These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9776#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2655 fasta sequence [GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG] [+] EMBL AK100099 [GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTCCGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGGCGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGCCTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG] [+] EMBL CB632083 [ CGCCTCCTCCTCCTCCTCCTCCAAAGGCTCGACAAGTCTTGAGGAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCGTCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGGCAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGATGCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTAAACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTATGCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATGGCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGCATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCANATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAA ] consensusID : consensus_9776#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2041 fasta sequence [TTCCTCGAGCACTGTTGGCCTACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAA-TGTTTATGTATATATACA-TCTAATTCGCGAATGCAAGGGAGCAATGTCATTT-ACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT] [+] EMBL AK105000 [TTCCTCGAGCACTGTTGGCCTACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATTTGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTCACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCACGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAGGTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTATTTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCAACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAGATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGATGTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCACTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTTGAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAGGGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAGGGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTTGAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGGGAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAATGCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGGGAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACAAAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAAGAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGACAAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATATCAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCATCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAA TGTTTATGTATATATACA TCTAATTCGCGAATGCAAGGGAGCAATGTCATTT ACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACAT] [+] EMBL OS38035 [ CTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATTGTTTATGTATATATACACTCTAATTCGCGAATACAAGGGAGCAATGTCATTTCACAGAGATGTGAATGGTATATGT ATCTGTACACAG GTGGGTAT ] consensusID : consensus_9776#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 823 fasta sequence [GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATATCAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAGTA] [-] EMBL CB632084 [GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGATATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAGGAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAAGCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGCGGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATGGCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCTTCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATATCAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGATAATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAAGGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTGTCAGTTATGGTGTTTCTCCCCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCAGAGTAGCAATGTTTATGTATATATACATCTAATTCGCGAATGCAAGGGAGCAATGTCATTTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAGTA] consensusID : consensus_9776#3 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 239 fasta sequence [GATGTGGTTTTAGAATTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCGAGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCATTTACAGAGAATGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTAAAAAAAAAAAAAAAAAAA] [+] EMBL BI813093 [GATGTGGTTTTAGAATTCGGATCGTATTGGTAGGATTTACTATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCGAGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCATTTACAGAGAATGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAGTAAAAAAAAAAAAAAAAAAA] consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment consensus_9776#0 GCGAAAAATTCCGCCGCCGCCGTTTCGTCGACCTCATCGGCGGCCATGCTGCTCCGCCTC 60 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CGTCCGCCGCCGCAGCCGGCCGCCAGCCTCGCATCCTTACTCCCCTTCTCCCCCTTCAGG 120 