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Oryza sativa
cluster # 9697 cluster # 9697       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9697#0 length = 2451 sequences # 5  
consensus_9697#1 length = 741 sequences # 1  

consensusID : consensus_9697#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2451
fasta sequence
                              [CTCCTCCTCCGCAAGCCCAGCCCTGACGTTGTCTCGGACACCCAAAGGCTGTGTTTGATCTCCGCCCGCCACCTGTCTTCCTCCTCCTGCTGCGCGCGCGCCTGCTTCTTCTTCCCGTTGAGCCAGAGAGCGGTTCTTGGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAAGGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCAATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTATGGTGTGGATTCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCGAAAGTAACATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGCTACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTTTGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCAAGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTG-CCCATTTTCCAAACATTGCAGCTGAATGCCTGCGCCACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCATTACATGTGTGGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTATGTTGCTGGTGAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTCACTGCTTGAAGCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACACCCATACAAATTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGGCTGAACCAGCCTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTTCATTGGCTACAAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCTACCGTTCTCATATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATCTACAGAGATTGTAGTATTTTTTTTTTCTAAAAGAATTGGCAGGAATCAATTTGTAGTATAGGATCAAAGATGGTTGTATAAATCGATTCGATTGAAGGGATAGACTCCCAACTCAA]

[+] EMBL AK072394             [CTCCTCCTCCGCAAGCCCAGCCCTGACGTTGTCTCGGACACCCAAAGGCTGTGTTTGATCTCCGCCCGCCACCTGTCTTCCTCCTCCTGCTGCGCGCGCGCCTGCTTCTTCTTCCCGTTGAGCCAGAGAGCGGTTCTTGGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAAGGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCAATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTATGGTGTGGATTCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCGAAAGTAACATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGCTACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTTTGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCAAGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTG CCCATTTTCCAAACATTGCAGCTGAATGCCTGCGCCACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCATTACATGTGTGGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTATGTTGCTGGTGAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTCACTGCTTGAAGCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAGTGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACACCCATACAAATTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGGCTGAACCAGCCTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTTCATTGGCTACAAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCTACCGTTCTCATATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATCTACAGAGATTGTAGTATTTTTTTTTTCTAAAAGAATTGGCAGGAATCAATTTGTAGTATAGGATCAAAGATGGTTGTATAAATCGATTCGATTGAAGGGATAGACTCCCAACTCA ]
[+] EMBL BF430747             [                                                                                                                                                                                                                         GGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAA GGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTATGGTGTGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL CB663873             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GTGGATTCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCAAAAGTAACATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGCTACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGCAATATCTAATATGGAGTTTGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCAAGAATCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTGCCCCATTTTCCAAACATTGCAGCTGAATGCCTGCGCCACGGGCTCGACATCACACAACAGCCGATACCTGTTGTCCCTGCAGCTCATTACATGTGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ]
[-] EMBL CB628388             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ATATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACACCCATACAAATTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGGCTGAACCAGCCTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTTCATTGGCTACAAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCTACCGTTCTCATATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATGTACAGAGATTGTAGTATTTTTTTTTTCTAAAAa                                                                                   ]
[-] EMBL CB663874             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ATGGTCGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACACCCATACAAATTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGGCTGAACCAGCCTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTTCATTGGCTACAAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCTACCGTTCTCATATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATCTACAGAGATTGTAGTA  TTTTTTTTCTAAAAGAATTGGCAGGAATCAATTTGTAGTATAGGATCAAAGATGGTTGTATAAATCGATTCGATTGAAGGGATAGACTCCCAACTCAA]


