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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9706 cluster # 9706       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9706#0 length = 278 sequences # 6  

consensusID : consensus_9706#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 278
fasta sequence
                              [GACGCGGCACAAATACCGCATTTATTGC--ATCAGC-T-GCAGC-TGTG-CGTG-GTGACG-ACGA--CGCTACGGGGATGA-AGGTGGTGTGGTG-GTTGCTC-TTGTGTCGCGA-GAGCTTC-GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCGTGGCGCGTG]

[+] EMBL CB966093             [GACGCGGCACAAATACCGCATTTATTGCNGATCAGCGTAGCAGCGTGTGCCGTGTGTGACGNACGANNCGCTACGGGGATGACAGGTGGTGTGGTGNGTTGCTCNTTGTGTCGCGANGAGCTTCNGCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCG         ]
[+] EMBL BI305780             [GACGCGGCACAAATACCGCATTTATTGC  ATCAGC T GCAGC TGTG CGTG GTGACG ACGA  CGCTACGGGGATGA AGGTGGTGTGGTG GTTGCTC TTGTGTCGCGA GAGCTTC GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCGTGGCGCGTG]
[+] EMBL BU673585             [GACGCGGCACAAATACCGCATTTATTGC  ATCAGC T GCAGC TGTG CGTG GTGACG ACGA  CGCTACGGGGATGA AGGTGGTGTGGTG GTTGCTC TTGTGTCGCGA GAGCTTC GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCG         ]
[+] EMBL CB965170             [GACGCGGCACAAATACCGCATTTATTGC  ATCAGC T GCAGC TGTG CGTG GTGACG ACGA  CGCTACGGGGATGA AGGTGGTGTGGTG GTTGCTC TTGTGTCGCGA GAGCTTC GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCG         ]
[+] EMBL CB965492             [GACGCGGCACAAATACCGCATTTATTGC  ATCAGC T GCAGC TGTG CGTG GTGACG ACGA  CGCTACGGGGATGA AGGTGGTGTGGTG GTTGCTC TTGTGTCGCGA GAGCTTC GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCG         ]
[+] EMBL CB967228             [GACGCGGCACAAATACCGCATTTATTGC  ATCAGC T GCAGC TGTG CGTG GTGACG ACGA  CGCTACGGGGATGA AGGTGGTGTGGTG GTTGCTC TTGTGTCGCGA GAGCTTC GCGCCTGGGGCTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTGCCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACTCACTCATTCATCGGGATCGGGATCCTGCG         ]


>consensus_9706#0 GACGCGGCACAAATACCGCATTTATTGCATCAGCTGCAGCTGTGCGTGGTGACGACGACG CTACGGGGATGAAGGTGGTGTGGTGGTTGCTCTTGTGTCGCGAGAGCTTCGCGCCTGGGG CTGGTAACCTCTTCGCCCGTCTCGACGGCGCTCCCGGCACCTGAATGCTCGGCCGCAGTG CCGTTGGCACATCTCCGGGTTAATCTTATCTTATGCGCATAAAGATGATGTTGATTCACT CACTCATTCATCGGGATCGGGATCCTGCGTGGCGCGTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)