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Oryza sativa
cluster # 9779 cluster # 9779       Sequences # 6       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9779#0 length = 3299 sequences # 5  
 consensus_9779#1 length = 844 sequences # 1  
consensusID : consensus_9779#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3299
fasta sequence 
                              [TCTTCTTCCCCACTGGCCGTCTCTCCCCGCACCACCATTCGCGCACGACCGCCGCGGCGGCAGCCAACTCCGGCGAGGGCCATGTCCGGCGGCGGATGCAGCGTCCGGGCGATCTGGATCCTCACCCCGCACGACGCCGTCGCCTTCTCCAGGCGATTTGCGGTGGTGGAGAAGCGGTGGCGGGTCGCGTGGGAGGCGGAGGGCGGGGCGAGGGCGGAGATGATGCCGCTGCCGGCTGACTACGAGGTCGCCGCCGCCTTCGCCGAACGCCGGAGAAGGGAAGGCACGGCGCGTGGTTCTGGAATCCGTACGAGCATGTCATCTGCTGGGTCGGATTCGTGGGTTGATGATCCAATCACTCGCCACATTATATCACTCCATATTGATAAAGAGGAAGGAGAGGGGTTTATGCTGTGGCCTGTGGTTCTTCAGAAGCGGGGTAGCTATTATATCCTTGTGTTGCCTTTGGTGGATCCTCAATCATTTAAAGCATATGAAAGCCTCTTGAAAAGGTCGGACTGCGGGAGTTCTGCCAAGGAGAAGGGCAATCTTTCTTCCATTCTGCTCAACCTTCCATGCATAACAGGGTAATGGCATTAATGGTTGCACATGTTATTGGGGACATAATTACTGGTGATACCGCTGAGCCTGAGGTGATCGTTAGTACTGGCCCCTCTGTTGGTGGGCTGTTAGATTCATTGACAGGAAGTATAGGTATTTCTGCTCGACCAAAACCTATTGCTGCACCTGTCGCAGCCCCGACCGCATCAATTTCTTCACCTGTTGGTGCTCCTCAGTCGGAGTCTCTGAAAGGTGGTATGAGGCCTTTTGACAAGGATTTACTACGGAATTTCATCCTTGGTGCGATGCCTTTTGGAACACCTCAGGATCTTAATTATGCCAATGTTACTTCGGTAAGAACAACTGGGTTTTCCGCTGATCCTCTACCTACAGACCAGAAGCAGCCTGCCTGGAAACCTTATCTGTACAAAGGGAGACAAAGGACTCTCTTCTCAAGCCTAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTTCTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGTCTGGGTTAAAAGCTGCTCGTGTGGAGGTTTCATCGTTCCATCACTGTGTGCAAGCTTCAGAGCCTACCAATGATAAGCAAACTCTAATATTTCAACCACCACTAGGAAATTTTGTTTTGATGCACTATCAAGCTTCATGCAACATGGACCCACCTGTTAAAGGTTTCTACCAGTTGTCTATGGTGTCTGAGAATGAAGGTGCTTTTCTATTTAAGCTGAGATTGATGGAGGGTTACAAATCTCCCTTTCTTATGGAATTTTGCATGGTTACAATGCCGTTTCCTCGAAGACGAGTTGCATCATATGATGGAAATCCATCTGTTGGGACAGTTTCAATGACAGAACATTCAATTGAATGGAGAATCGTTTCAAGCGGTCGGGGCCTCAGTGGAAGGAGCATTGAGGCTACCTTCTCTGGTACTGTTAGATTCCATCCTATAACAATCCAGCGAGTAAATTCATCATTTCGATCAGTTCCAAGCACTGCATTTGTTGAAGATAGTGTTAGTGAACAAGACAATACTAAGAATGGTGCCAATTTGGATGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTCTGGTCTAACAATTGATCCAAAATCTGTAAGTTATTCATTAACTTTCTTGTTCCATTCTGATGGTTTATGCTTTGACCTCAATTAATCAGTTGAATAGTTATGCATTACCATCCCATGGTTGATCATTTGATCTGCAAATCTGATGCACAAACTATGTCGATATTGAGTGACTGATGTTTAGTGTTTTCATTGGGTGAAGAAAAATGTCAGACAAATATTACCAATTTACCATGTCACTGTCACACAGGGTGCATTCAGTCCCTTCCCATTGAAAAACTCAGTAGCTAGGTTGAGATGTTGTGGTGCTTGCTCGAGTTTTACCTACTGTGTTATCAGTTATGAAAAGGCAGAATATTTGTCCATGTGTCCATGGATTTAGGAAGCATACCAGGCTGATGGTATGTTGGTAACCTCTGGTGCCAACAATTATGCTAATGTTTCATTACTTCCCTGCTTAAAGAGGATTACTCTAAAATTTCTCCTTCCAATGTCTTGAACTCTTGATCACTATTCTTGAATTCTTCTTTTGTCACTGTGGTGATTTGGACATTTGGTATAAAGTTAATTGCATTGGCTGTGTTAAAAGGAACTCCTATTCTTTATTCAAATATGGACCATGATCATAAATTTGTACTTTCCTTTTTTGCTACTTTAAAGTTTAACGGCCTTCTGCAGGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATACTCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCTGCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGGGCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACATCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAAAAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTT-GAGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCA-TGACCTTA-TTGGGCAA-TAAAATTCCATTTCGTAGGATTACTAGCA-GCATGTTGAGATAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTCTGGGCCTCCTTCTCTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTCTTTTGCTAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAGGAATAACATGACCGGCCAAAAAAACAAGGAACATAGGGCAACATTTTCCTCAAAAAAAAAA]

