These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9758#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1184 fasta sequence [GCAGACACCACTGATTTACCAGCAACCGTCAGTCAAGGGATTGAATGAGCTCAAGGACTCAACAGTCCAAATGGCTTCAAGCATGGGCAACATCGATGCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAGAAATCGATGACCTGCTGCCTATCGAGGTCAAGGAGCAGAGGTTGAGCAACTTGCTCCAGGCCACAATGGTTGGGGGTTGTGTTGCTGCTATGCCATTGCTCAAGAAGATCCCGACTTCTGTCCTCTGGGGCTACTTCGCCTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTCTGGGAGAGGATCTTGCTGCTCTTCACTGCTCCCAGCAGAAGATACAAGGTGTTAGAAGAGTACCACACCACGTTTGTCGAGACCGTGCCATTCAAGACGATAGCCATGTTCACACTCTTCCAGACNATGTATCTACTCGTCTGCTTCGGGATCACATGGATCCCGATTGCTGGGGTTCTTTTCCCCCTCATGATCATGCTGCTGGTTCCAGTCAGGCAGTACATCCTCCCAAAGCTCTTCAAAGGTGCACATCTGACTGATCTGGATGCAGCAGAGTATGAGGAGTCACCAGCTATACCGTTCATTGCCGCGCAAGATATTGATGTTGCATTGGCGCGCACCCAGAGTGCAGAAATCCTTGATGACATTGTCACTAGAAGCCGTGGTG-AAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCTCCGGTGGCACACCAGTGGCAGAACTTAAAGGAATCCGCAGCCCTTGTATCTCTGAGAGGGCATACAGCCCTTGTATCACCGAGTTGAGGCATGACC-CAGCCCTCTAGGAGGAAGAGGC-AGCCCAAGGACCGGTGAGACCCGATCGTCCAAGTTGGGCGAAGGATC-AACACCAAAGTGAAGCAAGAATGATGCACTGCTCATATGAGCTATGCAACTACCTG-----AAAT--C-AGC--TA---TACTAATGATTTCTGTATAACTATGGCGTACGGTTATATGATGTCTTATGATCAAGTATCAAGTATGAGTCTATGAGAATGTTTATGTATATCTCTAGCCTAGTATATCACCCCTTCCTCTTTTTTTGGTGTATTTCCTGATTTGGAGCACCATATGTGTAATCTCTGAACTACC-AGAATATTAGAGTGACTACTTGGTAACCTTTTGAGTTTCAAAAA] [+] EMBL CA756221 [GCAGACACCACTGATTTACCAGCAACCGTCAGTCAAGGGATTGAATGAGCTCAAGGACTCAACAGTCCAAATGGCTTCAAGCATGGGCAACATCGATGCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAGAAATCGATGACCTGCTGCCTATCGAGGTCAAGGAGCAGAGGTTGAGCAACTTGCTCCAGGCCACAATGGTTGGGGGTTGTGTTGCTGCTATGCCATTGCTCAAGAAGATCCCGACTTCTGTCCTCTGGGGCTACTTCGCCTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTCTGGGAGAGGATCTTGCTGCTCTTCACTGCTCCCAGCAGAAGATACAAGGTGTTAGAAGAGTACCACACCACGTTTGTCGAGACCGTGCCATTCAAGACGATAGCCATGTTCACACTCTTCCAGACNATGTATCTACTCGTCTGCTTCGGGATCACATGGATCCCGATTGCTGGGGTTCTTTTCCC ] [+] EMBL AK060451 [ CAGTCAAGGGATTGAATGAGCTCAAGGACTCAACAGTCCAAATGGCTTCAAGCATGGGCAACATCGATGCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAGAAATCGATGACCTGCTGCCTATCGAGGTCAAGGAGCAGAGGTTGAGCAACTTGCTCCAGGCCACAATGGTTGGGGGTTGTGTTGCTGCTATGCCATTGCTCAAGAAGATCCCGACTTCTGTCCTCTGGGGCTACTTCGCCTTCATGGCCATTGAGAGCTTGCCTGGTAACCAGTTCTGGGAGAGGATCTTGCTGCTCTTCACTGCTCCCAGCAGAAGATACAAGGTGTTAGAAGAGTACCACACCACGTTTGTCGAGACCGTGCCATTCAAGACGATAGCCATGTTCACACTCTTCCAGACAATGTATCTACTCGTCTGCTTCGGGATCACATGGATCCCGATTGCTGGGGTTCTTTTCCCCCTCATGATCATGCTGCTGGTTCCAGTCAGGCAGTACATCCTCCCAAAGCTCTTCAAAGGTGCACATCTGACTGATCTGGATGCAGCAGAGTATGAGGAGTCACCAGCTATACCGTTCATTGCCGCGCAAGATATTGATGTTGCATTGGCGCGCACCCAGAGTGCAGAAATCCTTGATGACATTGTCACTAGAAGCCGTGGTG AAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCTCCGGTGGCACACCAGTGGCAGAACTTAAAGGGATCCGCAGCCCTTGTATCTCTGAGAGGGCATACAGCCCTTGTATCACCGAGTTGAGGCATGACCGCAGCCCTCTAGGAGGAAGAGGC AGCCCAAGGACCGGTGAGACCCGATCGTCCAAGTTGGGCGAAGGATC AACACCAAAGTGAAGCAAGAATGATGCACTGCTCATATGAGCTATGCAACTACCTG AAAT C AGC TA TACTAATGATTTCTGTATAACTATGGCGTACGGTTATATGATGTCTTATGATCAAGTATCAAGTATGAGTCTATGAGAATGTTTATGTATATCTCTAGCCTAGTATATCACCCCTTCCTCTTTTTTTGGTGTATTTCCTGATTTGGAGCACCATATGTGTAATCTCTGAACTACC AGAATATTAGAGTG ] [+] EMBL CA999669 [ CTTCAAGCATGGGCAACATCGATGCGCCAGTTGATGAGACAGTCTTTGACATCGAGAAAGAAATCGATGACCTGCTGCCTATCGAGGTCAAGGAGCACAGGTTGAGCAACTTGCTCCAGGCCACAA ] [+] EMBL CA999571 [ TTC AAGGTGCACATCTGACTGATCTGGATGCAACACAGTATGAGGAGTCACCAGCTATACCGGTCATTGCCGCGCAAGATATTGATGTTGCATTGGCGCGCACCCAGAGTGCAGAAATCCTTGATGACATTGTCACTAGAAGGCGTGGTG AAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCTCCGGTGGCACACCAGTGGCAGAACTTAAAGGAATCCGCAGCCC ] [+] EMBL BI811423 [ CCGTGGTGAAAATCAAGCGCCTGAACAGTCCTAAGATCACCAGCTCCGGTGGCACACCAGTGGCAGAACTTAAAGGAATCC CAGCCCTTGTATCTCTGAGAGGGCATACAGCCCTTGTATCACCGAGTTGAGGCATGACC CAGCCCTCTAGGAGGAAGAGGCTAGCCCAAGGACCGGTGAGACCCGATCGTCCAAGTTGGGCGAAGGATC AACACCAAAGTGAAGCAAGAATGATGC CTGCTCATATGAGCTATGCAACTACCTGGGAAAAAATTCCAAGCCTTAATTTACTAATGATTTCTGTATAACTATGGCGTACGGTTATATGATGTCTTATGATCAAGTATCAAGTATGAGTCTATGAGAATGTTTATGTATATCTCTAGCCTAGTATATCACCCCTTCCTC TTTTTGGGTGTATTTC ] [+] EMBL BM418953 [ CACCCCTTGTATCTCTGAGAGGCCATACAGCCCTTGTATCACCGAGTTGAGCCATGACC CAGCCCTCTAGGAGGAAGA GC AGCCCAAGGACCGGTGAGACCCGATCGTCCAAGTTGGGCGAAGGATCAAACACCAAAGTGAACCAAGAATGAT CACTGCTCATATGA CTAT CAACTACCTG AAAT C AGC TA TACTAATGATTTCTGTATAACTATGGCGTACGGTTATATGATGTCTTATGATCAAGTATCAAGTATGAGTCTATGAGAAT TTTATGTATATCTCTACCCTAGTATATCACCCC TCCTCTTTTTTTGGTGTATTTCCTGATTTGGACCACCATATGTGTAATCTCTGAACTACCAAGAATATTAGAGTGACTACTTGGTAACCTTTTGAGTTTCAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||