cluster # 9792

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Oryza sativa
cluster # 9792 cluster # 9792 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9792#0 length = 2267 sequences # 6
consensusID : consensus_9792#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 2267
fasta sequence
                              [TGAAACCCTTTCGTCTTCTCCACTCTGCTCTTCTCCTCCTGCAACCAAATCCCTCGTTGTCTCCCTCCCCGCCTTCCCGCCAGGTGTCAGCCATGCGGGAGCCACGTCGCCCTCTCCTCCCCCTCCCCCTCCCCCACCTCCTCCTCGTCTCTCTCCTCTCCTCCTCTGCCGCCGCACCGGGAGCAGGAGCAGGAGCACCGCCAAGAACCGGCGGCGGCGGCGTCGCGAGGAGCATCGCCGACATGGCGTGGCCAACAAAATGCACATGGTTACCCTGGCCAACCTGTGGGAAGAGCCATTCATATACTCTTGTTTCCAAATACCACAAGATCTGGAAGGATACAAAGGAGGCTGTTTCTACAAAAGATGTTTCCAGAAAAGAACCAATTACTGGTGTGATTGCATTGAAGGCTTCCATGAAGTACTTCGATGCTGATTTTTTCAACGATTCAAAACTTCGGGAGATGGAAGATGGTGCAAAAGAATTTAATGTACCTGCATTTAGAGACAACCGGAAATTGGTGGCGTTAGAGAATGGTGGATTGCATAACCCGTCTGCATTGGTCTTTAAATCATCATGGAGCGATGAAAGCAAAATCAGTGAGAACAAAAGCTTTCAATATCCCCATACATCTTCAGTACATCGCCCTAGTAAAGATGAAGATATTGCTTTTATGTCGATAATTGAGCTCGGGGAGCTTATAAGGACAAAGCAAGTCACATCGCGTGAACTTACTGCTGTGTTCTTAAGGAGATTAAAGAGGTATGGTCCTATAATCGAATCCGTTATTACTATCACTGATGATTTAGCATACAAACAAGCGAAAGAAGCTGATGACTTGCTGGAGCAAGGAAAATATCTTGGTCCCTTACATGGCATTCCGTATGGCCTTAAGGATATAATTGCAGTACCAGAATACAAAACTACCTGGGGCTCAAGAACTTTTGAAAACCAAATTCTTGATGTCGAAGCCTCTGTCTACAAAAGATTGAAGTCAACTGGGGCAGTCCTTGTAGCAAAACTTGTAACAGGCTCGCTCGCCTATGATGATATATGGTTTGGGGGGAGAACAAGAAACCCCTGGAACATTGAGGAGTTTTCTACTGGTTCATCAGCAGGGCCAGCAGCTAGCACCTCTGCAGGAATGGTTCCTTTTGCAATAGGTTCAGAAACTGCAGGTTCCATAACATATCCTGCCGCTAGATGTGGAGTAACTGCTTTGCGCACAACATTTGGAACAGTTGCACGGACGGGCGTCATGAGCATTTCAGAGAGCTTGGATAAACTTGGTCCTTTCTGCAGAAGCGCGATAGATTGCGCAGTTGTACTTGACGCAATTCGCGGCAAGGATGCCGGCGATCCATCATCTCGTGAAGTTGCTATCGAGGATCCCTTTCATGTTGACATCAGACAACTCACTGTTGGATATCTTGACAGTGCTGAGATGGAGGTTGTTCATGTTCTTTCCGCTAAGGGTGTTAAGCTAGTGCCTTTCAAGCTGAACTACACCGTTCAATCGGTCCAATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAAGAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTCTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGACGATCTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTTTCATGAAAGCTGAAGTTCCAGATGATTGACCACTGTGTTAATTTCCTTGAGAAACATGAGATGTAATATATATGAACTTACAGAATTTGTCTCAGTTGCGAGTCATTTGAGAAAGTAACAGGACTCATCAGATGTATACACAGCTTGATAGTGAATTTTTTTTATTTTTAATTTTTTTATTAAAGGTTTTACAAAAATAATTTTCATTTGAAAAAAAAAAAAAAGGA]

[+] EMBL AK102704             [TGAAACCCTTTCGTCTTCTCCACTCTGCTCTTCTCCTCCTGCAACCAAATCCCTCGTTGTCTCCCTCCCCGCCTTCCCGCCAGGTGTCAGCCATGCGGGAGCCACGTCGCCCTCTCCTCCCCCTCCCCCTCCCCCACCTCCTCCTCGTCTCTCTCCTCTCCTCCTCTGCCGCCGCACCGGGAGCAGGAGCAGGAGCACCGCCAAGAACCGGCGGCGGCGGCGTCGCGAGGAGCATCGCCGACATGGCGTGGCCAACAAAATGCACATGGTTACCCTGGCCAACCTGTGGGAAGAGCCATTCATATACTCTTGTTTCCAAATACCACAAGATCTGGAAGGATACAAAGGAGGCTGTTTCTACAAAAGATGTTTCCAGAAAAGAACCAATTACTGGTGTGATTGCATTGAAGGCTTCCATGAAGTACTTCGATGCTGATTTTTTCAACGATTCAAAACTTCGGGAGATGGAAGATGGTGCAAAAGAATTTAATGTACCTGCATTTAGAGACAACCGGAAATTGGTGGCGTTAGAGAATGGTGGATTGCATAACCCGTCTGCATTGGTCTTTAAATCATCATGGAGCGATGAAAGCAAAATCAGTGAGAACAAAAGCTTTCAATATCCCCATACATCTTCAGTACATCGCCCTAGTAAAGATGAAGATATTGCTTTTATGTCGATAATTGAGCTCGGGGAGCTTATAAGGACAAAGCAAGTCACATCGCGTGAACTTACTGCTGTGTTCTTAAGGAGATTAAAGAGGTATGGTCCTATAATCGAATCCGTTATTACTATCACTGATGATTTAGCATACAAACAAGCGAAAGAAGCTGATGACTTGCTGGAGCAAGGAAAATATCTTGGTCCCTTACATGGCATTCCGTATGGCCTTAAGGATATAATTGCAGTACCAGAATACAAAACTACCTGGGGCTCAAGAACTTTTGAAAACCAAATTCTTGATGTCGAAGCCTCTGTCTACAAAAGATTGAAGTCAACTGGGGCAGTCCTTGTAGCAAAACTTGTAACAGGCTCGCTCGCCTATGATGATATATGGTTTGGGGGGAGAACAAGAAACCCCTGGAACATTGAGGAGTTTTCTACTGGTTCATCAGCAGGGCCAGCAGCTAGCACCTCTGCAGGAATGGTTCCTTTTGCAATAGGTTCAGAAACTGCAGGTTCCATAACATATCCTGCCGCTAGATGTGGAGTAACTGCTTTGCGCACAACATTTGGAACAGTTGCACGGACGGGCGTCATGAGCATTTCAGAGAGCTTGGATAAACTTGGTCCTTTCTGCAGAAGCGCGATAGATTGCGCAGTTGTACTTGACGCAATTCGCGGCAAGGATGCCGGCGATCCATCATCTCGTGAAGTTGCTATCGAGGATCCCTTTCATGTTGACATCAGACAACTCACTGTTGGATATCTTGACAGTGCTGAGATGGAGGTTGTTCATGTTCTTTCCGCTAAGGGTGTTAAGCTAGTGCCTTTCAAGCTGAACTACACCGTTCAATCGGTCCAATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGTACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGGGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAAGAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTCTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGACGATCTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTTTCATGAAAGCTGAAGTTCCAGATGATTGACAACTGTGTTAATTTCCTTGAGAAACATGAGATGTAATATATATGAACTTACAGAATTTGTCTCAGTTGCGAGTCATTTGAGAAAGTAACAGGACT                                                                                                      ]
[+] EMBL CB665651             [                          GCTCTTCTCCTCCTGCAACCAAATCCCTCGTTGTCTCCCTCCCCGCCTTCCCGCCAGGTGTCAGCCATGCGGGAGCCACGTCGCCCTCTCCTCCCCCTCCCCCTCCCCCACCTCCTCCTCGTCTCTCTCCTCTCCTCCTCTGCCGCCGCACCGGGAGCAGGAGCAGGAGCACCGCCAAGAACCGGCGGCGGCGGCGTCGCGAGGAGCATCGCCGACATGGCGTGGCCAACAAAATGCACATGGTTACCCTGGCCAACCTGTGGGAAGAGCCATTCATATACTCTTGTTTCCAAATACCACAAGATCTGGAAGGATACAAAGGAGGCTGTTTCTGCAAAAGATGTTTCCAGAAAAGAACCAATTACTGGTGTGATTGCATTGAAGGCTTCCATGAAGTACTTCGATGCTGATTTTTTCAACGATTCAAAACTTCGGGAGATGGAAGATGGTGCAAAAGAATTTAATGTACCTGCATTTAGAGACAACCGGAAATTGGTGGCGTTAGAGAATGGTGGATTGCATAACCCGTCTGCATTGGTCTTTAAATCATCATGGAGCGATGAAAGCAAAATCAGTGAGAACAAAAGCTTTCAATATCCCCATACATCTTCAGTACATCGCCCTAGTAAAGATGAAGATATTGCTTTTATGTCGATAATTGAGCTCGGGGAGCTTATAAGGACAAAGCAAGTCACATCGCGTGAACTTACTGCTGTGTTCTTAAGGAGATTAAAGAGGTATGGTCCTATAATCGAATCCGTTATTACTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK059236             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       