[+] EMBL AK067915             [TCTTCTTCCCCACTGGCCGTCTCTCCCCGCACCACCATTCGCGCACGACCGCCGCGGCGGCAGCCAACTCCGGCGAGGGCCATGTCCGGCGGCGGATGCAGCGTCCGGGCGATCTGGATCCTCACCCCGCACGACGCCGTCGCCTTCTCCAGGCGATTTGCGGTGGTGGAGAAGCGGTGGCGGGTCGCGTGGGAGGCGGAGGGCGGGGCGAGGGCGGAGATGATGCCGCTGCCGGCTGACTACGAGGTCGCCGCCGCCTTCGCCGAACGCCGGAGAAGGGAAGGCACGGCGCGTGGTTCTGGAATCCGTACGAGCATGTCATCTGCTGGGTCGGATTCGTGGGTTGATGATCCAATCACTCGCCACATTATATCACTCCATATTGATAAAGAGGAAGGAGAGGGGTTTATGCTGTGGCCTGTGGTTCTTCAGAAGCGGGGTAGCTATTATATCCTTGTGTTGCCTTTGGTGGATCCTCAATCATTTAAAGCATATGAAAGCCTCTTGAAAAGGTCGGACTGCGGGAGTTCTGCCAAGGAGAAGGGCAATCTTTCTTCCATTCTGCTCAACCTTCCATGCATAACAGGGTAATGGCATTAATGGTTGCACATGTTATTGGGGACATAATTACTGGTGATACCGCTGAGCCTGAGGTGATCGTTAGTACTGGCCCCTCTGTTGGTGGGCTGTTAGATTCATTGACAGGAAGTATAGGTATTTCTGCTCGACCAAAACCTATTGCTGCACCTGTCGCAGCCCCGACCGCATCAATTTCTTCACCTGTTGGTGCTCCTCAGTCGGAGTCTCTGAAAGGTGGTATGAGGCCTTTTGACAAGGATTTACTACGGAATTTCATCCTTGGTGCGATGCCTTTTGGAACACCTCAGGATCTTAATTATGCCAATGTTACTTCGGTAAGAACAACTGGGTTTTCCGCTGATCCTCTACCTACAGACCAGAAGCAGCCTGCCTGGAAACCTTATCTGTACAAAGGGAGACAAAGGACTCTCTTCTCAAGCCTAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTTCTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGTCTGGGTTAAAAGCTGCTCGTGTGGAGGTTTCATCGTTCCATCACTGTGTGCAAGCTTCAGAGCCTACCAATGATAAGCAAACTCTAATATTTCAACCACCACTAGGAAATTTTGTTTTGATGCACTATCAAGCTTCATGCAACATGGACCCACCTGTTAAAGGTTTCTACCAGTTGTCTATGGTGTCTGAGAATGAAGGTGCTTTTCTATTTAAGCTGAGATTGATGGAGGGTTACAAATCTCCCTTTCTTATGGAATTTTGCATGGTTACAATGCCGTTTCCTCGAAGACGAGTTGCATCATATGATGGAAATCCATCTGTTGGGACAGTTTCAATGACAGAACATTCAATTGAATGGAGAATCGTTTCAAGCGGTCGGGGCCTCAGTGGAAGGAGCATTGAGGCTACCTTCTCTGGTACTGTTAGATTCCATCCTATAACAATCCAGCGAGTAAATTCATCATTTCGATCAGTTCCAAGCACTGCATTTGTTGAAGATAGTGTTAGTGAACAAGACAATACTAAGAATGGTGCCAATTTGGATGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTCTGGTCTAACAATTGATCCAAAATCTGTAAGTTATTCATTAACTTTCTTGTTCCATTCTGATGGTTTATGCTTTGACCTCAATTAATCAGTTGAATAGTTATGCATTACCATCCCATGGTTGATCATTTGATCTGCAAATCTGATGCACAAACTATGTCGATATTGAGTGACTGATGTTTAGTGTTTTCATTGGGTGAAGAAAAATGTCAGACAAATATTACCAATTTACCATGTCACTGTCACACAGGGTGCATTCAGTCCCTTCCCATTGAAAAACTCAGTAGCTAGGTTGAGATGTTGTGGTGCTTGCTCGAGTTTTACCTACTGTGTTATCAGTTATGAAAAGGCAGAATATTTGTCCATGTGTCCATGGATTTAGGAAGCATACCAGGCTGATGGTATGTTGGTAACCTCTGGTGCCAACAATTATGCTAATGTTTCATTACTTCCCTGCTTAAAGAGGATTACTCTAAAATTTCTCCTTCCAATGTCTTGAACTCTTGATCACTATTCTTGAATTCTTCTTTTGTCACTGTGGTGATTTGGACATTTGGTATAAAGTTAATTGCATTGGCTGTGTTAAAAGGAACTCCTATTCTTTATTCAAATATGGACCATGATCATAAATTTGTACTTTCCTTTTTTGCTACTTTAAAGTTTAACGGCCTTCTGCAGGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATACTCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCTGCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGGGCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACATCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAAAAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTT GAGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCA TGACCTTA TTGGGCAA TAAAATTCCATTTCGTAGGATTACTAGCA GCATGTTGAGATAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTCTGGGCCTCCTTCTCTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTCTTTTGCTAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAGGAATAAC                                                      ]
