These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9703#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 956 fasta sequence [TTAACCCTCCTAAAGGAATAGCTTGGGCCGCGGCCGCCGCGGCGGGCGCGGATCGGGTGCGGTGGGACTACCGCGGGCAGCGCCAGCTGGTGCCGCTCGGGCAGTGGATGCCCAAGGTGGCCGTCGACGCCTACGTCGCCCCTGAGGCCGTGCTGGCCGGGCAGGTCACCGTCTACGACGGCGCCTCCGTGTGGAGCGGCGCCGTGCTGCGCGGTGACCTCAACAAGATCACCCTCGGCTTCTGCGCCAACGTCCAGGAGCGATGCGTCCTCCACGCCGCCTGGTCGGCGCCCACAGGGCTTCCAGCTGACACCCTTGTTGACCGGTATGTGACAGTGGGTGCATACTGTCTGTTGCGCTCATGCACTATTGAACCTGAGTGCATCATCGGTCAGCATTCCATCCTCATGGAAGGTTCATTGGTTGAAACCAACTCGATCCTTGAAGCTGGCTCTGTCCTGCCCCCTGGAAGGAGGATTCCAACTGGTGAGCTCTGGGCTGGTAATCCAGCTAGGTTTGTTCGGAAGCTAACCAATGAAGAGATCATGGAAATCCCAAAGCTCGCGGTGGCAATCAACGATTTGATGCAAAGCCATTTTTCGGAGTTCCTTCCGTACTCCACTGCTTATTTGGAGGT-GGAGAAGTTGAAGAAATCGTTTTCAATTCCTCTGTA--AGCATGTTTTTTTTGTCACCTTCTCCGCCAAATGAACGAGAAAATAAAGCAGCCCANAGTACCTAGATGTTTTGTATTGAATCTAACTTGTAACTTGGGTGGATGTGTTACGTTGTGAATTTTTCGTTCATTGTTGTTGTCAACTTGGGGACAGGCGTTAAGGACCATGTCTGAATGCATTGCTTTCGCTTCTCACTACCGGTATTTTCCGGCTGGGAAACATACCTTGTGCCATTGAGAAAACATGTACAGTATATTGTGGGATTGTGTCTGGAAAAAAAAA] [+] EMBL BI305508 [TTAACCCTCCTAAAGGAATAGCTTGGGCCGCGGCCGCCGCGGCGGGCGCGGATCGGGTGCGGTGGGACTACCGCGGGCAGCGCCAGCTGGTGCCGCTCGGGCAGTGGATGCCCAAGGTGGCCGTCGACGCCTACGTCGCCCCTGAGGCCGTGCTGGCCGGGCAGGTCACCGTCTACGACGGCGCCTCCGTGTGGAGCGGCGCCGTGCTGCGCGGTGACCTCAACAAGATCACCCTCGGCTTCTGCGCCAACGTCCAGGAGCGATGCGTCCTCCACGCCGCCTGGTCGGCGCCCACAGGGCTTCCAGCTGACACCCTTGTTGACCGGTATGTGACAGTGGGTGCATACTGTCTGTTGCGCTCATGCACTATTGAACCTGAGTGCATCATCGGTCAGCATTCCATCCTCATGGAAGGTTCATTGGTTGAAACCAACTCGATCCTTGAAGCTGGCTCTGTCCTGCCCCCTGGAAGGAGGATTCCAACTGGTGAGCTCTGGGCTGGTAATCCAGCTAGGTTTGTTCGGAAGCTAACCAATGAAGAGATCATGGAAATCCCAAAGCTCGCGGTGGCAATCAACGATTTGATGCAAAGCCATTTTTCGGAGTTCCTTCCGTACTCCACTGCTTATTTGGAGGT GGAGAAGTTGAAGAAATCGTTTTCAATTCCTCTGNT AGCATGTTTTTTTTGTCACCTTCTCCGCCAAATGAACGAGAAAATAAAGCAGCCCANAGTACCTAGATGTTTTGTATTGAATCTAACTTGTAACTTGGG ] [+] EMBL BI306581 [ actaAGCTTGGGCCGCGGCCGCCGCGGCGGGCGCGGATCGGGTGCGGTGGGACTACCGCGGGCAGCGCCAGCTGGTGCCGCTCGGGCAGTGGATGCCCAAGGTGGCCGTCGACGCCTACGTCGCCCCTGAGGCCGTGCTGGCCGGGCAGGTCACCGTCTACGACGGCGCCTCCGTGTGGAGCGGCGCCGTGCTGCGCGGTGACCTCAACAAGATCACCCTCGGCTTCTGCGCCAACGTCCAGGAGCGATGCGTCCTCCACGCCGCCTGGTCGGCGCCCACAGGGCTTCCAGCTGACACCCTTGTTGACCGGTATGTGACAGTGGGTGCATACTGTCTGTTGCGCTCATGCACTATTGAACCTGAGTGCATCATCGGTCAGCATTCCATCCTCATGGAAGGTTCATTGGTTGAAACCAACTCGATCCTTGAAGCTGGCTCTGTCCTGCCCCCTGGAAGGAGGATTCCAACTGGTGAGCTCTGGGCTGGTAATCCAGCTAGGTTTGTTCGGAAGCTAACCAATGAAGAGATCATGGAAATCCCAAAGCTCGCGGTGGCAATCAACGATTTGATGCAAAGCCATTTTTCGGAGTTCCTTCCGTACTCCACTGCTTATTTGGAGGTGGGAGAAGTTGAAGAAATCGTTTTCAATTCCTCTGTA AGCATGTTTTTTTTGTCACCTTCTNCGCCAAATGAACGAGAAAATAAAGCAGCCCANAGTACCTAGATGTTTTGTATTGAATCTAACTTG ] [+] EMBL BI305632 [ CGCCGCGGCGGGCGCGGATCGGGTGCGGTGGGACTACCGCGGGCAGCGCCAGCTGGTGCCGCTCGGGCAGTGGATGCCCAAGGTGGCCGTCGACGCCTACGTCGCCCCTGAGGCCGTGCTGGCCGGGCAGGTCACCGTCTACGACGGCGCCTCCGTGTGGAGCGGCGCCGTGCTGCGCGGTGACCTCAACAAGATCACCCTCGGCTTCTGCGCCAACGTCCAGGAGCGATGCGTCCTCCACGCCGCCTGGTCGGCGCCCACAGGGCTTCCAGCTGACACCCTTGTTGACCGGTATGTGACAGTGGGTGCATACTGTCTGTTGCGCTCATGCACTATTGAACCTGAGTGCATCATCGGTCAGCATTCCATCCTCATGGAAGGTTCATTGGTTGAAACCAACTCGATCCTTGAAGCTGGCTCTGTCCTGCCCCCTGGAAGGAGGATTCCAACTGGTGAGCTCTGGGCTGGTAATCCAGCTAGGTTTGTTCGGAAGCTAACCAATGAAGAGATCATGGAAATCCCAAAGCTCGCGGTGGCAATCAACGATTTGATGCAAAGCCATTTTTCGGAGTTCCTTCCGTACTCCACTGCTTATTTGGAGGT GGAGAAGTTGAAGAAATCGTTTTCAATTCCTCTGTA AGCATGTTTTTTTTGTCACCTTCTCCGCCAAATGAACGAGAAAATAAAGCAGCCCAAAGTACCTAGATGTTTTGTATTGAATCTAACTTGTAACTTTGGTGGATGTGTTA ] [+] EMBL BU673727 [ tttggCGCCGCGGCGGGCGCGGATCGGGTGCGGTGGGACTACCGCGGGCAGCGCCAGCTGGTGCCGCTCGGGCAGTGGATGCCCAATGTGGCCGTCGACGCCTACGTCGCCCCTGAGGCCGTGCTGGCCGGGCAGGTCACCGTCTACGACGGCGCCTCCGTGTGGAGCGGCGCCGTGCTGCGCGGTGACCTCAACAAGATCACCCTCGGCTTCTGCGCCAACGTCCAGGAGCGATGCGTCCTCCACGCCGCCTGGTCGGCGCCCACAGGGCTTCCAGCTGACACCCTTGTTGACCGGTATGTGACAGTGGGTGCATACTGTCTGGTGCGCTCATGCACTA ] [+] EMBL CA754050 [ ACTGCTTATTTGGAGGT GGAGAAGTTGAAGAAATCGTTTTCAATTCCTCTGTAAGAGCTCTTTTTTTTTGTCACCTTCTCCGCCAAATGAACGAGAAAATAAAGCAGCCCAAAGTACCTAGATGTTTTGTATTGAATCTAACTTGTAACTTGGGTGGATGTGTTACGTTGTGAATTTTTCGTTCATTGTTGTTGTCAACTTGGGGACAGGCGTTAAGGACCATGTCTGAATGCATTGCTTTCGCTTCTCACTACCGGTATTTTCCGGCTGGGAAACATACCTTGTGCCATTGAGAAAACATGTACAGTATATTGTGGGATTGTGTCTGGAAAAAAAAA] [+] EMBL CF313738 [ GGACAGGCGTTAAGGACCATGTCTGAATGCATTGCTTTCGCTTCTCACTACCGGTATTTTCCG ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||