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Oryza sativa
cluster # 9710 cluster # 9710       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9710#0 length = 2357 sequences # 4  
consensus_9710#1 length = 578 sequences # 2  

consensusID : consensus_9710#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2357
fasta sequence
                              [TGGGGGCAGTGGGCGAGTTCTTGCTGCGAGTTCGTCGCGAGAGAGGAAGCAGCAGAGAGAAAGAGAGCAAAAGCAGCGAGAGGTTGTGGGGAGAGAGAGGAGCGAATTGATTAGTGTCGCCACATCGTCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGGTGATCAGAGAGAGAGAGAGAGAGAGAGTGAGTGAAGCGGAGCTCACTTCCTCCCCTCACGGGAGCAGCCAACGCCCAGCGCCGCCACCACCCACGCCGTTCGCGCGCTTTAAAGAAGGCGCGCCACCTTCGCATAAGCTTAAAAGATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCAT--TTCTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCATAGTATCACAAGCATTCGCTGTGCTT]

[+] EMBL AK099640             [TGGGGGCAGTGGGCGAGTTCTTGCTGCGAGTTCGTCGCGAGAGAGGAAGCAGCAGAGAGAAAGAGAGCAAAAGCAGCGAGAGGTTGTGGGGAGAGAGAGGAGCGAATTGATTAGTGTCGCCACATCGTCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGGTGATCAGAGAGAGAGAGAGAGAGAGAGTGAGTGAAGCGGAGCTCACTTCCTCCCCTCACGGGAGCAGCCAACGCCCAGCGCCGCCACCACCCACGCCGTTCGCGCGCTTTAAAGAAGGCGCGCCACCTTCGCATAAGCTTAAAAGATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCAT  TTCTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAG                            ]
[+] EMBL AK062566             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCATTGTTCTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTGCCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCCAACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATCGCCGCGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATCCCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAACGACCTCTCCGGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTCACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGCATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTCCAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAGGTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTGGGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGTGGTGCCGGCGCGGCTGGTGCAGGAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGCATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCATAGTATCACAAGCATTCGCTGTGCTT]
[+] EMBL CB657946             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCTGCACGCGGTGCGGCGGTCGCTCGACCATATGCCTGGCTCGTCGTTCTTCGAACCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCCACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCTAGGGCGGGGTCGCCGGGGCTGTCCGGGCGGCTCGACCATGCGCTGGGGCGGCTGTCCGCGCTCACCGATCTGTCGCTCGTGCCCGGGCGCGTCGAATGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTCTTGGCCGT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB638793             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            GGCGTCGTCGCTCCCCTCCAGCGTCTCGCTNTGCTTCATGTACAACTGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGGCCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGCCATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGATTGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGGATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGTTCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGGTGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTGATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGGTGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCA                          ]


>consensus_9710#0 TGGGGGCAGTGGGCGAGTTCTTGCTGCGAGTTCGTCGCGAGAGAGGAAGCAGCAGAGAGA AAGAGAGCAAAAGCAGCGAGAGGTTGTGGGGAGAGAGAGGAGCGAATTGATTAGTGTCGC CACATCGTCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCA CCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCT AGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGC TTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGC GGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGC ACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGGTGATCAGAGAGAGAGAGAGAGAGA GAGTGAGTGAAGCGGAGCTCACTTCCTCCCCTCACGGGAGCAGCCAACGCCCAGCGCCGC CACCACCCACGCCGTTCGCGCGCTTTAAAGAAGGCGCGCCACCTTCGCATAAGCTTAAAA GATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCATTT CTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTG CTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGAC CCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCG TCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGC GACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTG TCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTG CCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTC TTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCC AACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATC GCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATC CCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAACGACCTCTCC GGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTC ACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGC ATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTC CAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAG GTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTG GGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAG GAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGC ATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAAC TGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGG CCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGC CATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGAT TGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGG ATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGT TCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGG TGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTG ATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGG TGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCATAGTATCAC AAGCATTCGCTGTGCTT



consensusID : consensus_9710#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 578
fasta sequence
                              [TCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAAGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTG]