[+] EMBL CB631103             [                                                                                                                                                                                                                                                                                                                                                                   TCACTCGCCACATTATATCACTCCATATTGATAAAGAGGAAGGAGAGGGGTTTATGCTGTGGCCTGTGGTTCTTCAGAAGCGGGGTAGCTATTATATCCTTGTGTTGCCTTTGGTGGATCCTCAATCATTTAAAGCATATGAAAGCCTCTTGAAAAGGTCGGACTGCGGGAGTTCTGCCAAGGAGAAGGGCAATCTTTCTTCCATTCTGCTCAACCTTCCATGCATAACAGG     GGCATTAATGGTTGCACATGTTATTGGGGACATAATTACTGGTGATACCGCTGAGCCTGAGGTGATCGTTAGTACTGGCCCCTCTGTTGGTGGGCTGTTAGATTCATTGACAGGAAGTATAGGTATTTCTGCTCGACCAAAACCTATTGCTGCACCTGTCGCAGCCCCGACCGCATCAATTTCCTCACCTGTTGGTGCTCCTCAGTCGGAGTCTCTGAAAGGTGGTATGAGGCCTTTTGACAAGGATTTACTACGGAACTTCATCCTTGGTGCGATGCCTTTTGGAACACCTCAGGATCTTAATTATGCCAATGTTACTTCGGTAAGAACAACTGGGTTTTCCGCTGATCCTCTACCTACAGACCAGAAGCAGCCTGCCTGGAAACCTTATCTGTACAAAGGGAGACAAAGGACTCTCTTCTCAAGCCTAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTTCTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGTCTGGGGTAAAAGCTGCTCATGTGGAGGTTTCAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CB646715             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CTCTTCTCTAGCCTAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTTCTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGTCTGGGTTAAAAGCTGCTCGTGTGGAGGTTTCATCGTTCCATCACTGTGTGCAAGCTTCAGAGCCTACCAATGATAAGCAAACTCTAATATTTCAACCACCACTAGGAAATTTTGTTTTGATGCACTATCAAGCTTCATGCAACATGGACCCACCTGTTAAAGGTTTCTACCAGTTGTCTATGGTGTCTGAGAATGAAGGTGCTTTTCTATTTAAGCTGAGATTGATGGAGGGTTACAAATCTCCCTTTCTTATGGAATTTTGCATGGTTACAATGCCGTTTCCTCGAAGACGAGTTGCATCATATGATGGAAATCCATCTGTTGGGACAGTTTCAATGACAGAACATTCAATTGAATGGAGAATCGTTTCAAGCGGTCGGGGCCTCAGTGGAAGGAGCATTGAGGCTACCTTCTCTGGTACTGTTAGATTCCATCCTATAACAATCCAGCGAGTAAATTCATCATTTCGATCAGTTCCAAGCACTGCATTTGTTGAAGATAGTGATAGTGAACAAGACAATACTAAGAATGGTGCCAATTTGGATGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCCAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTCTGGTCTAACAATTGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[-] EMBL CB646716             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           TGATTTTTATTCACATCACCAGACTTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTTTTGTTTCAAGGGAAAAAAAGGAACCCAACAATTCTGGATATATTTATGTCAGACTTTGGTATTCTAAACTT GAGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCA TGCCCTTA TTGGGCAA TAAAATTCCATTTGGTAGGATTACTAGCA GCATGTTGAGATAATTTCCATGTCAGGAAATATGGTATTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTTTGGGCCTCCTTTTTTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTTTTTTGTTAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAGGAATAACA                                                     ]
[+] EMBL BI813454             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAAACTTGGAGTTCATGATTGGG CCAATCCCGTTTTCGAGAAAAAAATTGATTGGGTCCAATATTGAACCCATTGACCTTAGTTGGCCAAGTAAAATGCCATTTCGTAGGATTACTACCACGCATGTTGAGATAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACC ACTCATTGTCCAC AACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTCTGGGCCTCCTTCTCTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTCTTTTGCTAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAGGAATAACATGACCGGCCAAAAAAACAAGGAACATAGGGCAACATTTTCCTCAAAAAAAAAA]




