAATATTCCTGTTGTCATCTTCAACATGTTAG AGCCTGGCAATATCTCCAAAGCAATTTGTGGGGATCAAGTAGGTACATTAGTTGACCAAT CAGGAAGGATTACATAAACTTTAAGAAGGTTAGCTGCGGTAGAGCATTGGGTCATGCCCG TACTATGGGGGTAGCCTGCATATTGGTTGATTTTTGTGGATGCTTGTTGTGTACTATCTG TTCAGTGCCAATTCTCTACAACGGAGGAGAAAAAAAATTGTAGTATCCATTTGTAATGTG ATATGTAGATTAGATTAGTTTGATGGGCATGTATCCTTGTATAAATTGGTTCACGGGTAA CCGCATCAAAGTAGGGCTGTAACCTTGTAAGGCTGTTGTTGAAGTTTAGTGTTGTATTGG GGAACAGCATTTTTAAAAAAAAAAAAAG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9684#0      GGAGTACCGCAAGGACCGGGAGGAGTGGACGGACGGCGCCATCAGCAGCCTCCTCGACTC 60
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      GTACACGGACCGGTTCGAGCAGCTAACCGGGGAACCTGCGGGGTCGGGACTGGGAGGACG 120
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      TCGCCGCCGCCGTGAGCGACGGGCAGGGCAAGAGCAGCGGGGGCAAGAGCGTGGAGCAGT 180
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      GCAAGAACAAGATCGACAACCTCAAGAAGCGGTACAAGGTGGAGTGCCAGCGGCTCGCCG 240
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      GCTCGGGGGCCTCTGCCGTCAGCCACTGGCCCTGGTTCAAGAAGATGGAGCAGATCGTCG 300
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      GCAACTCGTCTTCTCCCGCTTCCTCCAAGGCGTTGGTGGCCTCCGACGACGACAACAAGC 360
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      CACGGCAACCGCAGCAGCATAGCAGCAAAAGGCACGCTCCTTCTGGCAGTAGCACCCCCA 420
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      CCTTCGGCGGCAGCTCCAGATTGGCCCCTCCATCAAATCCAAAATGGAAAAGGGTGCTTC 480
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      TCAAGATTGGGGGCACAGCATTGGCTGGAGCGCCTCCTCAAAATGTTGATCCTAAGGTAA 540
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      TTATGCTGATTGCCCGAGAAGTTCAAGTGGCATGCCGCCATGGTGTTGAGGTGTCAATTG 600
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      TTGTGGGAGGTCGGAATATATTCTGCGGCGACACTTGGGTTTCTGCAACGGGCACTGATA 660
consensus_9684#2      ------------------------------------------------------------
consensus_9684#1      ------------------------------------------------------------
                                                                                  

consensus_9684#0      GAGCTTCAACATACTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAG 720
consensus_9684#2      ---------------------------------CAGTGATGAATGCAGTACTGCTCCAAG 27
consensus_9684#1      ---GCACAAGGGGCTCAATCGGGATGATGGCATCAGTGATGAATGCAGTACTGCTCCAAG 57
                                                       ***************************

consensus_9684#0      CGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAG 780
consensus_9684#2      CGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAG 87
consensus_9684#1      CGTCACTAGAAAAGATAGGTGTGGAGACACGAGTCCAAACTGCACTGATGATGCAAGAAG 117
                      ************************************************************

consensus_9684#0      TTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTA 840
consensus_9684#2      TTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTA 147
consensus_9684#1      TTGCAGAGCCATACATAAGGCGACGAGCCATACGCCATCTTGAAAAAGGAAGGGTCGTTA 177
                      ************************************************************

consensus_9684#0      TCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTG 900
consensus_9684#2      TCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTG 207
consensus_9684#1      TCTTTGCTGGTATTGGTGCTGGCATAGGAAATCCACTTTTCACCACAGATACAGCTGCTG 237
                      ************************************************************

consensus_9684#0      CCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACG 960
consensus_9684#2      CCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACG 267
consensus_9684#1      CCTTGAGAGCTTCTGAAATCAATGCAGATGTTGTGCTTAAAGGTACCGCCGGAGATGACG 297
                      ************************************************************

consensus_9684#0      ATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGG 1020
consensus_9684#2      ATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGG 327
consensus_9684#1      ATTATGGTTGTCCTCCTAGGGGCAACAACAATCCACCTTTTGAGCACATCTCATTTAGGG 357
                      ************************************************************

consensus_9684#0      AGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAA 1080
consensus_9684#2      AGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAA 387
consensus_9684#1      AGTTAGCGGCTAGAGGATTCAGCAGAATGGATATGACAGCGATTACATGTTGTCAGGAAA 417
                      ************************************************************

consensus_9684#0      ATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTT 1140
consensus_9684#2      ATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTT 447
consensus_9684#1      ATAATATTCCTGTTGTCATCTTCAACATGTTAGAGCCTGGCAATATCTCCAAAGCAATTT 477
                      ************************************************************

consensus_9684#0      GTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAA 1200
consensus_9684#2      GTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAA 507
consensus_9684#1      GTGGGGATCAAGTAGGTACATTAGTTGACCAATCAGGAAGGATTACATAAACTTTAAGAA 537
                      ************************************************************

consensus_9684#0      GGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGT 1260
consensus_9684#2      GGTTAGCTGCGGTAGAGCATTGGGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGT 567
consensus_9684#1      GGTTAGCTGCGGTAGAGCATTGNGTCATGCCCGTACTATGGGGGTAGCCTGCATATTGGT 597
                      ********************** *************************************

consensus_9684#0      TGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTT 1320
consensus_9684#2      TGATTTTTGTGGATGC-------------------------------------------- 583
consensus_9684#1      TGATTTTTGTGGATGCGAGAGCGGGCATGTTCCTTGGACAGAAGGCTCCCACCTTGATTT 657
                      ****************                                            

consensus_9684#0      GTCTGGGATGCTTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAA 1380
consensus_9684#2      -----------TTGTTGTGTACTATCTGTTCAGTGCCAATTCTCTACAACGGAGGAGAAA 632
consensus_9684#1      GTCTGGGATGCTTGGTGNGTACTATCTGTTCAGTGCCAATTCTCTACAACGAAGGAGAAA 717
                                 *** ** ********************************* ********

consensus_9684#0      AAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGT 1440
consensus_9684#2      AAAAATTGTAGTATCCATTTGTAATGTGATATGTAGATTAGATTAGTTTGATGGGCATGT 692
consensus_9684#1      AAAAATTGCAGNATCCATTTGTAATGGGATATGTANATTAAANTAGTTTGATGGGCATGC 777
                      ******** ** ************** ******** **** * **************** 

consensus_9684#0      ATCCTTGTATAAA-TTGGTTCACGGGTAACCGCATCAAA-GTAGGGCTGTAACCTTGTAA 1498
consensus_9684#2      ATCCTTGTATAAA-TTGGTTCACGGGTAACCGCATCAAA-GTAGGGCTGTAACCTTGTAA 750
consensus_9684#1      ATCCTTGGATNAAATTGGNTCACGGGTAACCGCATCAAAAGTAGGGCTGTAACCCTGTAA 837
                      ******* ** ** **** ******************** ************** *****

consensus_9684#0      GGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTATCTCT--------- 1547
consensus_9684#2      GGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGAACAGCATTTTTAAAAAAAAAAAAAG 808
consensus_9684#1      GGCTGTTGTTGAAGTTTAGTGTTGTATTGGGGACCAAAAAAAAAAAAA---------- 885
                      ********************************* **  *                   




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)