[+] EMBL CB638792             [TCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAAGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTG]
[+] EMBL CB640861             [TCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTG                                                                                                                                                                                    ]


>consensus_9710#1 TCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCACCGCCGC AAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCTAGCTTCT TAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGCTTCTCGG CAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGCGGCGGTG GTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGCACCGCCT CCAGCTTCTTCGTCCACGAGAAAGCGAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGA GGATGATGGCGGTGCTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGG AGGGGATTCTTGACCCCGTCGACTTCCTGGCGCTGCAAGCGGTGCGGCGGTCGCTCGACG ATATGCCTGGCTCGTCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCC CCGGGGTGTTCTGCGACGGCAACAAGGTGTCGGCGCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9710#0      TGGGGGCAGTGGGCGAGTTCTTGCTGCGAGTTCGTCGCGAGAGAGGAAGCAGCAGAGAGA 60
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      AAGAGAGCAAAAGCAGCGAGAGGTTGTGGGGAGAGAGAGGAGCGAATTGATTAGTGTCGC 120
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CACATCGTCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCA 180
consensus_9710#1      -------TCTCCACCACCACCACCTCCGTCCTTCCTCGCCAAGCCACCATCATTGCGCCA 53
                             *****************************************************

consensus_9710#0      CCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCT 240
consensus_9710#1      CCGCCGCAAGATCTGAGCTCGACTCCTCCTCTCCTCGCCCCCGCACGGGCGCACGACGCT 113
                      ************************************************************

consensus_9710#0      AGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGC 300
consensus_9710#1      AGCTTCTTAAGTATTTTTCTTCTTACCGCGCAGCGCGCGGCGGCTGGCTGGCTAGCTAGC 173
                      ************************************************************

consensus_9710#0      TTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGC 360
consensus_9710#1      TTCTCGGCAAAGGCTTGTTGCGGTTGCGGTTGCAGTACAGGGGCGTGTGTGCGCGCGAGC 233
                      ************************************************************

consensus_9710#0      GGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGC 420
consensus_9710#1      GGCGGTGGTACGGTGCCCGCACCCACCCACCACCACCCCCGCCATTAAAGGCGCTCACGC 293
                      ************************************************************

consensus_9710#0      ACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAGGTGATCAGAGAGAGAGAGAGAGAGA 480
consensus_9710#1      ACCGCCTCCAGCTTCTTCGTCCACGAGAAAGCGAG------------------------- 328
                      ***********************************                         

consensus_9710#0      GAGTGAGTGAAGCGGAGCTCACTTCCTCCCCTCACGGGAGCAGCCAACGCCCAGCGCCGC 540
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CACCACCCACGCCGTTCGCGCGCTTTAAAGAAGGCGCGCCACCTTCGCATAAGCTTAAAA 600
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GATTCCCCACACCACCTCCTCTCACCTCGCGCCACGAGCGTTGATCGGTGCTTTTCATTT 660
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CTTCCTTGCTGCAGAAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTG 720
consensus_9710#1      --------------AAGAGACAGAGAGAGGGAGAGGCAGAGGACGAGGATGATGGCGGTG 374
                                    **********************************************

consensus_9710#0      CTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGAC 780
consensus_9710#1      CTCGCGCGGCTGGGCGTCATTGTGGTGTTGTGGGCGGTGGTGGCGGAGGGGATTCTTGAC 434
                      ************************************************************

consensus_9710#0      CCCGTCGACTTCCTGGCGCTGCAGGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCG 840
consensus_9710#1      CCCGTCGACTTCCTGGCGCTGCAAGCGGTGCGGCGGTCGCTCGACGATATGCCTGGCTCG 494
                      *********************** ************************************

consensus_9710#0      TCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGC 900
consensus_9710#1      TCGTTCTTCGAAGCGTGGGACTTCACGGCCGACCCGTGCGGGTTCCCCGGGGTGTTCTGC 554
                      ************************************************************