>consensus_9779#0
TCTTCTTCCCCACTGGCCGTCTCTCCCCGCACCACCATTCGCGCACGACCGCCGCGGCGG
CAGCCAACTCCGGCGAGGGCCATGTCCGGCGGCGGATGCAGCGTCCGGGCGATCTGGATC
CTCACCCCGCACGACGCCGTCGCCTTCTCCAGGCGATTTGCGGTGGTGGAGAAGCGGTGG
CGGGTCGCGTGGGAGGCGGAGGGCGGGGCGAGGGCGGAGATGATGCCGCTGCCGGCTGAC
TACGAGGTCGCCGCCGCCTTCGCCGAACGCCGGAGAAGGGAAGGCACGGCGCGTGGTTCT
GGAATCCGTACGAGCATGTCATCTGCTGGGTCGGATTCGTGGGTTGATGATCCAATCACT
CGCCACATTATATCACTCCATATTGATAAAGAGGAAGGAGAGGGGTTTATGCTGTGGCCT
GTGGTTCTTCAGAAGCGGGGTAGCTATTATATCCTTGTGTTGCCTTTGGTGGATCCTCAA
TCATTTAAAGCATATGAAAGCCTCTTGAAAAGGTCGGACTGCGGGAGTTCTGCCAAGGAG
AAGGGCAATCTTTCTTCCATTCTGCTCAACCTTCCATGCATAACAGGGTAATGGCATTAA
TGGTTGCACATGTTATTGGGGACATAATTACTGGTGATACCGCTGAGCCTGAGGTGATCG
TTAGTACTGGCCCCTCTGTTGGTGGGCTGTTAGATTCATTGACAGGAAGTATAGGTATTT
CTGCTCGACCAAAACCTATTGCTGCACCTGTCGCAGCCCCGACCGCATCAATTTCTTCAC
CTGTTGGTGCTCCTCAGTCGGAGTCTCTGAAAGGTGGTATGAGGCCTTTTGACAAGGATT
TACTACGGAATTTCATCCTTGGTGCGATGCCTTTTGGAACACCTCAGGATCTTAATTATG
CCAATGTTACTTCGGTAAGAACAACTGGGTTTTCCGCTGATCCTCTACCTACAGACCAGA
AGCAGCCTGCCTGGAAACCTTATCTGTACAAAGGGAGACAAAGGACTCTCTTCTCAAGCC
TAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTT
CTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGT
CTGGGTTAAAAGCTGCTCGTGTGGAGGTTTCATCGTTCCATCACTGTGTGCAAGCTTCAG
AGCCTACCAATGATAAGCAAACTCTAATATTTCAACCACCACTAGGAAATTTTGTTTTGA
TGCACTATCAAGCTTCATGCAACATGGACCCACCTGTTAAAGGTTTCTACCAGTTGTCTA
TGGTGTCTGAGAATGAAGGTGCTTTTCTATTTAAGCTGAGATTGATGGAGGGTTACAAAT
CTCCCTTTCTTATGGAATTTTGCATGGTTACAATGCCGTTTCCTCGAAGACGAGTTGCAT
CATATGATGGAAATCCATCTGTTGGGACAGTTTCAATGACAGAACATTCAATTGAATGGA
GAATCGTTTCAAGCGGTCGGGGCCTCAGTGGAAGGAGCATTGAGGCTACCTTCTCTGGTA
CTGTTAGATTCCATCCTATAACAATCCAGCGAGTAAATTCATCATTTCGATCAGTTCCAA
GCACTGCATTTGTTGAAGATAGTGTTAGTGAACAAGACAATACTAAGAATGGTGCCAATT
TGGATGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGC
CATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCC
TTTCTGGTCTAACAATTGATCCAAAATCTGTAAGTTATTCATTAACTTTCTTGTTCCATT
CTGATGGTTTATGCTTTGACCTCAATTAATCAGTTGAATAGTTATGCATTACCATCCCAT
GGTTGATCATTTGATCTGCAAATCTGATGCACAAACTATGTCGATATTGAGTGACTGATG
TTTAGTGTTTTCATTGGGTGAAGAAAAATGTCAGACAAATATTACCAATTTACCATGTCA
CTGTCACACAGGGTGCATTCAGTCCCTTCCCATTGAAAAACTCAGTAGCTAGGTTGAGAT
GTTGTGGTGCTTGCTCGAGTTTTACCTACTGTGTTATCAGTTATGAAAAGGCAGAATATT
TGTCCATGTGTCCATGGATTTAGGAAGCATACCAGGCTGATGGTATGTTGGTAACCTCTG
GTGCCAACAATTATGCTAATGTTTCATTACTTCCCTGCTTAAAGAGGATTACTCTAAAAT
TTCTCCTTCCAATGTCTTGAACTCTTGATCACTATTCTTGAATTCTTCTTTTGTCACTGT
GGTGATTTGGACATTTGGTATAAAGTTAATTGCATTGGCTGTGTTAAAAGGAACTCCTAT
TCTTTATTCAAATATGGACCATGATCATAAATTTGTACTTTCCTTTTTTGCTACTTTAAA
GTTTAACGGCCTTCTGCAGGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATACTC
AATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCTGC
TGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGGGC
GCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACATC
ACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAAAA
AAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTGAGTTC
ATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCAT
GACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGATAACT
TCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAAC
ATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAA
TTTTCTGGGCCTCCTTCTCTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGT
CAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTCTTTTGC
TAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAGGA
ATAACATGACCGGCCAAAAAAACAAGGAACATAGGGCAACATTTTCCTCAAAAAAAAAA

