cluster # 9715

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Oryza sativa
cluster # 9715 cluster # 9715 Sequences # 6 consensus # 1

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9715#0 length = 503 sequences # 6

consensusID : consensus_9715#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 503
fasta sequence

                              [GACCCACGCTCCGTTGGTACTTGCACTAGATGAAGTATAAAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCA-GGTTAAGTGAAGTCCTTATAGGCAAATCA-AATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACA-TGGATGATTATAA-AAAAACTATTAATACCACCTTAAAATAAAATTAT-GTATTACAAACT-AAAATTTGAAACCATAATAAACATTT-ACTTTTGTCATGTATTATTATTAGATTCAGTT-GCAATGAATGGTTATTTTT-TCCGGTACTTGATATTGATAAA-AAAAAATTCACTAGCAAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGC-AAATCATTTAACTCTACAAAATCAGAAGGAAATCGTGC-ATGAATGGAAAAA]

[+] EMBL BI798653             [GACCCACGCTCCGTTGGTACTTTCAGTAGATGAAGTAT AAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCACGGTTAAGTGAAGTCCTTATAGCCAAATCA AATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACA TGGATGATTATAA AAAAACTATTAATACCACCTTAAAATAAAATTAT GTATTACAAACT AAAATTTGAAACCATAATAAACATTT ACTTTTGTCATGTATTATTATTAGATTCAGTT  C ATGAATGGTTATTTTT TCCGGTACTTGATATTGATAAA AAAAAATTCACTAGCAAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGCAAAATCATTTAACTCTACAAAATCAGAAGGAAATCGTGC ATGAAAAAAAAAA]
[+] EMBL BI804601             [                    TTGCACTAGATGAAGTATAAAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCA GGTTAAGTGAAGTCCTTATAGGCAAATCA AATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACA TGGATGATTATAA AAAAACTATTAATACCACCTTAAAATAAAATTAT GTATTACAAACT AAAATTTGAAACCATAATAAACATTT ACTTTTGTCATGTATTATTATTAGATTCAGTT GCAATGAATGGTTATTTTT TCCGGTACTTGATATTGATAAACAAAAAATTCACTAGCAAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCCAGTTCACTACACTCCATCGCAAAATCATTTAACTCTACAAAATCAGAAGGAAATCGTGC ATGAATGGAAAga]
[+] EMBL BI804366             [                    TTGCACTAGATGAAGTATAAAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCA GGTTAAGTGAAGTCCTTATAGGCAAATCACAATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACA TGGATGATTATAACAACAACTATTAATACCACCTTAAAATAAAATTAT GTATTACAAACT AAAATTTGAAACCATAATAAACATTT ACTTTTGTCATGTATTATTATTAGATTCAGTT GC ATGAATGGTTATTTTT TCCGGTACTTGATATTGATAAC AAAAAATTCACTAGC AAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGC AAATCATTTAACTCTACAAAATCAGAAGGAAATCGTGCAATGAATGGAAAga]
[+] EMBL BI803313             [                    TTGCACTAGATGAAGTATAAAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCA GGTTAAGTGAAGTCCTTATAGGCAAATCA AATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACACTGGATGATTATAA AAAAACTATTAATACCACCTTAAAATAAAATTAT GTATTACAAACT AAAATTTGAAACCATAATAAACATTT ACTTTTGTCATGTATTATTATTAGATTCAGTT GCAATGAATGGTTATTTTT TCCGGTACTTGATATTGATAAA AAAAAATTCACTAGCCAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGC AAATCATTTAACTCTACACAATCAGAAGGAAATCGTGC ATGAATGGAAAAA]
[+] EMBL BI798328             [                    TTGCACTAGATGAAGTAT AAAAAAAAAGTTATGTGTGGAAGCGTAAGATTACCA GGTTAAGTGAAGTCCTTATAGGCAAATCA AATATTTCCAGTGCCAGAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACATAATTATTTGTTGCTCTAAATCCACTGACA TGGATGATTATAA AAAAACTATTAATACCACCTTAAAATAAAATTAT GTATTACAAACT AAAATTTGAAACCATAATAAACATTT ACTTTTGTCATGTATTATTATTAGATTCAGTT GCAATGAATGGTTATTTTT TCCGGTACTTGATATTGATAAA AAAAAATTCACTAGCCAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGC AAATCATTTAACTCTACAAAATCAGAAGGAAATCGTGC ATGAATGGAAAga]
[+] EMBL BI803297             [                                                                                                                                                                                                                                             AATACCACCTTAAAATAAAATTATGGTATTAC AACTGAAAATTTGAAACCATAATAAACATTTGACTTTTGTCATGTATTATTATTAGATTCAGTTCGCAATGCATGGTTATTTTTGTCCGGTACTTGATATTGATAAA AAAAAATTCACTAGC AAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTAGCTATCATATCAAGTTCACTACACTCCATCGC AAATCATTTAACTCTACAACATCAGAAGGAAATCGTGC ATGAATGGAAAAA]




>consensus_9715#0
GACCCACGCTCCGTTGGTACTTGCACTAGATGAAGTATAAAAAAAAAAGTTATGTGTGGA
AGCGTAAGATTACCAGGTTAAGTGAAGTCCTTATAGGCAAATCAAATATTTCCAGTGCCA
GAAAGACACTCACATGGGTGTCCTTTTTCTTAAAAAAAGAGGAAAGACACTCACATGACA
TAATTATTTGTTGCTCTAAATCCACTGACATGGATGATTATAAAAAAACTATTAATACCA
CCTTAAAATAAAATTATGTATTACAAACTAAAATTTGAAACCATAATAAACATTTACTTT
TGTCATGTATTATTATTAGATTCAGTTGCAATGAATGGTTATTTTTTCCGGTACTTGATA
TTGATAAAAAAAAATTCACTAGCAAAGAAGAGCCATAGTAGAAGAAATGTTTTTTGGCTA
GCTATCATATCAAGTTCACTACACTCCATCGCAAATCATTTAACTCTACAAAATCAGAAG
GAAATCGTGCATGAATGGAAAAA

clustalw multiple alignements is not computed in this case