consensus_9710#0      GACGGCAACAAGGTGTCGGCGCTGGCGCTCGGCGACCCGAGGGCGGGGTCGCCGGGGCTG 960
consensus_9710#1      GACGGCAACAAGGTGTCGGCGCTG------------------------------------ 578
                      ************************                                    

consensus_9710#0      TCCGGGCGGCTCGACCAGGCGCTGGGGCGGCTGTCCGCGCTCACCGAGCTGTCGCTCGTG 1020
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CCCGGGCGCGTCGAAGGCGAGCTCCCGGAGTCGCTCAGCTCGTGCCGGAACCTCCGATTC 1080
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TTGGCCGTCAGCAAGAACCTCATCTCCGGCCAGATACCGGACGGCCTCGGCGGGCTGTCC 1140
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      AACCTCCGGACGCTCGACGTCAGCTTCAACCAGATCTCCGGCACCATCCCGGCGTCGATC 1200
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GCCACGCTGCCGTCGATCACCAACCTCATCCTCTGCCACAACCATCTCACCGGCGGCATC 1260
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CCGTCGTTCCCGGACTCGTCGCCGCTCATCCGGCTCGACCTCAAGCACAACGACCTCTCC 1320
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GGCGGCGTGCCGAACCTGCCGAGCACGCTCCAGTACCTCTCGCTCTCGGCGAACCGGCTC 1380
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      ACCGGCACCGTCGACTCCGTGCTCCCCCGGCTCACTCGGCTCAACTACCTCGACCTCAGC 1440
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      ATGAACCAGCTCGACGGCCCAATCCCGGCGTCCGTCTTCACATTGCCGCTGTCCGTGCTC 1500
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CAGCTGCAGCGCAACTTCTTCTCCGGCCTCCTCCAGCCGGCGAACGACGTGACGATCCAG 1560
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GTGGTGGACCTGAGCTACAACCGCTTCTGGGGCCCCGTGTCGCCGCTCCTCGCCGGCGTG 1620
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GGGCAGCTGTACCTGAATAACAACCGGTTCACCGGCGAGGTGCCGGCGCGGCTGGTGCAG 1680
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      GAGCTGGTCGGCTCCGGCGGGCTCCAGGTGCTGTACCTGCAGCACAACTTCCTCACCGGC 1740
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      ATCGAGATTTCGCCGGCGTCGTCGCTCCCCTCCAGCGTCTCGCTCTGCCTCATGTACAAC 1800
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TGCATGGTGCCGCCGGTGTACGCGCCGTGCCCGCTCAAGGCCGGCTCGACGAACACCCGG 1860
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CCGGCCGACCAGTGCCCGGAGTGGAGGGGCTAATCAAAGCTGGCAACACAACGCCGACGC 1920
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      CATTGCCGGATCGCCTCGGATCGTCCAAGCTCAAGAAAACCGGAAAAGAATGGAGGAGAT 1980
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TGCAAATGGCGGTCTCCGATTCTTTGATTAATTTGTCCAGTTACTAGCGTTCCAATGTGG 2040
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      ATTACTATTCTTTTTGGTTGGGGGGAGATGGATGGAGATAGTCACAGACAAGAAGTAAGT 2100
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TCCTTAATAATCTTGGGTTTATAGGCGTAATTTCTTTCTCCTTTTTTTGTGTTTAGGTGG 2160
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TGTATGTTCTTTTGTGTCCCCTGCTGTATAGTTGCGTGAGTAGTAAAACATTGGCTCTTG 2220
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      ATGTTATGTGAGGTGGCGACGATCGATTGATGTATCTGATGATGATCATGATGATGGTGG 2280
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      TGTTAGAAATCTGTGATGTTATTTATATATCGCATTGCCATTGGGCAAGCATAGTATCAC 2340
consensus_9710#1      ------------------------------------------------------------
                                                                                  

consensus_9710#0      AAGCATTCGCTGTGCTT 2357
consensus_9710#1      -----------------
                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)