consensusID : consensus_9779#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 844
fasta sequence 
                              [TGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTCTGGTCTAACAATTGATCCAAAATCTGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATACTCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCTGCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGGGCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACATCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAAAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTGAGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCATGACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGATAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTTTGGGCCTCCTTCTTTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGACCCGAAAAAAAAAAAAGGA]

[-] EMBL CB631104             [TGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTCTGGTCTAACAATTGATCCAAAATCTGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATACTCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCTGCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGGGCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACATCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAAAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTGAGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCCATGACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGATAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCCAATTTTTTGGGCCTCCTTCTTTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGACCCGAAAAAAAAAAAAGGA]




>consensus_9779#1
TGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGCCATT
GTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCCTTTC
TGGTCTAACAATTGATCCAAAATCTGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGA
ATACTCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCC
TTCTGCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTC
ATGGGCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACT
CACATCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGG
GAAAAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTG
AGTTCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAA
GCCATGACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGA
TAACTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCA
CAAACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGT
CCCAATTTTTTGGGCCTCCTTCTTTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTAT
TTTGTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGACCCGAAAAAAAAAAA
AGGA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9779#0      TCTTCTTCCCCACTGGCCGTCTCTCCCCGCACCACCATTCGCGCACGACCGCCGCGGCGG 60
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CAGCCAACTCCGGCGAGGGCCATGTCCGGCGGCGGATGCAGCGTCCGGGCGATCTGGATC 120
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTCACCCCGCACGACGCCGTCGCCTTCTCCAGGCGATTTGCGGTGGTGGAGAAGCGGTGG 180
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CGGGTCGCGTGGGAGGCGGAGGGCGGGGCGAGGGCGGAGATGATGCCGCTGCCGGCTGAC 240
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TACGAGGTCGCCGCCGCCTTCGCCGAACGCCGGAGAAGGGAAGGCACGGCGCGTGGTTCT 300
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GGAATCCGTACGAGCATGTCATCTGCTGGGTCGGATTCGTGGGTTGATGATCCAATCACT 360
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CGCCACATTATATCACTCCATATTGATAAAGAGGAAGGAGAGGGGTTTATGCTGTGGCCT 420
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GTGGTTCTTCAGAAGCGGGGTAGCTATTATATCCTTGTGTTGCCTTTGGTGGATCCTCAA 480
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TCATTTAAAGCATATGAAAGCCTCTTGAAAAGGTCGGACTGCGGGAGTTCTGCCAAGGAG 540
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      AAGGGCAATCTTTCTTCCATTCTGCTCAACCTTCCATGCATAACAGGGTAATGGCATTAA 600
