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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9746#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 3232 fasta sequence
[CTCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACAAGAGCTGCCCTGTAAGATAAACACTGATGACCTGGTTTCTATCTCTGGCTACTTGTTGGAAGAAATATACTCTACAGCCTGCACCTGGTCATGTGATATCAGCACTAGAGTCATTTATATACAAAACTAGAGCGTAATAATTCCATCAGTTTGTGTGATATCATTTTGTTGTACTGTTTTATCGCCCATATATTATCCTTTTCTTATAGTACTTTGGCTGCCAAAGTTTCATGAACAATGTGACATCTTTGCTAATCATATTTTTGCTACTGTACAAATTAGCTGTTCCCAGAGAGATTTTCTCCAACCGACTACTTGCAGAGGATGACGCATCCTATTTTCATTGCACACCTTTTCAGTTGGTAATCAGACATTTTATGGTCGCTGGAATGCTTATCTTGCTACAGGAGATTTCTTGAGGGATATCATGTGGTTTCAGTCAGATGCATGTTATCTTAATGTGCTAAAGCACCTAGCAGCTTTTGCAACTAATTGTAACAAATTTGCTGAATACACAGCGGCAAGGTCTCCTCTTGGGCTTTATTCTTGCCTGCCATTCCAAGTATGATCACAGAAATATAAAATTTGAAGTCAATACCAATAATATCTGGACAAGTGGAATTAGGTTTGTTCGACAATATTGGAATTTGGAAGATCTTTCTTCGTGATAATCTCAGTATGATGTCAAAAATTGGATATTCCATCCATTATTCACTTCTCATGACTGACACGTTACAAGGTGCTGGATTTATTTTTTAAGTGGTGCATCATACACGTGATATGTGATCATATATTGGTCTCCCTCATGCATTAGTCTCATTGGATCTGCTCTTTTATGCCCCCCTGGGGTTATGTTGGTGCCTCTGCTACTTACTGATAATTGAATAATCATATGGCTCAAGGTTGTGGTAAGCTTAATGGGTTTGTGTGCTGCCTCATATGTGTATAGCTCCTCTATCTTTTGTGGCATATTGCTTCTTTGTACATATATGTATGTAAAAACTACCATACTGAATTGTAGGGAGACGAGACCATAGACCTGATGACTTTAGAGGTAGGCATCTGAGACCCCATAGGAGGAATTCCCCTGAAAGAGATGCCAGGGATCATTTGTTCCGTGATCACAGACCGCGCTCTCGAGATAGAGGCTCTAGTCATTCAAGATCTCCCATCAGGAAGAGGCATAGAAAGAAGCTTGAGGGTGGAAAAACTAATTCATCAGAAAGTTTGAACTCCTCTGATAACGAAGATAGAAAAAAGGATGATAGATTCAACAAAGCTGATGATAAACATGATAATGAAGCACAGCTGCAACGCATTCAACTGGATATGGAAGCATTACATGAGGAGAAATCTTCACTGGAGGTGATACTGAATGGCAAGATCAATGAAGCATCCAAACTTTCTAGCAGAATAGCTGATCTTGAATCACAATTGAACGATGAAAAAGAAGCTTGCGAAAGGATGGCCTCAAAAACAAAGAAACTCATCAAAGCACATGCACGCTATGTGAAAGCTCAGGATGATTTAAAGAGGTCGCAAGCTCGTTTTGAGAGGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA-CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT-CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTCGGCAAAAAAAAAA]
[+] EMBL AK064816 [CTCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACAAGAGCTGCCCTGTAAGATAAACACTGATGACCTGGTTTCTATCTCTGGCTACTTGTTGGAAGAAATATACTCTACAGCCTGCACCTGGTCATGTGATATCAGCACTAGAGTCATTTATATACAAAACTAGAGCGTAATAATTCCATCAGTTTGTGTGATATCATTTTGTTGTACTGTTTTATCGCCCATATATTATCCTTTTCTTATAGTACTTTGGCTGCCAAAGTTTCATGAACAATGTGACATCTTTGCTAATCATATTTTTGCTACTGTACAAATTAGCTGTTCCCAGAGAGATTTTCTCCAACCGACTACTTGCAGAGGATGACGCATCCTATTTTCATTGCACACCTTTTCAGTTGGTAATCAGACATTTTATGGTCGCTGGAATGCTTATCTTGCTACAGGAGATTTCTTGAGGGATATCATGTGGTTTCAGTCAGATGCATGTTATCTTAATGTGCTAAAGCACCTAGCAGCTTTTGCAACTAATTGTAACAAATTTGCTGAATACACAGCGGCAAGGTCTCCTCTTGGGCTTTATTCTTGCCTGCCATTCCAAGTATGATCACAGAAATATAAAATTTGAAGTCAATACCAATAATATCTGGACAAGTGGAATTAGGTTTGTTCGACAATATTGGAATTTGGAAGATCTTTCTTCGTGATAATCTCAGTATGATGTCAAAAATTGGATATTCCATCCATTATTCACTTCTCATGACTGACACGTTACAAGGTGCTGGATTTATTTTTTAAGTGGTGCATCATACACGTGATATGTGATCATATATTGGTCTCCCTCATGCATTAGTCTCATTGGATCTGCTCTTTTATGCCCCCCTGGGGTTATGTTGGTGCCTCTGCTACTTACTGATAATTGAATAATCATATGGCTCAAGGTTGTGGTAAGCTTAATGGGTTTGTGTGCTGCCTCATATGTGTATAGCTCCTCTATCTTTTGTGGCATATTGCTTCTTTGTACATATATGTATGTAAAAACTACCATACTGAATTGTAGGGAGACGAGACCATAGACCTGATGACTTTAGAGGTAGGCATCTGAGACCCCATAGGAGGAATTCCCCTGAAAGAGATGCCAGGGATCATTTGTTCCGTGATCACAGACCGCGCTCTCGAGATAGAGGCTCTAGTCATTCAAGATCTCCCATCAGGAAGAGGCATAGAAAGAAGCTTGAGGGTGGAAAAACTAATTCATCAGAAAGTTTGAACTCCTCTGATAACGAAGATAGAAAAAAGGATGATAGATTCAACAAAGCTGATGATAAACATGATAATGAAGCACAGCTGCAACGCATTCAACTGGATATGGAAGCATTACATGAGGAGAAATCTTCACTGGAGGTGATACTGAATGGCAAGATCAATGAAGCATCCAAACTTTCTAGCAGAATAGCTGATCTTGAATCACAATTGAACGATGAAAAAGAAGCTTGCGAAAGGATGGCCTCAAAAACAAAGAAACTCATCAAAGCACATGCACGCTATGTGAAAGCTCAGGATGATTTAAAGAGGTCGCAAGCTCGTTTTGAGAGGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTTGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATC ]
[+] EMBL CB663456 [ TCTTCTCGTCTCCCCACTGGCCGCCGCCACGTCTCGTCTCCTCCTCCTCCTCGCCGCCGCCGCCGCCGCCGCGGGAGAAGGGTTGGGTTGGTGAAAGAGAGATGAGGGAGATGATGGGTCCTCCCCGCCGCGGCCCGGCGTACAAGACGAAGCTGTGCGCGCTGTGGAGGCAAGGCGAGTGCAACCGCGCCTCCTGCAGCTTCGCCCACGGCGACGCCGAGCTCCGTGGCCCGCCGCCTCGTTCCCCGTTCCCGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCACACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCA ]
[+] EMBL CF306696 [ CGCCTCGCGGTGGACCTGGTATGCGCGCACCCCCTCTCCCTCCTCCCCTTCCCCGTCTCGCTCTCCCCTTCCCATCTGCTTTTCTGCTTCTCGGCGGTTGCCGTGTGCTCTCGATCCGCAGCTAGGTGGCTCTAAATCTGTTCTTCTGCAATGGAATTACTGTCTCCGCCGATGTTCTATTGTGGACAGATTGTGCCGATTGTTTTCTAGGAAATTATTCAGACGGAGTGAAACTGGGTTGAGTGTGATCTGCTATCAGTTTGAAAAGTTTGGGGGATATTCATATTTTGAGAAGATTCATGGTGTCCTACCATGGCCCCAAGAAAGAGCATTCTTTTTAAAATAGGAGTATACATCGTTTCATCTGTTTATGTTGGATTTCGTTTATAAATCCTGAGAGGATGGGCTGCATATGTGGGGAATATGACAGACAGTGCGGGATGCTGGTTGTACAGCGAAGTGAAAGAGATATCAATTCCATCTGCGCTGTGTGCTTTCTGCAGAAACTTTTGGAAATGTTGTGGAACTGAGCTAGTAGTAAGAGAAAATGATTAGAAGAATACCAACCATGGTAACATCTGACA ]
[-] EMBL CB663457 [ GGTTCGCTGATTTGCTTGCTTCAGATACCTTGAAGCCGTGTAGCAAGGATCAGGGTTCTAGTGCTGCTAAGGAAGATCCATATAATGCTTATGAAATGAGTCCAAGTGATCAACGGCAGAATCATGAAACAACTAGAAAAAGATCCGTTGCCCTCTCAACTAGCGAAGAAGGAAGGAATGGGAAGAAAAGGAGAGAGAGTTATGACAACAGGGATCCTATGTCAGAGAAATATAGACCAGAAGATGCTCTAGAACCTTTTCAGAGCAGCAAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGATGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTCGGCA ]
[+] EMBL CA766267 [ acgaGACAACAGGGATCCTATGTCAGAGAAATATAGACCNGAAGATGCTCTAGAACCTTTTCAGAGCAGCGAGGGAACTGAGGCAAAAGAACTATTATCTGTGAAGAAGAATTTGGGGGATGGTGACAACAATGAGAAAGGAAATGTTGTTTCTTCTGCAAATGTTTTTACAGATAGGTATGAGGGCGGTGATGATGACGATGTTCTTGTGGACTAGTAAATTCATGCAGATGGAGATTGACAAAGATTTCAGCAGTAAGGAGTAGGGTGAAGTATGGAACATGCGTTCATTGCCATGCCAGTTGCGTTTTCACAGACTAACCTGAAACTAAGGCTGCCAGCCTGTTATTTATCTTAATGTATCATTTAATACA CCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGTGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCT CACATTTGGGCAAACTGTGCGTCGTTATTACCATGGATTTCAAGTAGCCTGTATGGATAATGTATCTGGCAGCCTATTCGAGTTAGGTTTGGTATTCATGGATTCATCATTGTGTTGTAAATTTGTAATGCTGCGATCTTTAGCGTCTGTGTTACTA ]
[+] EMBL BI807083 [ tcaatgTTAANACACCCGGGCATTAGGAATTAAGCATCTCGATAACTTCTGTGGCGAAGACGAGTTGCATTGTTCTCAAACAGGTTATTCTGCACATTTGGGCAAACTGTGCGTCGTTANTACCATGGATTCCAAGTAGCCTGTATGGATAATGTATCT GCAGCCTATTCGAGTTA GTTT GTATTCATGGATTCATCATTGTGTTGTAAATTTGTAAT CTGCGATCTTTAGCGTCTGTGTTACTACAGCATCCCATGGTTTCACTC GCAAAAAAAAAA]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||