TAGCATACAAACAAGCGAAAGAAGCTGATGACTTGCTGGAGCAAGGAAAATATCTTGGTCCCTTACATGGCATTCCGTATGGCCTTAAGGATATAATTGCAGTACCAGAATACAAAACTACCTGGGGCTCAGGAACTTTTGAAAACCAAATTCTTGATGTCGAAGCCTCTGTCTACAAAAGATTGAAGTCAACTGGGGCAGTCCTTGTAGCAAAACTTGTAACAGGCTCGCTCGCCTATGATGATATATGGTTTGGGGGGAGAACAAGAAACCCCTGGAACATTGAGGAGTTTTCTACTGGTTCATCAGCAGGGCCAGCAGCTAGCACCTCTGCAGGAATGGTTCCTTTTGCAATAGGTTCAGAAACTGCAGGTTCCATAACATATCCTGCCGCTAGATGTGGAGTAACTGCTTTGCGCACAACATTTGGAACAGTTGCACGGACGGGCGTCATGAGCATTTCAGAGAGCTTGGATAAACTTGGTCCTTTCTGCAGAAGCGCGATAGATTGCGCAGTTGTACTTGACGCAATTCGCGGCAAGGATGCCGGCGATCCATCATCTCGTGAAGTTGCTATCGAGGATCCCTTTCATGTTGACATCAGACAACTCACTGTTGGATATCTTGACAGTGCTGAGATGGAGGTTGTTCATGTTCTTTCCGCTAAGGGTGTTAAGCTAGTGCCTTTCAAGCTGAACTACACCGTTCAATCGGTCCAATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAAGAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTCTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGGCGATCTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTTTCATGAAAGCTGAAGTTCCAGATGATTGACCACTGTGTTAATTTCCTTGAGAAACATGAGATGTAATATATAT                                                                                                                                                          ]
[+] EMBL CA999940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGTGCCTTTCAAGCTGAACTACACCGTTCAATCCGTCCAATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAAGAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTCTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGACGATCTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTTTCATGAAAGCTGAAGTTCCAGATGATTGACCACTGTGTTAATTTCCTTGAGAAACATGAGATGTAATATATATGAACTTACAGAATTTGTCTCAGTTGCGAGTCATTTGAGAAAGTAAaaaaaa                                                                                                       ]
[+] EMBL CA999845             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TGCCTTTC AGCTGAACTACACCGTTCAATCGGTCC ATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAAGAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTCTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGACGATCTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATG                                                                                                                                                                                                                                                    ]
[-] EMBL CB665652             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 TCCAATCCATACTGAACATCACCATGGATGTTGACATGCTTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACCAATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCACAACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCATCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGGCTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCCCCAGAAGGCGGCACGCGGAGAAGAACCCCCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTTTAGCTTTGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATTGACGATTTAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTTTCATGAAAGCTGAAGTTCCAGATGATTGACCCCTGTGTTAATTTCCTTGAGAAACATGAGATGTAATATATATGAACTTACAGAATTTGTTTCAGTTGCGAGTCATTTGAGAAAGTAACAGGACTCATCAGATGTATACACAGCTTGATAGTGAATTTTTTTTATTTTTAATTTTTTTATTAAAGGTTTTACAAAAATAATTTTCATTTGAAAAAAAAAAAAAAGGA]