>consensus_9697#0 CTCCTCCTCCGCAAGCCCAGCCCTGACGTTGTCTCGGACACCCAAAGGCTGTGTTTGATC TCCGCCCGCCACCTGTCTTCCTCCTCCTGCTGCGCGCGCGCCTGCTTCTTCTTCCCGTTG AGCCAGAGAGCGGTTCTTGGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGG AGCCTCCAAGGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATG GCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTC ATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATC AGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTC ATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTC GCAATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGGCGGTGT CAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGC GGGGGCTTATCTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCG TGTGAAGGAGCTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCA CCTTGCAAGGGAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGG AAGAGAGATCGAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTT TGGCCACCACTTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTA TGGTGTGGATTCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCGAAAGTAAC ATTGCTTGCATCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGC TACTGGGGATGGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTT TGTGCAGTTCCACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAG AAGAGAGAATGCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAA TCAGTCCATGGAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGA TGTGGTCGCAAGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCT GGATATCAGTCACAAGCCAAGGGAAAAGGTTCTTGCCCATTTTCCAAACATTGCAGCTGA ATGCCTGCGCCACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCA TTACATGTGTGGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTA TGTTGCTGGTGAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTC ACTGCTTGAAGCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGT CGATGCAGATGTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTC CCTTAGGGACAGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCT TCAGTCAATAATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGC GGAATGGAAGATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTG GAAGCCTACAATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAA GCTGGTTGTGAAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGA CTTCCCTTACCTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCA GGAGCTGACATGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACA CCCATACAAATTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGG CTGAACCAGCCTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTT CATTGGCTACAAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCT ACCGTTCTCATATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATCTACAG AGATTGTAGTATTTTTTTTTTCTAAAAGAATTGGCAGGAATCAATTTGTAGTATAGGATC AAAGATGGTTGTATAAATCGATTCGATTGAAGGGATAGACTCCCAACTCAA



consensusID : consensus_9697#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 741
fasta sequence
                              [CTTTCCCTTTTTTTGTTGTTGTTGTTGGAATTTTCACATGTGTTTGGCATGATCTCGAAACAGCAGCGATCTTTGTATGATCTCCATGTTTGTTGGGATTTGGTGATGTGATATTGTGATGTGATTCATCGGGATCTTCTCCTCCTTTTTCGTCTGGTTTAGATGCTGCATCTGCATGCGTGCTCGCTGAGAAATCCCCCGTTTGTTTTCGCTCATCTTGATCTGTGTCTGTTGCTTTCGTCTCGTCTTGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAATGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCA]

[+] EMBL CB628387             [CTTTCCCTTTTTTTGTTGTTGTTGTTGGAATTTTCACATGTGTTTGGCATGATCTCGAAACAGCAGCGATCTTTGTATGATCTCCATGTTTGTTGGGATTTGGTGATGTGATATTGTGATGTGATTCATCGGGATCTTCTCCTCCTTTTTCGTCTGGTTTAGATGCTGCATCTGCATGCGTGCTCGCTGAGAAATCCCCCGTTTGTTTTCGCTCATCTTGATCTGTGTCTGTTGCTTTCGTCTCGTCTTGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAATGCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCTCTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGAAGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTGCAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCGGTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTACCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGCGGTGTCAGCGCGGTTCTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATCTGTGTGATGAAGAGACTGTCA]


>consensus_9697#1 CTTTCCCTTTTTTTGTTGTTGTTGTTGGAATTTTCACATGTGTTTGGCATGATCTCGAAA CAGCAGCGATCTTTGTATGATCTCCATGTTTGTTGGGATTTGGTGATGTGATATTGTGAT GTGATTCATCGGGATCTTCTCCTCCTTTTTCGTCTGGTTTAGATGCTGCATCTGCATGCG TGCTCGCTGAGAAATCCCCCGTTTGTTTTCGCTCATCTTGATCTGTGTCTGTTGCTTTCG TCTCGTCTTGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAAT GCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCT CTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGA AGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTG CAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCG GTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTA CCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGCGGTGTCAGCGCGGTTC TATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTATC TGTGTGATGAAGAGACTGTCA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9697#0      ------------------------------------------------------------
consensus_9697#1      CTTTCCCTTTTTTTGTTGTTGTTGTTGGAATTTTCACATGTGTTTGGCATGATCTCGAAA 60
                                                                                  