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CGCTTCCTCCACTCGCCGTCCTGGCGCCCTCCTCCTCCTCCTCCTCCGCGCCGCCACCGC 180 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CTCCTCTCCACTGCCGTCGCCTCCTCCTCCTCCTCCTCCAAAGTCTCGACAAGTCTTGAG 240 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAGCGATACGATGTGATTGTGGTTGGAGGAGGCCATGCCGGATGTGAGGCCGCGCTTGCG 300 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 TCGGCTCGTCTTGGTGCGCGCACCCTCCTCCTTACGCTTAACATTGATCGGATTGCGTGG 360 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CAGCCTTGCAACCCTGCCGTGGGAGGGCCTGCAAAGTCTCAACTTGTTCATGAGGTAGAT 420 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCCCTTGGTGGTGAAATGGGGAAAATTGCAGACAGGTGCTACCTACAAAAGCGTGTGCTA 480 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 AACAGCTCAAAAGGCCCTGCTGTACGTGCACTGCGTGCTCAGACTGACAAGAGGGAGTAT 540 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCAGTAGAGATGAAGAAAGTTGTTGAAAGCACACAAAATCTTTTCATTAGAGAGGCAATG 600 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ------------------------------------------------------------ consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCTACAGAGGTTATGATAGGCCAGAACGACAATGTTGAGGGTGTCCGCACTTTCTTCGGC 660 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ----------------------------------------TTCCTCGAGCACTGTTGGCC 20 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 ATGGACTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATT 720 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 TACTGGTTTTATGCACCATCTGTTGTACTTACCACTGGAACATTCATGAGTGGTAAGATT 80 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 TGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTC 780 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 TGGGTAGGTAGGACTTCAATGCCTGCCGGGCGAGCTGGAGAGTCAGCTTCACATGGACTC 140 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 ACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCA 840 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ACTGAAAACTTGCAGCAGTTGGGTTTTGAAACTGACCGCTTAAAAACTGGCACACCACCA 200 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAG 900 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 CGAATTGATCGCAGGACTGTTAACTTTTCTGGATTGGAACCCCAGCATGGTGATGAAGAG 260 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTAT 960 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GTTGGCTGGTTTAGTTTTGATCCTGAATTCCATATTGAGAGGGACCAAATGTGCTGCTAT 320 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 TTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCA 1020 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 TTAACAAGGACTACAAAAGAGACACATCAAATTGTTAGAGATAACTTGGATGAAACACCA 380 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 ACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAG 1080 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ACTTATGGTGGTTGGGTAGAAGCAAAGGGACCAAGATACTGTCCAGCAATTGAAGACAAG 440 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 ATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGAT 1140 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 ATTGTAAGGTTCAAAGACAAAGAGTCCCATCAGGTATTTCTTGAACCAGAGGGCAGAGAT 500 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCA 1200 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GTTCCTGAGCTTTATCTGCAGGGGTTTTCCACTGGGCTTCCTGAGCGATTGCAATTATCA 560 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CTTGTGAGAACACTACCAGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTT 1260 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 CTTGTGAGAACACTACCGGGACTGGAGAATTGTGTGATGCTAAGGCCGGCTTATGCTGTT 620 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTCATGACCAAGAAGTTTGAG 1320 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GAATATGATTACTTGCCAGCTTACCAGTGCTCAAGATCACTTATGACCAAGAAGTTTGAG 680 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAG 1380 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GGCTTATTCTTCTCTGGCCAGATTAACGGAACAACAGGATATGAAGAAGCTGCAGCTCAG 740 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTT 1440 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GGTATAATTTCCGGAATAAATGCAGCTAGGCATTCTGATGGAAAGCCACTTATCATTCTT 800 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGG 1500 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GAGAGAGAAAGCAGTTATATTGGGACTCTGATTGATGATCTTGTCACAAAAGATCTTAGG 860 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAAT 1560 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GAGCCTTATCGCATGTTAACAAGCCGTTCAGAACACCGTCTATTGCTTCGAGCTGATAAT 920 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGG 1620 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GCTGATAGTCGGTTGACTCCTTTGGGACGAGATATTGGTTTGATAGATGATAGACGATGG 980 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACA 1680 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GAGCTTTATCAATCAAAGCAAGCCCGGATTAAAGAGGAAAAAGAACGATTGAAATCTACA 1040 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 AAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAA 1740 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 AAAATCCCAGGAGGTGAATTTGCTGCTGCGGTTACCTCTGTATCCAACCAACCTGTAAAA 1100 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGAC 1800 consensus_9776#2 ------------------------------------------------------------ consensus_9776#1 GAATCATCTACACTTGAAGCCATACTGAAGAAGCCACATGTACAGTATAAACTTCTTGAC 1160 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 AAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 1860 consensus_9776#2 -------------GAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 47 consensus_9776#1 AAACATGGATATGGAAATGAACATTTGTCTCGAATTGAGAAAGAATGTGTGGAGATTGAT 1220 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 1920 consensus_9776#2 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 107 consensus_9776#1 ATTAAGTACGAAGGTTTTATAGCACGGCAGCAAAGTCAATTGCAGCAGATTGTAAATCAG 1280 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 1980 consensus_9776#2 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 167 consensus_9776#1 GAGCACAAGAAGCTTCCTGAAGACTTAGATTATCATTCAATGACAAACCTGTCACTTGAA 1340 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 2040 consensus_9776#2 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 227 consensus_9776#1 GCTCGTGAGAAACTTTCAAAGGTAAGGCCACAAACAATAGGCCAGGCTAGCAGAATTGGC 1400 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATG 2100 consensus_9776#2 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGGGCAACCGTCGCATG 287 consensus_9776#1 GGGGTGAGCCCAGCTGATATGACTGTTCTTCTCATTTGGATGGAGAGCAACCGTCGCATG 1460 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 2160 consensus_9776#2 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 347 consensus_9776#1 GCTAACTACAAGAGACAGCAAAGCACGTTGAGATCTGCTGCGACCAAGGCAGATGATTCT 1520 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 TCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATAT 2220 consensus_9776#2 TCAGACGAAGTGGTTCATGCCAGTGCCACGAATGCATAATTGAGCGCCCCCCGACTATAT 407 consensus_9776#1 TCAGACGAAGTGGTTCATGCCAGTGCCACCAATGCATAATTGAGCGCCCCCCGACTATAT 1580 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 2280 consensus_9776#2 CAGCCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 467 consensus_9776#1 CAACCAACTGAATTGGACCACTGGACTTTTCTGAGCCAAAAATGTGTACTCTCTGAAGAT 1640 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCA----------------TCAA 2324 consensus_9776#2 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCAAATTGATGTGGATACCTCAA 527 consensus_9776#1 AATTTCCAGACGCCTGTGGAAGAGTTATACAGGACATGCA----------------TCAA 1684 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCC 2384 consensus_9776#2 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCT--GTCAGTTATGGTGTTTCTCC 585 consensus_9776#1 GGCACCTTTTGCTACTTGAAGGAAGTTGGTGGTGGCCTCTGTCAGTTATGGTGTTTCTCC 1744 consensus_9776#3 ------------------------------------------------------------ consensus_9776#0 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 2444 consensus_9776#2 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 645 consensus_9776#1 CCTACGACGCTGAATTGCTGATGTGGTTTTAGAATGTCGGATCGTATTGGTAGGATTTAC 1804 consensus_9776#3 -------------------GATGTGGTTTTAGAAT-TCGGATCGTATTGGTAGGATTTAC 40 **************** ************************ consensus_9776#0 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 2502 consensus_9776#2 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 703 consensus_9776#1 TATATCTTTATAGTGG-ATAAGAATGTAAAGAGCGACAAAAATGAAAGTGGTAGAGCA-G 1862 consensus_9776#3 TATATCTTTATAGTGGGATAAGAATGTTAAGAGCGACCAAAATGAAAGTGGTAGAGCCCG 100 **************** ********** ********* ******************* * consensus_9776#0 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 2560 consensus_9776#2 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 761 consensus_9776#1 AGTAGCAATGTTTA-TGTATATATACATCTAATTCGCGAATGCA-AGGGAGCAATGTCAT 1920 consensus_9776#3 AGTACCCATGTTCCCTGTATATATACATCTAATTCGCGAATGCCTAGGGAGCCATGTCAT 160 **** * ***** **************************** ******* ******* consensus_9776#0 TTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 2620 consensus_9776#2 TTACAGAGAAGTGAATGGTGTATGTAATGGGTAAACAGAATGAGTATAAAGAGGTTGCAG 821 consensus_9776#1 TTACAGAGAAGTGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 1980 consensus_9776#3 TTACAGAGAA-TGAATGGTGTATGTAATCTGTAAACAGAATGAGTATAAAGAGGTTGCAG 219 ********** ***************** ****************************** consensus_9776#0 TATCACTGTGTCCTATCACAGAAGAGGTTGCAGTG------------------------- 2655 consensus_9776#2 TA---------------------------------------------------------- 823 consensus_9776#1 TATCACTGTGTCCTATCACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAGGCCACA 2040 consensus_9776#3 TAAAAAAAAAAAAAAAAAAA---------------------------------------- 239 ** consensus_9776#0 - consensus_9776#2 - consensus_9776#1 T 2041 consensus_9776#3 - |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||