>consensus_9792#0
TGAAACCCTTTCGTCTTCTCCACTCTGCTCTTCTCCTCCTGCAACCAAATCCCTCGTTGT
CTCCCTCCCCGCCTTCCCGCCAGGTGTCAGCCATGCGGGAGCCACGTCGCCCTCTCCTCC
CCCTCCCCCTCCCCCACCTCCTCCTCGTCTCTCTCCTCTCCTCCTCTGCCGCCGCACCGG
GAGCAGGAGCAGGAGCACCGCCAAGAACCGGCGGCGGCGGCGTCGCGAGGAGCATCGCCG
ACATGGCGTGGCCAACAAAATGCACATGGTTACCCTGGCCAACCTGTGGGAAGAGCCATT
CATATACTCTTGTTTCCAAATACCACAAGATCTGGAAGGATACAAAGGAGGCTGTTTCTA
CAAAAGATGTTTCCAGAAAAGAACCAATTACTGGTGTGATTGCATTGAAGGCTTCCATGA
AGTACTTCGATGCTGATTTTTTCAACGATTCAAAACTTCGGGAGATGGAAGATGGTGCAA
AAGAATTTAATGTACCTGCATTTAGAGACAACCGGAAATTGGTGGCGTTAGAGAATGGTG
GATTGCATAACCCGTCTGCATTGGTCTTTAAATCATCATGGAGCGATGAAAGCAAAATCA
GTGAGAACAAAAGCTTTCAATATCCCCATACATCTTCAGTACATCGCCCTAGTAAAGATG
AAGATATTGCTTTTATGTCGATAATTGAGCTCGGGGAGCTTATAAGGACAAAGCAAGTCA
CATCGCGTGAACTTACTGCTGTGTTCTTAAGGAGATTAAAGAGGTATGGTCCTATAATCG
AATCCGTTATTACTATCACTGATGATTTAGCATACAAACAAGCGAAAGAAGCTGATGACT
TGCTGGAGCAAGGAAAATATCTTGGTCCCTTACATGGCATTCCGTATGGCCTTAAGGATA
TAATTGCAGTACCAGAATACAAAACTACCTGGGGCTCAAGAACTTTTGAAAACCAAATTC
TTGATGTCGAAGCCTCTGTCTACAAAAGATTGAAGTCAACTGGGGCAGTCCTTGTAGCAA
AACTTGTAACAGGCTCGCTCGCCTATGATGATATATGGTTTGGGGGGAGAACAAGAAACC
CCTGGAACATTGAGGAGTTTTCTACTGGTTCATCAGCAGGGCCAGCAGCTAGCACCTCTG
CAGGAATGGTTCCTTTTGCAATAGGTTCAGAAACTGCAGGTTCCATAACATATCCTGCCG
CTAGATGTGGAGTAACTGCTTTGCGCACAACATTTGGAACAGTTGCACGGACGGGCGTCA
TGAGCATTTCAGAGAGCTTGGATAAACTTGGTCCTTTCTGCAGAAGCGCGATAGATTGCG
CAGTTGTACTTGACGCAATTCGCGGCAAGGATGCCGGCGATCCATCATCTCGTGAAGTTG
CTATCGAGGATCCCTTTCATGTTGACATCAGACAACTCACTGTTGGATATCTTGACAGTG
CTGAGATGGAGGTTGTTCATGTTCTTTCCGCTAAGGGTGTTAAGCTAGTGCCTTTCAAGC
TGAACTACACCGTTCAATCGGTCCAATCCATACTGAACATCACCATGGATGTTGACATGC
TTGCGCATTTCGACAACTGGCAACGCGAGCGACACGACGACGACTATGAAGCTCAGGACC
AATGGCCAGTGGAGCTTCGCCGCGCACGGTTAATCCCCGCAGTCGACTATATACAGGCAC
AACGAGCACGGGGTAAACTGATCAGAGAAGTCAGGGAGAGCTTCACGGTCGATGCATTCA
TCGGCAATGTGACCGACTGGGAGCTCGTCTGTCTTGGAAACCTTGTGGGGATGCCGGTGG
CTGTGGTGCCGACAGGCTTGAAGAGCATCAAGAACCCACCAGAAGGCGGCACGCGGAGAA
GAACCACCGTGACGACGGGCATATACGCTCCTCCTGACCATGACCACGTTGCTCTAGCTC
TGGCAATGGCGTACCAGTCTGTGACTGACCACCACAAACAACGCCCAGCGATCGACGATC
TAGGACCGGGAGATGACATACAGCGGTAAGCAGTGGCTGGATGACGATGATGGTGTATTT
TCATGAAAGCTGAAGTTCCAGATGATTGACCACTGTGTTAATTTCCTTGAGAAACATGAG
ATGTAATATATATGAACTTACAGAATTTGTCTCAGTTGCGAGTCATTTGAGAAAGTAACA
GGACTCATCAGATGTATACACAGCTTGATAGTGAATTTTTTTTATTTTTAATTTTTTTAT
TAAAGGTTTTACAAAAATAATTTTCATTTGAAAAAAAAAAAAAAGGA
clustalw multiple alignements is not computed in this case