consensus_9697#0      ---------------------CTCCTCCTCCGCAAG--CCCAGC--CCTGACGTTGTCTC 35
consensus_9697#1      CAGCAGCGATCTTTGTATGATCTCCATGTTTGTTGGGATTTGGTGATGTGATATTGTGAT 120
                                           ****   *  *   *      *     ***  ****   

consensus_9697#0      GGA---CACCCAAAGGCTGTGTTTGATCTCCGCCCGCCACCTGTCTTCCTCCT------- 85
consensus_9697#1      GTGATTCATCGGGATCTTCTCCTCCTTTTTCGTCTGGTTTAGATGCTGCATCTGCATGCG 180
                      *     ** *   *   * *  *   * * ** * *       *  * *  **       

consensus_9697#0      --CCTGCTGCGCGCGCGCCTGCTTCTTCT---TCCCGTTGAGCCA-GAGAGCGGTTCTTG 139
consensus_9697#1      TGCTCGCTGAGAAATCCCCCGTTTGTTTTCGCTCATCTTGATCTGTGTCTGTTGCTTTCG 240
                        *  **** *    * ** * ** ** *   **   **** *   *   *  * * * *

consensus_9697#0      ---------GTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAAG 190
consensus_9697#1      TCTCGTCTTGTGCAGAGCCGGGGATGGCGGCTCTGATGAACGGCTTTGGGAGCCTCCAAT 300
                               ************************************************** 

consensus_9697#0      GCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCT 250
consensus_9697#1      GCAAGGCGACGGTGCATGTCGAGAAAGGGCACATGCAAGCATCGGGGATGGCCTTCTTCT 360
                      ************************************************************

consensus_9697#0      CTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGA 310
consensus_9697#1      CTCCCGTCAACAGATGCGCCCAGGTTCATATCTCCAGTATTCCTCATTTCATCGGCGCGA 420
                      ************************************************************

consensus_9697#0      AGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTG 370
consensus_9697#1      AGTCTGTTAGTGCTTCCCAACTTCGAATGAGGCACAAGGTCGGGTCCATCAGAGCCTCTG 480
                      ************************************************************

consensus_9697#0      CAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCG 430
consensus_9697#1      CAGCCTCGTGCTTGCAAGATGAAACAACAAAATATTTCGATTTTGTGGTCATTGGCAGCG 540
                      ************************************************************

consensus_9697#0      GTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCAATCATTA 490
consensus_9697#1      GTGTTGCTGGCCTAAGGTATGCTCTGGAAGTGTCTAAGTACGGCTCTGTCGCCATCATTA 600
                      **************************************************** *******

consensus_9697#0      CCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGGGCGGTGTCAGCGCGGTT 550
consensus_9697#1      CCAAAGCAGAGCCTCATGAGAGCAACACGAACTACGCACAAGG-CGGTGTCAGCGCGGTT 659
                      ******************************************* ****************

consensus_9697#0      CTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTAT 610
consensus_9697#1      CTATGCCCCTCAGATTCTGTAGAGAGCCACATGCAAGACACCATTGTCGCGGGGGCTTAT 719
                      ************************************************************

consensus_9697#0      CTGTGTGATGAAGAGACTGTCAGGGTAGTATGCACAGAAGGACCGGAGCGTGTGAAGGAG 670
consensus_9697#1      CTGTGTGATGAAGAGACTGTCA-------------------------------------- 741
                      **********************                                      