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TGGTTGCACATGTTATTGGGGACATAATTACTGGTGATACCGCTGAGCCTGAGGTGATCG 660
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TTAGTACTGGCCCCTCTGTTGGTGGGCTGTTAGATTCATTGACAGGAAGTATAGGTATTT 720
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGCTCGACCAAAACCTATTGCTGCACCTGTCGCAGCCCCGACCGCATCAATTTCTTCAC 780
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGTTGGTGCTCCTCAGTCGGAGTCTCTGAAAGGTGGTATGAGGCCTTTTGACAAGGATT 840
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TACTACGGAATTTCATCCTTGGTGCGATGCCTTTTGGAACACCTCAGGATCTTAATTATG 900
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CCAATGTTACTTCGGTAAGAACAACTGGGTTTTCCGCTGATCCTCTACCTACAGACCAGA 960
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      AGCAGCCTGCCTGGAAACCTTATCTGTACAAAGGGAGACAAAGGACTCTCTTCTCAAGCC 1020
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TAGAGACTTTAAATGCTGCACTATATGACCGTGATGATGTGCAAGATTTCCTTTCGGTTT 1080
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGGACAAGTGACATGTAGGGCTGAGCTAGAAGGTTTACCTGATGTTTCTTTGCCATTGT 1140
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGGGTTAAAAGCTGCTCGTGTGGAGGTTTCATCGTTCCATCACTGTGTGCAAGCTTCAG 1200
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      AGCCTACCAATGATAAGCAAACTCTAATATTTCAACCACCACTAGGAAATTTTGTTTTGA 1260
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TGCACTATCAAGCTTCATGCAACATGGACCCACCTGTTAAAGGTTTCTACCAGTTGTCTA 1320
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TGGTGTCTGAGAATGAAGGTGCTTTTCTATTTAAGCTGAGATTGATGGAGGGTTACAAAT 1380
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTCCCTTTCTTATGGAATTTTGCATGGTTACAATGCCGTTTCCTCGAAGACGAGTTGCAT 1440
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CATATGATGGAAATCCATCTGTTGGGACAGTTTCAATGACAGAACATTCAATTGAATGGA 1500
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GAATCGTTTCAAGCGGTCGGGGCCTCAGTGGAAGGAGCATTGAGGCTACCTTCTCTGGTA 1560
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGTTAGATTCCATCCTATAACAATCCAGCGAGTAAATTCATCATTTCGATCAGTTCCAA 1620
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GCACTGCATTTGTTGAAGATAGTGTTAGTGAACAAGACAATACTAAGAATGGTGCCAATT 1680
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TGGATGACTACCTCATGGAAAAAATGAATAAGGACCTTCAAGCAGTTAACTTGGAAGAGC 1740
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CATTGTCCTGGCAAGCTTATAATTATGCTAAGGTTTCTTTTAAGATTGTTGGGGGCACCC 1800
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TTTCTGGTCTAACAATTGATCCAAAATCTGTAAGTTATTCATTAACTTTCTTGTTCCATT 1860
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGATGGTTTATGCTTTGACCTCAATTAATCAGTTGAATAGTTATGCATTACCATCCCAT 1920
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GGTTGATCATTTGATCTGCAAATCTGATGCACAAACTATGTCGATATTGAGTGACTGATG 1980
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TTTAGTGTTTTCATTGGGTGAAGAAAAATGTCAGACAAATATTACCAATTTACCATGTCA 2040
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      CTGTCACACAGGGTGCATTCAGTCCCTTCCCATTGAAAAACTCAGTAGCTAGGTTGAGAT 2100
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GTTGTGGTGCTTGCTCGAGTTTTACCTACTGTGTTATCAGTTATGAAAAGGCAGAATATT 2160
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TGTCCATGTGTCCATGGATTTAGGAAGCATACCAGGCTGATGGTATGTTGGTAACCTCTG 2220
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      GTGCCAACAATTATGCTAATGTTTCATTACTTCCCTGCTTAAAGAGGATTACTCTAAAAT 2280
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      TTCTCCTTCCAATGTCTTGAACTCTTGATCACTATTCTTGAATTCTTCTTTTGTCACTGT 2340
consensus_9779#1      ------------------------------------------TGACTACCTCATGGAAAA 18
                                                                *   *   *  *      