consensus_9697#0      CTCATTGCCATGGGAGCTTCATTTGACCATGGCGAGGACGGAAGGCTGCACCTTGCAAGG 730
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GAAGGTGGACATTCTCACAACAGAATAGTTCATTCTGCTGATATGACTGGAAGAGAGATC 790
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GAGAGAGCACTGCTTCAAGCAGTTGATAATGATGATAACATATCTTTGTTTGGCCACCAC 850
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TTTGCCATTGATTTACTCACCTGTCAGAGTAATGGTGAAATATATTGCTATGGTGTGGAT 910
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TCATTGGACGCTGAAACTCAGAAGGCAATTCGTTTCATCTCGAAAGTAACATTGCTTGCA 970
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TCTGGAGGAGTTGGTCATATATACCCCTCAACGACCAATCCACCGGTAGCTACTGGGGAT 1030
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GGAATTGCAATGTCTCATCGTGCGCAGGCTGTAATATCTAATATGGAGTTTGTGCAGTTC 1090
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      CACCCAACTGCACTATCAGATGAGGGTCTCCCAATAAAACCAGCTACAAGAAGAGAGAAT 1150
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GCATTCCTCATAACAGAAGCAGTCAGAGGAGATGGAGGAATTCTTTATAATCAGTCCATG 1210
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GAGAGGTTTATGACTTCGTATGATGACCGTGCAGAGTTAGCACCGAGAGATGTGGTCGCA 1270
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      AGAAGCATAGATGACCAACTGAAGAAGAGGGGAGAAAAGTATGTCCTCCTGGATATCAGT 1330
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      CACAAGCCAAGGGAAAAGGTTCTTGCCCATTTTCCAAACATTGCAGCTGAATGCCTGCGC 1390
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      CACGGTCTCGACATCACACAACAGCCGATACCTGTTGTTCCTGCAGCTCATTACATGTGT 1450
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GGGGGTGTCCGGGCTGGGTTGCAGGGGGAGACAAATGTGAAAGGCCTGTATGTTGCTGGT 1510
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GAGGTTGCATGCACTGGATTGCACGGTGCTAATCGGCTTGCAAGCAACTCACTGCTTGAA 1570
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GCACTGGTGTTTGCTCGGAGAGCAGTGCAGCCTTCAATAGATCATATGGTCGATGCAGAT 1630
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GTCGATCCTTCTTTCGCGAAGAAATGGGCTCGTCCTGTGCTGTCTGTCTCCCTTAGGGAC 1690
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      AGTATACTATCTGATATCATTGAGAAGACAAAGCAGGCCAGGATGGAGCTTCAGTCAATA 1750
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      ATGTGGGAGTATGTCGGGATAGTGCGGTCGACGAACCGCCTGAAGCACGCGGAATGGAAG 1810
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      ATCAGTGATCTGGAGTCAGAATGGGAGGAGTTCTTGTTCAGGAGGGGGTGGAAGCCTACA 1870
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      ATGGTGGGGGTTGAGACCTGTGAAATGAGGAACCTCTTCTGCTGCGCAAAGCTGGTTGTG 1930
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      AAAAGTGCTCTTGCAAGGCACGAGAGCCGAGGCTTGCACTTCACCGAAGACTTCCCTTAC 1990
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      CTGGAGGAGAGCAAGAGGAAGCCTACAGTGATCTTCCCTACTCATATCCAGGAGCTGACA 2050
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TGGAGCTCAAAGCCATTGCAGAAGCAGCTGCAGTGCAAGTAGATGGCACACCCATACAAA 2110
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TTACAAAGGGAGTTTGGGATTGCAGATTCCATTAATTTATTAAAATTAGGCTGAACCAGC 2170
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      CTGCTATTTGACAATAAACACATGAATTCAACCTGGAATTGTGAGAAGTTCATTGGCTAC 2230
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      AAGCCTACAATTAGGCTTGAAGTAGCATGTATTTAACAACTGTTTGTTCTACCGTTCTCA 2290
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      TATGATTCAGCTGTTGTAAGATGTAAACGAGGTTGTGTTCTGATCTACAGAGATTGTAGT 2350
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      ATTTTTTTTTTCTAAAAGAATTGGCAGGAATCAATTTGTAGTATAGGATCAAAGATGGTT 2410
consensus_9697#1      ------------------------------------------------------------
                                                                                  

consensus_9697#0      GTATAAATCGATTCGATTGAAGGGATAGACTCCCAACTCAA 2451
consensus_9697#1      -----------------------------------------
                                                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)