consensus_9779#0      GGTGATTTGGACATTTGGTATAAAGTTAA-TTGCATTGGCTGT-GTTAAAAGGAACTCCT 2398
consensus_9779#1      AATGAATAAGGACCTT--CAAGCAGTTAACTTGGAAGAGCCATTGTCCTGGCAAGCTTAT 76
                        *** *  *    **   *   ****** *** *   **  * **       * **  *

consensus_9779#0      ATTCTTTATTCAAATATGGACCATGATCATAAATTTGTACTTTCCTTTTTTGCTACTTTA 2458
consensus_9779#1      AAT-TATGCTAAGGTTTCTTTTAAGATTGT-----TGGGGGCACCCTTTCTGGT--CTAA 128
                      * * * *  * *  * *     * ***  *     **      ** *** ** *   * *

consensus_9779#0      AAGTTTAACGGCCTTCTGCAGGTAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATAC 2518
consensus_9779#1      CAATTGATCCAAAATCTG----TAACCATTTATCCTTCTGTCAAAGCCCCAGTTGAATAC 184
                       * ** * *     ****    **************************************

consensus_9779#0      TCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCT 2578
consensus_9779#1      TCAATGCAGGCTTCATCTGGAGATTACATACTCTGGAACACTTTAGGAAAATGTCCTTCT 244
                      ************************************************************

consensus_9779#0      GCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGG 2638
consensus_9779#1      GCTGCTTTGCCTAAATAATTATGAATACCGATGGATGTTCATCACCGGACATATTCATGG 304
                      ************************************************************

consensus_9779#0      GCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACA 2698
consensus_9779#1      GCGCGTGTTCTTTGCCGTACAGAACCTACAGTATGGTTCCCCAATTGATCTCTACTCACA 364
                      ************************************************************

consensus_9779#0      TCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAA 2758
consensus_9779#1      TCACCAGACCTATGCTCAAAGTTTTTGAATTTTGTTCAGGAGTTATTGTTTCAAGGGAAA 424
                      ************************************************************

consensus_9779#0      AAAAGGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTGAGT 2818
consensus_9779#1      AAA-GGAACCCAACAATTCTGGATATATCTATGTCAGACTCTGGTATTCTAAACTTGAGT 483
                      *** ********************************************************

consensus_9779#0      TCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCC 2878
consensus_9779#1      TCATGATTGGGTGCAATACCGTTTTCGAGAAAAAAATTGATTGGGTGCAATATTGAAGCC 543
                      ************************************************************

consensus_9779#0      ATGACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGATAA 2938
consensus_9779#1      ATGACCTTATTGGGCAATAAAATTCCATTTCGTAGGATTACTAGCAGCATGTTGAGATAA 603
                      ************************************************************

consensus_9779#0      CTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAA 2998
consensus_9779#1      CTTCCATGTCAGGAAATATGGTACTATATCAGCAAGAAAAAACCAACTCATTGTCCACAA 663
                      ************************************************************

consensus_9779#0      ACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCC 3058
consensus_9779#1      ACATGAGACTTGGCATGATAAATCTGTATGATTACTGGTGATTGAGCCCAAACAGGTCCC 723
                      ************************************************************

consensus_9779#0      AATTTTCTGGGCCTCCTTCTCTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTT 3118
consensus_9779#1      AATTTTTTGGGCCTCCTTCTTTAGGTTGTTAGATAGAGATGTTTCATCTTTATTTATTTT 783
                      ****** ************* ***************************************

consensus_9779#0      GTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGAACCGAGACATTTTCTTTT 3178
consensus_9779#1      GTCAGTCCTTGACAGAGGAATGTCATGTTGAAGGTCCATTGACCCGAAAAAAAAAAAAGG 843
                      ****************************************** **** * *         

consensus_9779#0      GCTAATGTCATGCATGATGCCATTGAGATAGATGATGTAATATTCGGATTGCATTGAAAG 3238
consensus_9779#1      A----------------------------------------------------------- 844
                                                                                  

consensus_9779#0      GAATAACATGACCGGCCAAAAAAACAAGGAACATAGGGCAACATTTTCCTCAAAAAAAAA 3298
consensus_9779#1      ------------------------------------------------------------
                                                                                  

consensus_9779#0      A 3299
consensus_9779#1      -


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)